RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 CCL7P80098 99 aa18.54■□□□□ 0.56
COL7A1-209ENST00000474432 SKOR1P84550 965 aa18.54■□□□□ 0.56
COL7A1-209ENST00000474432 CDK3Q00526 305 aa18.54■□□□□ 0.56
COL7A1-209ENST00000474432 TLE3Q04726 772 aa18.54■□□□□ 0.56
COL7A1-209ENST00000474432 DPTQ07507 201 aa18.54■□□□□ 0.56
COL7A1-209ENST00000474432 C3orf38Q5JPI3 329 aa18.54■□□□□ 0.56
COL7A1-209ENST00000474432 LRRC66Q68CR7 880 aa18.54■□□□□ 0.56
COL7A1-209ENST00000474432 TIGD7Q6NT04 549 aaPredicted RBP18.54■□□□□ 0.56
COL7A1-209ENST00000474432 USP45Q70EL2 814 aa18.54■□□□□ 0.56
COL7A1-209ENST00000474432 TAF8Q7Z7C8 310 aa18.54■□□□□ 0.56
COL7A1-209ENST00000474432 B3GNT8Q7Z7M8 397 aa18.54■□□□□ 0.56
COL7A1-209ENST00000474432 C17orf82Q86X59 251 aaPredicted RBP18.54■□□□□ 0.56
COL7A1-209ENST00000474432 MAP7D3Q8IWC1 876 aa18.54■□□□□ 0.56
COL7A1-209ENST00000474432 SPACA3Q8IXA5 215 aa18.54■□□□□ 0.56
COL7A1-209ENST00000474432 LSMEM2Q8N112 164 aa18.54■□□□□ 0.56
COL7A1-209ENST00000474432 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.54■□□□□ 0.56
COL7A1-209ENST00000474432 CNTD1Q8N815 330 aa18.54■□□□□ 0.56
COL7A1-209ENST00000474432 RNF214Q8ND24 703 aa18.54■□□□□ 0.56
COL7A1-209ENST00000474432 FAM46DQ8NEK8 389 aa18.54■□□□□ 0.56
COL7A1-209ENST00000474432 WDR48Q8TAF3 677 aa18.54■□□□□ 0.56
COL7A1-209ENST00000474432 GPBAR1Q8TDU6 330 aa18.54■□□□□ 0.56
COL7A1-209ENST00000474432 HDAC11Q96DB2 347 aa18.54■□□□□ 0.56
COL7A1-209ENST00000474432 SLC46A1Q96NT5 459 aa18.54■□□□□ 0.56
COL7A1-209ENST00000474432 KCTD5Q9NXV2 234 aa18.54■□□□□ 0.56
COL7A1-209ENST00000474432 LCMT1Q9UIC8 334 aa18.54■□□□□ 0.56
COL7A1-209ENST00000474432 CHKBQ9Y259 395 aa18.54■□□□□ 0.56
COL7A1-209ENST00000474432 BPTFQ12830 3046 aa18.54■□□□□ 0.56
COL7A1-209ENST00000474432 ZNF487B1APH4 448 aa18.53■□□□□ 0.56
COL7A1-209ENST00000474432 RRP8O43159 456 aaKnown RBP18.53■□□□□ 0.56
COL7A1-209ENST00000474432 POLD2P49005 469 aa18.53■□□□□ 0.56
COL7A1-209ENST00000474432 ERVPABLB-1P60509 514 aa18.53■□□□□ 0.56
COL7A1-209ENST00000474432 ITKQ08881 620 aa18.53■□□□□ 0.56
COL7A1-209ENST00000474432 CCDC173Q0VFZ6 552 aa18.53■□□□□ 0.56
COL7A1-209ENST00000474432 HLTFQ14527 1009 aaKnown RBP eCLIP18.53■□□□□ 0.56
COL7A1-209ENST00000474432 CERCAMQ5T4B2 595 aa18.53■□□□□ 0.56
COL7A1-209ENST00000474432 SLC9A4Q6AI14 798 aa18.53■□□□□ 0.56
COL7A1-209ENST00000474432 LRRC69Q6ZNQ3 347 aa18.53■□□□□ 0.56
COL7A1-209ENST00000474432 SCAMP4Q969E2 229 aa18.53■□□□□ 0.56
COL7A1-209ENST00000474432 SCARF2Q96GP6 870 aaPredicted RBP18.53■□□□□ 0.56
COL7A1-209ENST00000474432 AGAP2Q99490 1192 aa18.53■□□□□ 0.56
COL7A1-209ENST00000474432 LGMNQ99538 433 aa18.53■□□□□ 0.56
COL7A1-209ENST00000474432 DEF6Q9H4E7 631 aa18.53■□□□□ 0.56
COL7A1-209ENST00000474432 PHPT1Q9NRX4 125 aaPredicted RBP18.53■□□□□ 0.56
COL7A1-209ENST00000474432 SPATS2LQ9NUQ6 558 aaKnown RBP18.53■□□□□ 0.56
COL7A1-209ENST00000474432 CD84Q9UIB8 345 aa18.53■□□□□ 0.56
COL7A1-209ENST00000474432 APPL1Q9UKG1 709 aa18.53■□□□□ 0.56
COL7A1-209ENST00000474432 SLC17A4Q9Y2C5 497 aa18.53■□□□□ 0.56
COL7A1-209ENST00000474432 PCDHGA8Q9Y5G5 932 aa18.53■□□□□ 0.56
COL7A1-209ENST00000474432 FASNP49327 2511 aaKnown RBP18.53■□□□□ 0.56
COL7A1-209ENST00000474432 PDE2AO00408 941 aaPredicted RBP18.52■□□□□ 0.56
COL7A1-209ENST00000474432 CES1P23141 567 aa18.52■□□□□ 0.56
COL7A1-209ENST00000474432 STC1P52823 247 aa18.52■□□□□ 0.56
COL7A1-209ENST00000474432 PPIDQ08752 370 aaKnown RBP18.52■□□□□ 0.56
COL7A1-209ENST00000474432 ZBTB17Q13105 803 aa18.52■□□□□ 0.56
COL7A1-209ENST00000474432 ARHGEF7Q14155 803 aa18.52■□□□□ 0.56
COL7A1-209ENST00000474432 SPIDRQ14159 915 aa18.52■□□□□ 0.56
COL7A1-209ENST00000474432 TCEAL1Q15170 157 aa18.52■□□□□ 0.56
COL7A1-209ENST00000474432 C14orf28Q4W4Y0 310 aa18.52■□□□□ 0.56
COL7A1-209ENST00000474432 NLRP8Q86W28 1048 aa18.52■□□□□ 0.56
COL7A1-209ENST00000474432 CCDC13Q8IYE1 715 aa18.52■□□□□ 0.56
COL7A1-209ENST00000474432 WDR24Q96S15 920 aa18.52■□□□□ 0.56
COL7A1-209ENST00000474432 LYSMD1Q96S90 227 aa18.52■□□□□ 0.56
COL7A1-209ENST00000474432 CARS2Q9HA77 564 aaKnown RBP18.52■□□□□ 0.56
COL7A1-209ENST00000474432 ZNHIT6Q9NWK9 470 aaKnown RBP18.52■□□□□ 0.56
COL7A1-209ENST00000474432 MOSPD1Q9UJG1 213 aa18.52■□□□□ 0.56
COL7A1-209ENST00000474432 SUFUQ9UMX1 484 aa18.52■□□□□ 0.56
COL7A1-209ENST00000474432 SSUH2Q9Y2M2 353 aa18.52■□□□□ 0.56
COL7A1-209ENST00000474432 RNF215Q9Y6U7 377 aa18.52■□□□□ 0.56
COL7A1-209ENST00000474432 MGAQ8IWI9 3026 aa18.51■□□□□ 0.55
COL7A1-209ENST00000474432 LRRD1A4D1F6 860 aa18.51■□□□□ 0.55
COL7A1-209ENST00000474432 CAPN8A6NHC0 703 aa18.51■□□□□ 0.55
COL7A1-209ENST00000474432 CDRT15L2A8MXV6 281 aa18.51■□□□□ 0.55
COL7A1-209ENST00000474432 D6RAR5 112 aa18.51■□□□□ 0.55
COL7A1-209ENST00000474432 KCNK1O00180 336 aa18.51■□□□□ 0.55
COL7A1-209ENST00000474432 JCHAINP01591 159 aa18.51■□□□□ 0.55
COL7A1-209ENST00000474432 FGF1P05230 155 aa18.51■□□□□ 0.55
COL7A1-209ENST00000474432 RPLP0P05388 317 aaKnown RBP18.51■□□□□ 0.55
COL7A1-209ENST00000474432 GLB1P16278 677 aa18.51■□□□□ 0.55
COL7A1-209ENST00000474432 MX2P20592 715 aa18.51■□□□□ 0.55
COL7A1-209ENST00000474432 NFKBIAP25963 317 aa18.51■□□□□ 0.55
COL7A1-209ENST00000474432 ARHGAP25P42331 645 aa18.51■□□□□ 0.55
COL7A1-209ENST00000474432 PCBP4P57723 403 aaKnown RBP18.51■□□□□ 0.55
COL7A1-209ENST00000474432 IFI35P80217 286 aaPredicted RBP18.51■□□□□ 0.55
COL7A1-209ENST00000474432 RAET1GQ6H3X3 334 aa18.51■□□□□ 0.55
COL7A1-209ENST00000474432 ADAMTSL4Q6UY14 1074 aa18.51■□□□□ 0.55
COL7A1-209ENST00000474432 TMPRSS9Q7Z410 1059 aa18.51■□□□□ 0.55
COL7A1-209ENST00000474432 VSIG1Q86XK7 387 aa18.51■□□□□ 0.55
COL7A1-209ENST00000474432 ZNF248Q8NDW4 579 aa18.51■□□□□ 0.55
COL7A1-209ENST00000474432 OR6C4Q8NGE1 309 aa18.51■□□□□ 0.55
COL7A1-209ENST00000474432 LIN37Q96GY3 246 aaPredicted RBP18.51■□□□□ 0.55
COL7A1-209ENST00000474432 CCDC42Q96M95 316 aa18.51■□□□□ 0.55
COL7A1-209ENST00000474432 LRRN3Q9H3W5 708 aa18.51■□□□□ 0.55
COL7A1-209ENST00000474432 TRNAU1APQ9NX07 287 aaKnown RBP18.51■□□□□ 0.55
COL7A1-209ENST00000474432 PLEKHM1Q9Y4G2 1056 aa18.51■□□□□ 0.55
COL7A1-209ENST00000474432 ZFC3H1O60293 1989 aaKnown RBP18.51■□□□□ 0.55
COL7A1-209ENST00000474432 B4DGG1 531 aa18.5■□□□□ 0.55
COL7A1-209ENST00000474432 IVLP07476 585 aa18.5■□□□□ 0.55
COL7A1-209ENST00000474432 PNLIPP16233 465 aa18.5■□□□□ 0.55
COL7A1-209ENST00000474432 AK4P27144 223 aaPredicted RBP18.5■□□□□ 0.55
COL7A1-209ENST00000474432 QPCTQ16769 361 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms