RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 QSOX2Q6ZRP7 698 aa6.35□□□□□ -1.39
SMC5-203ENST00000475540 MMS22LQ6ZRQ5 1243 aa6.35□□□□□ -1.39
SMC5-203ENST00000475540 CHERPQ8IWX8 916 aaKnown RBP6.35□□□□□ -1.39
SMC5-203ENST00000475540 IL17REQ8NFR9 667 aa6.35□□□□□ -1.39
SMC5-203ENST00000475540 SECTM1Q8WVN6 248 aa6.35□□□□□ -1.39
SMC5-203ENST00000475540 CD101Q93033 1021 aa6.35□□□□□ -1.39
SMC5-203ENST00000475540 INPP4AQ96PE3 977 aaPredicted RBP6.35□□□□□ -1.39
SMC5-203ENST00000475540 EBF2Q9HAK2 575 aa6.35□□□□□ -1.39
SMC5-203ENST00000475540 DONSONQ9NYP3 566 aa6.35□□□□□ -1.39
SMC5-203ENST00000475540 C1RLQ9NZP8 487 aa6.35□□□□□ -1.39
SMC5-203ENST00000475540 INTS6Q9UL03 887 aaKnown RBP6.35□□□□□ -1.39
SMC5-203ENST00000475540 KCNS2Q9ULS6 477 aa6.35□□□□□ -1.39
SMC5-203ENST00000475540 DDNO94850 711 aaPredicted RBP6.34□□□□□ -1.39
SMC5-203ENST00000475540 BDKRB2P30411 391 aa6.34□□□□□ -1.39
SMC5-203ENST00000475540 CASP6P55212 293 aa6.34□□□□□ -1.39
SMC5-203ENST00000475540 HNRNPH2P55795 449 aaKnown RBP6.34□□□□□ -1.39
SMC5-203ENST00000475540 DLX5P56178 289 aa6.34□□□□□ -1.39
SMC5-203ENST00000475540 ZBTB17Q13105 803 aa6.34□□□□□ -1.39
SMC5-203ENST00000475540 ZRSR1Q15695 479 aaKnown RBP6.34□□□□□ -1.39
SMC5-203ENST00000475540 ALFQ53S48 1182 aa6.34□□□□□ -1.39
SMC5-203ENST00000475540 ATF7IPQ6VMQ6 1270 aa6.34□□□□□ -1.39
SMC5-203ENST00000475540 R3HCC1LQ7Z5L2 792 aaKnown RBP6.34□□□□□ -1.39
SMC5-203ENST00000475540 ZNF441Q8N8Z8 693 aa6.34□□□□□ -1.39
SMC5-203ENST00000475540 KIF9Q9HAQ2 790 aa6.34□□□□□ -1.39
SMC5-203ENST00000475540 TMEM98Q9Y2Y6 226 aa6.34□□□□□ -1.39
SMC5-203ENST00000475540 TCF20Q9UGU0 1960 aaKnown RBP6.33□□□□□ -1.4
SMC5-203ENST00000475540 CGNL1Q0VF96 1302 aa6.33□□□□□ -1.4
SMC5-203ENST00000475540 A0A1W2PPH5 198 aa6.33□□□□□ -1.4
SMC5-203ENST00000475540 AMD1P17707 334 aa6.33□□□□□ -1.4
SMC5-203ENST00000475540 DGKAP23743 735 aa6.33□□□□□ -1.4
SMC5-203ENST00000475540 MCM3P25205 808 aa6.33□□□□□ -1.4
SMC5-203ENST00000475540 IL15P40933 162 aaPredicted RBP6.33□□□□□ -1.4
SMC5-203ENST00000475540 RARSP54136 660 aaKnown RBP6.33□□□□□ -1.4
SMC5-203ENST00000475540 BRWD1-AS2P59051 145 aa6.33□□□□□ -1.4
SMC5-203ENST00000475540 TROAPQ12815 778 aa6.33□□□□□ -1.4
SMC5-203ENST00000475540 ILF3Q12906 894 aaKnown RBP eCLIP6.33□□□□□ -1.4
SMC5-203ENST00000475540 OLIG2Q13516 323 aa6.33□□□□□ -1.4
SMC5-203ENST00000475540 HIST2H2BCQ6DN03 193 aa6.33□□□□□ -1.4
SMC5-203ENST00000475540 HIST2H2BDQ6DRA6 164 aa6.33□□□□□ -1.4
SMC5-203ENST00000475540 SIGIRRQ6IA17 410 aa6.33□□□□□ -1.4
SMC5-203ENST00000475540 SATL1Q86VE3 508 aa6.33□□□□□ -1.4
SMC5-203ENST00000475540 MAB21L3Q8N8X9 362 aa6.33□□□□□ -1.4
SMC5-203ENST00000475540 SPATA22Q8NHS9 363 aa6.33□□□□□ -1.4
SMC5-203ENST00000475540 PSPC1Q8WXF1 523 aaKnown RBP6.33□□□□□ -1.4
SMC5-203ENST00000475540 FEM1CQ96JP0 617 aa6.33□□□□□ -1.4
SMC5-203ENST00000475540 EPYCQ99645 322 aa6.33□□□□□ -1.4
SMC5-203ENST00000475540 TMEM47Q9BQJ4 181 aa6.33□□□□□ -1.4
SMC5-203ENST00000475540 USP44Q9H0E7 712 aa6.33□□□□□ -1.4
SMC5-203ENST00000475540 MMP25Q9NPA2 562 aa6.33□□□□□ -1.4
SMC5-203ENST00000475540 TXLNGQ9NUQ3 528 aa6.33□□□□□ -1.4
SMC5-203ENST00000475540 POU2F3Q9UKI9 436 aa6.33□□□□□ -1.4
SMC5-203ENST00000475540 PDS5AQ29RF7 1337 aaKnown RBP6.32□□□□□ -1.4
SMC5-203ENST00000475540 FAM237AA0A1B0GTK4 181 aa6.32□□□□□ -1.4
SMC5-203ENST00000475540 ZNF587BE7ETH6 402 aa6.32□□□□□ -1.4
SMC5-203ENST00000475540 SEC14L2O76054 403 aa6.32□□□□□ -1.4
SMC5-203ENST00000475540 TMPOP42166 694 aaKnown RBP6.32□□□□□ -1.4
SMC5-203ENST00000475540 PIP4K2AP48426 406 aaPredicted RBP6.32□□□□□ -1.4
SMC5-203ENST00000475540 ZNF132P52740 706 aa6.32□□□□□ -1.4
SMC5-203ENST00000475540 PDE1BQ01064 536 aa6.32□□□□□ -1.4
SMC5-203ENST00000475540 ACSM2AQ08AH3 577 aa6.32□□□□□ -1.4
SMC5-203ENST00000475540 HYAL1Q12794 435 aa6.32□□□□□ -1.4
SMC5-203ENST00000475540 CCNG2Q16589 344 aa6.32□□□□□ -1.4
SMC5-203ENST00000475540 SYT16Q17RD7 645 aa6.32□□□□□ -1.4
SMC5-203ENST00000475540 ALG11Q2TAA5 492 aa6.32□□□□□ -1.4
SMC5-203ENST00000475540 KCNT1Q5JUK3 1230 aa6.32□□□□□ -1.4
SMC5-203ENST00000475540 IRAK1BP1Q5VVH5 260 aa6.32□□□□□ -1.4
SMC5-203ENST00000475540 TSSK4Q6SA08 328 aa6.32□□□□□ -1.4
SMC5-203ENST00000475540 C9orf139Q6ZV77 190 aa6.32□□□□□ -1.4
SMC5-203ENST00000475540 CNTROBQ8N137 903 aa6.32□□□□□ -1.4
SMC5-203ENST00000475540 NAXEQ8NCW5 288 aa6.32□□□□□ -1.4
SMC5-203ENST00000475540 LNX1Q8TBB1 728 aaPredicted RBP6.32□□□□□ -1.4
SMC5-203ENST00000475540 SMARCE1Q969G3 411 aa6.32□□□□□ -1.4
SMC5-203ENST00000475540 CDCA5Q96FF9 252 aa6.32□□□□□ -1.4
SMC5-203ENST00000475540 HARBI1Q96MB7 349 aa6.32□□□□□ -1.4
SMC5-203ENST00000475540 TCF7L2Q9NQB0 619 aa6.32□□□□□ -1.4
SMC5-203ENST00000475540 LOXL2Q9Y4K0 774 aa6.32□□□□□ -1.4
SMC5-203ENST00000475540 PSAT1Q9Y617 370 aa6.32□□□□□ -1.4
SMC5-203ENST00000475540 TAF1P21675 1872 aa6.32□□□□□ -1.4
SMC5-203ENST00000475540 FTCDO95954 541 aa6.31□□□□□ -1.4
SMC5-203ENST00000475540 IGKV3-20P01619 116 aa6.31□□□□□ -1.4
SMC5-203ENST00000475540 ATP1A3P13637 1013 aa6.31□□□□□ -1.4
SMC5-203ENST00000475540 ZNF182P17025 639 aaPredicted RBP6.31□□□□□ -1.4
SMC5-203ENST00000475540 RPL7AP62424 266 aaKnown RBP6.31□□□□□ -1.4
SMC5-203ENST00000475540 SLC20A2Q08357 652 aa6.31□□□□□ -1.4
SMC5-203ENST00000475540 G3BP1Q13283 466 aaKnown RBP eCLIP6.31□□□□□ -1.4
SMC5-203ENST00000475540 GPATCH4Q5T3I0 446 aaKnown RBP6.31□□□□□ -1.4
SMC5-203ENST00000475540 DUS1LQ6P1R4 473 aaKnown RBP6.31□□□□□ -1.4
SMC5-203ENST00000475540 DSTYKQ6XUX3 929 aa6.31□□□□□ -1.4
SMC5-203ENST00000475540 PQLC2Q6ZP29 291 aa6.31□□□□□ -1.4
SMC5-203ENST00000475540 CCDC13Q8IYE1 715 aa6.31□□□□□ -1.4
SMC5-203ENST00000475540 RNF113BQ8IZP6 322 aaKnown RBP6.31□□□□□ -1.4
SMC5-203ENST00000475540 METTL6Q8TCB7 284 aa6.31□□□□□ -1.4
SMC5-203ENST00000475540 TMEM68Q96MH6 324 aa6.31□□□□□ -1.4
SMC5-203ENST00000475540 MKLN1Q9UL63 735 aa6.31□□□□□ -1.4
SMC5-203ENST00000475540 CAPN7Q9Y6W3 813 aa6.31□□□□□ -1.4
SMC5-203ENST00000475540 BMPR1BO00238 502 aa6.3□□□□□ -1.4
SMC5-203ENST00000475540 CREB3O43889 395 aa6.3□□□□□ -1.4
SMC5-203ENST00000475540 IGLV2-11P01706 119 aa6.3□□□□□ -1.4
SMC5-203ENST00000475540 SPARCP09486 303 aa6.3□□□□□ -1.4
SMC5-203ENST00000475540 KRT10P13645 584 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms