RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 OR13C4Q8NGS5 318 aa6.62□□□□□ -1.35
ATG4A-207ENST00000474825 GABPB2Q8TAK5 448 aaPredicted RBP6.62□□□□□ -1.35
ATG4A-207ENST00000474825 BLOC1S5Q8TDH9 187 aa6.62□□□□□ -1.35
ATG4A-207ENST00000474825 CYB5D2Q8WUJ1 264 aa6.62□□□□□ -1.35
ATG4A-207ENST00000474825 SORCS1Q8WY21 1168 aa6.62□□□□□ -1.35
ATG4A-207ENST00000474825 EZH1Q92800 747 aaPredicted RBP6.62□□□□□ -1.35
ATG4A-207ENST00000474825 DNASE1L2Q92874 299 aa6.62□□□□□ -1.35
ATG4A-207ENST00000474825 HDAC10Q969S8 669 aa6.62□□□□□ -1.35
ATG4A-207ENST00000474825 FAM131CQ96AQ9 280 aa6.62□□□□□ -1.35
ATG4A-207ENST00000474825 ZBTB9Q96C00 473 aa6.62□□□□□ -1.35
ATG4A-207ENST00000474825 RMDN1Q96DB5 314 aa6.62□□□□□ -1.35
ATG4A-207ENST00000474825 MSANTD3Q96H12 275 aa6.62□□□□□ -1.35
ATG4A-207ENST00000474825 SERAC1Q96JX3 654 aa6.62□□□□□ -1.35
ATG4A-207ENST00000474825 DNAJC1Q96KC8 554 aaKnown RBP6.62□□□□□ -1.35
ATG4A-207ENST00000474825 TBATAQ96M53 351 aa6.62□□□□□ -1.35
ATG4A-207ENST00000474825 FAM129BQ96TA1 746 aa6.62□□□□□ -1.35
ATG4A-207ENST00000474825 GPR22Q99680 433 aa6.62□□□□□ -1.35
ATG4A-207ENST00000474825 KXD1Q9BQD3 176 aa6.62□□□□□ -1.35
ATG4A-207ENST00000474825 PHF7Q9BWX1 381 aaPredicted RBP6.62□□□□□ -1.35
ATG4A-207ENST00000474825 CENPHQ9H3R5 247 aa6.62□□□□□ -1.35
ATG4A-207ENST00000474825 C8orf33Q9H7E9 229 aaPredicted RBP6.62□□□□□ -1.35
ATG4A-207ENST00000474825 FBRSL1Q9HCM7 1045 aaKnown RBP6.62□□□□□ -1.35
ATG4A-207ENST00000474825 TBK1Q9UHD2 729 aa6.62□□□□□ -1.35
ATG4A-207ENST00000474825 FBXO5Q9UKT4 447 aa6.62□□□□□ -1.35
ATG4A-207ENST00000474825 PPM1HQ9ULR3 514 aa6.62□□□□□ -1.35
ATG4A-207ENST00000474825 CORO1CQ9ULV4 474 aaPredicted RBP6.62□□□□□ -1.35
ATG4A-207ENST00000474825 PLA2G4CQ9UP65 541 aa6.62□□□□□ -1.35
ATG4A-207ENST00000474825 SLC8A2Q9UPR5 921 aa6.62□□□□□ -1.35
ATG4A-207ENST00000474825 ZNF711Q9Y462 761 aa6.62□□□□□ -1.35
ATG4A-207ENST00000474825 KCTD3Q9Y597 815 aa6.62□□□□□ -1.35
ATG4A-207ENST00000474825 ARL5AQ9Y689 179 aa6.62□□□□□ -1.35
ATG4A-207ENST00000474825 MUC22E2RYF6 1773 aaPredicted RBP6.62□□□□□ -1.35
ATG4A-207ENST00000474825 MYOFQ9NZM1 2061 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 EDDM13A0A1B0GTR0 161 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 TMEM120BA0PK00 339 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 CCDC162PA2VCL2 907 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 RGSL1A5PLK6 1076 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 FAM47DPA6NHR8 397 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 SHISA7A6NL88 538 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 FOXO6A8MYZ6 492 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 H3BQ06 376 aaPredicted RBP6.61□□□□□ -1.35
ATG4A-207ENST00000474825 K7EQS6 105 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 TM9SF1O15321 606 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 WISP3O95389 354 aaPredicted RBP6.61□□□□□ -1.35
ATG4A-207ENST00000474825 ASMTLO95671 621 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 GOT2P00505 430 aaKnown RBP6.61□□□□□ -1.35
ATG4A-207ENST00000474825 MT-ND3P03897 115 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 PRNPP04156 253 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 APODP05090 189 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 PRKCGP05129 697 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 PIRTP0C851 137 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 TIMP2P16035 220 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 KRT4P19013 534 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 FOXN2P32314 431 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 SLC1A2P43004 574 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 RECQLP46063 649 aaPredicted RBP6.61□□□□□ -1.35
ATG4A-207ENST00000474825 GALK1P51570 392 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 NEK3P51956 506 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 GYS2P54840 703 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 WDR4P57081 412 aaKnown RBP6.61□□□□□ -1.35
ATG4A-207ENST00000474825 CBX1P83916 185 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 CREB5Q02930 508 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 GABPB1Q06547 395 aaPredicted RBP6.61□□□□□ -1.35
ATG4A-207ENST00000474825 CAMK2GQ13555 558 aaPredicted RBP6.61□□□□□ -1.35
ATG4A-207ENST00000474825 PEX6Q13608 980 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 THOC5Q13769 683 aaKnown RBP6.61□□□□□ -1.35
ATG4A-207ENST00000474825 SEPT6Q14141 434 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 ELAVL3Q14576 367 aaKnown RBP6.61□□□□□ -1.35
ATG4A-207ENST00000474825 ZNF234Q14588 700 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 SMAD2Q15796 467 aaKnown RBP6.61□□□□□ -1.35
ATG4A-207ENST00000474825 ACCSLQ4AC99 568 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 ZNF805Q5CZA5 627 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 TMEM196Q5HYL7 178 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 ZDHHC20Q5W0Z9 365 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 NAIF1Q69YI7 327 aaPredicted RBP6.61□□□□□ -1.35
ATG4A-207ENST00000474825 AFTPHQ6ULP2 937 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 CRTC1Q6UUV9 634 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 RGS9BPQ6ZS82 235 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 EP400NLQ6ZTU2 488 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 USP45Q70EL2 814 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 GLT6D1Q7Z4J2 308 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 CCDC91Q7Z6B0 441 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 CLEC14AQ86T13 490 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 NLRP8Q86W28 1048 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 RALGPS2Q86X27 583 aaPredicted RBP6.61□□□□□ -1.35
ATG4A-207ENST00000474825 DENND6AQ8IWF6 608 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 SFTPA1Q8IWL2 248 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 SRRM1Q8IYB3 904 aaKnown RBP6.61□□□□□ -1.35
ATG4A-207ENST00000474825 NDUFAF2Q8N183 169 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 SLC44A3Q8N4M1 653 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 DCLK2Q8N568 766 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 OR4K2Q8NGD2 314 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 OR6K2Q8NGY2 324 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 OR4L1Q8NH43 312 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 UCMAQ8WVF2 138 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 VPS39Q96JC1 886 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 SMIM14Q96QK8 99 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 SMC6Q96SB8 1091 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 C1QTNF1Q9BXJ1 281 aa6.61□□□□□ -1.35
ATG4A-207ENST00000474825 CIPCQ9C0C6 399 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms