RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 ELF4Q99607 663 aaPredicted RBP16.92■□□□□ 0.3
SCAF11-206ENST00000474828 LRRC40Q9H9A6 602 aa16.92■□□□□ 0.3
SCAF11-206ENST00000474828 ZFYVE1Q9HBF4 777 aa16.92■□□□□ 0.3
SCAF11-206ENST00000474828 TMEM9BQ9NQ34 198 aa16.92■□□□□ 0.3
SCAF11-206ENST00000474828 FSCN3Q9NQT6 498 aa16.92■□□□□ 0.3
SCAF11-206ENST00000474828 GDF3Q9NR23 364 aa16.92■□□□□ 0.3
SCAF11-206ENST00000474828 ZNF711Q9Y462 761 aa16.92■□□□□ 0.3
SCAF11-206ENST00000474828 DCHS1Q96JQ0 3298 aa16.91■□□□□ 0.3
SCAF11-206ENST00000474828 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.91■□□□□ 0.3
SCAF11-206ENST00000474828 A0A0U1RQS6 177 aa16.91■□□□□ 0.3
SCAF11-206ENST00000474828 C1orf232A0A0U1RR37 186 aa16.91■□□□□ 0.3
SCAF11-206ENST00000474828 A0A1B0GTQ1 180 aa16.91■□□□□ 0.3
SCAF11-206ENST00000474828 SLC30A4O14863 429 aa16.91■□□□□ 0.3
SCAF11-206ENST00000474828 PCDHGA12O60330 932 aa16.91■□□□□ 0.3
SCAF11-206ENST00000474828 PHF2O75151 1096 aa16.91■□□□□ 0.3
SCAF11-206ENST00000474828 SOD1P00441 154 aa16.91■□□□□ 0.3
SCAF11-206ENST00000474828 COILP38432 576 aaPredicted RBP16.91■□□□□ 0.3
SCAF11-206ENST00000474828 MAGEA6P43360 314 aa16.91■□□□□ 0.3
SCAF11-206ENST00000474828 KCNJ1P48048 391 aa16.91■□□□□ 0.3
SCAF11-206ENST00000474828 C21orf59P57076 290 aa16.91■□□□□ 0.3
SCAF11-206ENST00000474828 FZD2Q14332 565 aa16.91■□□□□ 0.3
SCAF11-206ENST00000474828 INPP5AQ14642 412 aa16.91■□□□□ 0.3
SCAF11-206ENST00000474828 ACOX1Q15067 660 aa16.91■□□□□ 0.3
SCAF11-206ENST00000474828 TPRG1LQ5T0D9 272 aa16.91■□□□□ 0.3
SCAF11-206ENST00000474828 PNCKQ6P2M8 343 aa16.91■□□□□ 0.3
SCAF11-206ENST00000474828 KANSL1Q7Z3B3 1105 aa16.91■□□□□ 0.3
SCAF11-206ENST00000474828 LYSMD3Q7Z3D4 306 aa16.91■□□□□ 0.3
SCAF11-206ENST00000474828 KDELC2Q7Z4H8 507 aa16.91■□□□□ 0.3
SCAF11-206ENST00000474828 PELI3Q8N2H9 469 aa16.91■□□□□ 0.3
SCAF11-206ENST00000474828 PLA2G15Q8NCC3 412 aa16.91■□□□□ 0.3
SCAF11-206ENST00000474828 NUS1Q96E22 293 aa16.91■□□□□ 0.3
SCAF11-206ENST00000474828 AP1M1Q9BXS5 423 aa16.91■□□□□ 0.3
SCAF11-206ENST00000474828 TEX101Q9BY14 249 aa16.91■□□□□ 0.3
SCAF11-206ENST00000474828 ABCG8Q9H221 673 aa16.91■□□□□ 0.3
SCAF11-206ENST00000474828 ETNK1Q9HBU6 452 aa16.91■□□□□ 0.3
SCAF11-206ENST00000474828 EIF2B3Q9NR50 452 aaKnown RBP16.91■□□□□ 0.3
SCAF11-206ENST00000474828 DLL3Q9NYJ7 618 aa16.91■□□□□ 0.3
SCAF11-206ENST00000474828 SMARCAL1Q9NZC9 954 aa16.91■□□□□ 0.3
SCAF11-206ENST00000474828 CEP250Q9BV73 2442 aa16.9■□□□□ 0.3
SCAF11-206ENST00000474828 GOLGA6CA6NDK9 693 aa16.9■□□□□ 0.3
SCAF11-206ENST00000474828 GOLGA6BA6NDN3 693 aa16.9■□□□□ 0.3
SCAF11-206ENST00000474828 YKT6O15498 198 aa16.9■□□□□ 0.3
SCAF11-206ENST00000474828 GOLGA6DP0CG33 693 aa16.9■□□□□ 0.3
SCAF11-206ENST00000474828 ETS1P14921 441 aa16.9■□□□□ 0.3
SCAF11-206ENST00000474828 TSHRP16473 764 aa16.9■□□□□ 0.3
SCAF11-206ENST00000474828 SDHBP21912 280 aa16.9■□□□□ 0.3
SCAF11-206ENST00000474828 KIAA1024LP59773 190 aa16.9■□□□□ 0.3
SCAF11-206ENST00000474828 HENMT1Q5T8I9 393 aaKnown RBP16.9■□□□□ 0.3
SCAF11-206ENST00000474828 ADAMTSL4Q6UY14 1074 aa16.9■□□□□ 0.3
SCAF11-206ENST00000474828 RFLNAQ6ZTI6 216 aa16.9■□□□□ 0.3
SCAF11-206ENST00000474828 MAGOHBQ96A72 148 aaKnown RBP16.9■□□□□ 0.3
SCAF11-206ENST00000474828 TBATAQ96M53 351 aa16.9■□□□□ 0.3
SCAF11-206ENST00000474828 MYOCQ99972 504 aa16.9■□□□□ 0.3
SCAF11-206ENST00000474828 TBL1YQ9BQ87 522 aa16.9■□□□□ 0.3
SCAF11-206ENST00000474828 APOOQ9BUR5 198 aa16.9■□□□□ 0.3
SCAF11-206ENST00000474828 FICDQ9BVA6 458 aa16.9■□□□□ 0.3
SCAF11-206ENST00000474828 FSD1LQ9BXM9 530 aa16.9■□□□□ 0.3
SCAF11-206ENST00000474828 GAREM1Q9H706 876 aa16.9■□□□□ 0.3
SCAF11-206ENST00000474828 RAD18Q9NS91 495 aa16.9■□□□□ 0.3
SCAF11-206ENST00000474828 GOLGA6AQ9NYA3 693 aa16.9■□□□□ 0.3
SCAF11-206ENST00000474828 IL17CQ9P0M4 197 aa16.9■□□□□ 0.3
SCAF11-206ENST00000474828 PCYOX1Q9UHG3 505 aa16.9■□□□□ 0.3
SCAF11-206ENST00000474828 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.89■□□□□ 0.29
SCAF11-206ENST00000474828 F5H423 210 aaPredicted RBP16.89■□□□□ 0.29
SCAF11-206ENST00000474828 K7ESM1 405 aa16.89■□□□□ 0.29
SCAF11-206ENST00000474828 PDE2AO00408 941 aaPredicted RBP16.89■□□□□ 0.29
SCAF11-206ENST00000474828 AURKAO14965 403 aa16.89■□□□□ 0.29
SCAF11-206ENST00000474828 PPFIA2O75334 1257 aa16.89■□□□□ 0.29
SCAF11-206ENST00000474828 IFNB1P01574 187 aa16.89■□□□□ 0.29
SCAF11-206ENST00000474828 TUBB4AP04350 444 aa16.89■□□□□ 0.29
SCAF11-206ENST00000474828 PYGLP06737 847 aa16.89■□□□□ 0.29
SCAF11-206ENST00000474828 ZSCAN5DPP0CG00 497 aa16.89■□□□□ 0.29
SCAF11-206ENST00000474828 CD59P13987 128 aa16.89■□□□□ 0.29
SCAF11-206ENST00000474828 CCDC137Q6PK04 289 aaKnown RBP16.89■□□□□ 0.29
SCAF11-206ENST00000474828 KDM7AQ6ZMT4 941 aa16.89■□□□□ 0.29
SCAF11-206ENST00000474828 MACC1Q6ZN28 852 aa16.89■□□□□ 0.29
SCAF11-206ENST00000474828 PIP4P1Q86T03 277 aa16.89■□□□□ 0.29
SCAF11-206ENST00000474828 LINC00523Q86TU6 105 aa16.89■□□□□ 0.29
SCAF11-206ENST00000474828 PDCD7Q8N8D1 485 aaKnown RBP16.89■□□□□ 0.29
SCAF11-206ENST00000474828 CCDC89Q8N998 374 aa16.89■□□□□ 0.29
SCAF11-206ENST00000474828 CCHCR1Q8TD31 782 aa16.89■□□□□ 0.29
SCAF11-206ENST00000474828 BRSK1Q8TDC3 778 aa16.89■□□□□ 0.29
SCAF11-206ENST00000474828 FUBP1Q96AE4 644 aaKnown RBP16.89■□□□□ 0.29
SCAF11-206ENST00000474828 PLEKHG4BQ96PX9 1271 aa16.89■□□□□ 0.29
SCAF11-206ENST00000474828 IL21RQ9HBE5 538 aa16.89■□□□□ 0.29
SCAF11-206ENST00000474828 PKD2L2Q9NZM6 624 aa16.89■□□□□ 0.29
SCAF11-206ENST00000474828 FNDC3AQ9Y2H6 1198 aaKnown RBP16.89■□□□□ 0.29
SCAF11-206ENST00000474828 GOLGA6L10A0A0M3HER8 536 aa16.88■□□□□ 0.29
SCAF11-206ENST00000474828 C4orf47A7E2U8 309 aa16.88■□□□□ 0.29
SCAF11-206ENST00000474828 TNFRSF10CO14798 259 aa16.88■□□□□ 0.29
SCAF11-206ENST00000474828 CSF2P04141 144 aa16.88■□□□□ 0.29
SCAF11-206ENST00000474828 PIRTP0C851 137 aa16.88■□□□□ 0.29
SCAF11-206ENST00000474828 NME1P15531 152 aaKnown RBP16.88■□□□□ 0.29
SCAF11-206ENST00000474828 ACTN2P35609 894 aa16.88■□□□□ 0.29
SCAF11-206ENST00000474828 CDK16Q00536 496 aa16.88■□□□□ 0.29
SCAF11-206ENST00000474828 EIF2B5Q13144 721 aaKnown RBP16.88■□□□□ 0.29
SCAF11-206ENST00000474828 OLIG2Q13516 323 aa16.88■□□□□ 0.29
SCAF11-206ENST00000474828 PTK2BQ14289 1009 aa16.88■□□□□ 0.29
SCAF11-206ENST00000474828 NFATC4Q14934 902 aa16.88■□□□□ 0.29
SCAF11-206ENST00000474828 PDPK2PQ6A1A2 396 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms