RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 FAM76AQ8TAV0 307 aa20.36■□□□□ 0.85
CDHR3-210ENST00000474330 SGSM3Q96HU1 749 aa20.36■□□□□ 0.85
CDHR3-210ENST00000474330 RBBP8Q99708 897 aa20.36■□□□□ 0.85
CDHR3-210ENST00000474330 MCMBPQ9BTE3 642 aa20.36■□□□□ 0.85
CDHR3-210ENST00000474330 ZDHHC4Q9NPG8 344 aa20.36■□□□□ 0.85
CDHR3-210ENST00000474330 POLR3BQ9NW08 1133 aaPredicted RBP20.36■□□□□ 0.85
CDHR3-210ENST00000474330 SARDHQ9UL12 918 aa20.36■□□□□ 0.85
CDHR3-210ENST00000474330 PKP3Q9Y446 797 aa20.36■□□□□ 0.85
CDHR3-210ENST00000474330 SCN8AQ9UQD0 1980 aa20.36■□□□□ 0.85
CDHR3-210ENST00000474330 A0A0U1RQS6 177 aa20.35■□□□□ 0.85
CDHR3-210ENST00000474330 HMX2A2RU54 273 aa20.35■□□□□ 0.85
CDHR3-210ENST00000474330 CCDC162PA2VCL2 907 aa20.35■□□□□ 0.85
CDHR3-210ENST00000474330 GOT2P00505 430 aaKnown RBP20.35■□□□□ 0.85
CDHR3-210ENST00000474330 SLC4A1P02730 911 aa20.35■□□□□ 0.85
CDHR3-210ENST00000474330 TIMP2P16035 220 aa20.35■□□□□ 0.85
CDHR3-210ENST00000474330 NR1D1P20393 614 aa20.35■□□□□ 0.85
CDHR3-210ENST00000474330 NFKBIAP25963 317 aa20.35■□□□□ 0.85
CDHR3-210ENST00000474330 SPRP35270 261 aaPredicted RBP20.35■□□□□ 0.85
CDHR3-210ENST00000474330 TCF15Q12870 199 aa20.35■□□□□ 0.85
CDHR3-210ENST00000474330 MLF2Q15773 248 aaPredicted RBP20.35■□□□□ 0.85
CDHR3-210ENST00000474330 FSTL4Q6MZW2 842 aa20.35■□□□□ 0.85
CDHR3-210ENST00000474330 PTAR1Q7Z6K3 402 aaPredicted RBP20.35■□□□□ 0.85
CDHR3-210ENST00000474330 DSG4Q86SJ6 1040 aa20.35■□□□□ 0.85
CDHR3-210ENST00000474330 DENND6AQ8IWF6 608 aa20.35■□□□□ 0.85
CDHR3-210ENST00000474330 SRRM1Q8IYB3 904 aaKnown RBP20.35■□□□□ 0.85
CDHR3-210ENST00000474330 C2CD4AQ8NCU7 369 aaPredicted RBP20.35■□□□□ 0.85
CDHR3-210ENST00000474330 GPR150Q8NGU9 434 aa20.35■□□□□ 0.85
CDHR3-210ENST00000474330 PIP4K2CQ8TBX8 421 aa20.35■□□□□ 0.85
CDHR3-210ENST00000474330 FAM3CQ92520 227 aa20.35■□□□□ 0.85
CDHR3-210ENST00000474330 SUDS3Q9H7L9 328 aaPredicted RBP20.35■□□□□ 0.85
CDHR3-210ENST00000474330 FBXO5Q9UKT4 447 aa20.35■□□□□ 0.85
CDHR3-210ENST00000474330 A0A1W2PPM1 405 aa20.35■□□□□ 0.85
CDHR3-210ENST00000474330 C16orf96A6NNT2 1141 aa20.35■□□□□ 0.85
CDHR3-210ENST00000474330 UPK3BL1B0FP48 263 aa20.35■□□□□ 0.85
CDHR3-210ENST00000474330 TRIM49D1C9J1S8 452 aa20.35■□□□□ 0.85
CDHR3-210ENST00000474330 UPK3BL2E5RIL1 263 aa20.35■□□□□ 0.85
CDHR3-210ENST00000474330 STK25O00506 426 aa20.35■□□□□ 0.85
CDHR3-210ENST00000474330 POLR3GO15318 223 aaPredicted RBP20.35■□□□□ 0.85
CDHR3-210ENST00000474330 CLDN7O95471 211 aa20.35■□□□□ 0.85
CDHR3-210ENST00000474330 EGFP01133 1207 aa20.35■□□□□ 0.85
CDHR3-210ENST00000474330 TIE1P35590 1138 aa20.35■□□□□ 0.85
CDHR3-210ENST00000474330 DNAJC3Q13217 504 aa20.35■□□□□ 0.85
CDHR3-210ENST00000474330 CTBP1Q13363 440 aa20.35■□□□□ 0.85
CDHR3-210ENST00000474330 ZNF470Q6ECI4 717 aa20.35■□□□□ 0.85
CDHR3-210ENST00000474330 GALNT7Q86SF2 657 aa20.35■□□□□ 0.85
CDHR3-210ENST00000474330 OR4L1Q8NH43 312 aa20.35■□□□□ 0.85
CDHR3-210ENST00000474330 FOXQ1Q9C009 403 aa20.35■□□□□ 0.85
CDHR3-210ENST00000474330 MTF2Q9Y483 593 aaPredicted RBP20.35■□□□□ 0.85
CDHR3-210ENST00000474330 OR51F1A6NGY5 319 aa20.34■□□□□ 0.85
CDHR3-210ENST00000474330 KPNA3O00505 521 aaPredicted RBP20.34■□□□□ 0.85
CDHR3-210ENST00000474330 MAN2B1O00754 1011 aa20.34■□□□□ 0.85
CDHR3-210ENST00000474330 AHSGP02765 367 aa20.34■□□□□ 0.85
CDHR3-210ENST00000474330 ITGA2BP08514 1039 aa20.34■□□□□ 0.85
CDHR3-210ENST00000474330 CYP2A6P11509 494 aaPredicted RBP20.34■□□□□ 0.85
CDHR3-210ENST00000474330 CD72P21854 359 aa20.34■□□□□ 0.85
CDHR3-210ENST00000474330 ITGB7P26010 798 aa20.34■□□□□ 0.85
CDHR3-210ENST00000474330 HPDP32754 393 aaPredicted RBP20.34■□□□□ 0.85
CDHR3-210ENST00000474330 SLC1A2P43004 574 aa20.34■□□□□ 0.85
CDHR3-210ENST00000474330 LIMK2P53671 638 aa20.34■□□□□ 0.85
CDHR3-210ENST00000474330 SEC13P55735 322 aa20.34■□□□□ 0.85
CDHR3-210ENST00000474330 PPP2R2AP63151 447 aa20.34■□□□□ 0.85
CDHR3-210ENST00000474330 PRKCQQ04759 706 aa20.34■□□□□ 0.85
CDHR3-210ENST00000474330 CAMK2GQ13555 558 aaPredicted RBP20.34■□□□□ 0.85
CDHR3-210ENST00000474330 MROH9Q5TGP6 573 aa20.34■□□□□ 0.85
CDHR3-210ENST00000474330 AFTPHQ6ULP2 937 aa20.34■□□□□ 0.85
CDHR3-210ENST00000474330 TIFABQ6ZNK6 161 aa20.34■□□□□ 0.85
CDHR3-210ENST00000474330 TTC7BQ86TV6 843 aa20.34■□□□□ 0.85
CDHR3-210ENST00000474330 TSPAN33Q86UF1 283 aa20.34■□□□□ 0.85
CDHR3-210ENST00000474330 CILP2Q8IUL8 1156 aa20.34■□□□□ 0.85
CDHR3-210ENST00000474330 ARFGAP2Q8N6H7 521 aa20.34■□□□□ 0.85
CDHR3-210ENST00000474330 BPIFA1Q9NP55 256 aa20.34■□□□□ 0.85
CDHR3-210ENST00000474330 DLGAP2Q9P1A6 1054 aa20.34■□□□□ 0.85
CDHR3-210ENST00000474330 B4GALT6Q9UBX8 382 aa20.34■□□□□ 0.85
CDHR3-210ENST00000474330 FKBPLQ9UIM3 349 aa20.34■□□□□ 0.85
CDHR3-210ENST00000474330 ZNF106Q9H2Y7 1883 aaKnown RBP20.33■□□□□ 0.85
CDHR3-210ENST00000474330 CD3EAPO15446 510 aaKnown RBP20.33■□□□□ 0.84
CDHR3-210ENST00000474330 MT-ND3P03897 115 aa20.33■□□□□ 0.84
CDHR3-210ENST00000474330 CREB1P16220 341 aa20.33■□□□□ 0.84
CDHR3-210ENST00000474330 LHCGRP22888 699 aa20.33■□□□□ 0.84
CDHR3-210ENST00000474330 GABRB3P28472 473 aa20.33■□□□□ 0.84
CDHR3-210ENST00000474330 BMPR2Q13873 1038 aa20.33■□□□□ 0.84
CDHR3-210ENST00000474330 LRRC66Q68CR7 880 aa20.33■□□□□ 0.84
CDHR3-210ENST00000474330 MRNIPQ6NTE8 343 aa20.33■□□□□ 0.84
CDHR3-210ENST00000474330 KDM7AQ6ZMT4 941 aa20.33■□□□□ 0.84
CDHR3-210ENST00000474330 MICALCLQ6ZW33 695 aa20.33■□□□□ 0.84
CDHR3-210ENST00000474330 PARS2Q7L3T8 475 aaKnown RBP20.33■□□□□ 0.84
CDHR3-210ENST00000474330 ZC3HC1Q86WB0 502 aaKnown RBP20.33■□□□□ 0.84
CDHR3-210ENST00000474330 CBARPQ8N350 705 aaPredicted RBP20.33■□□□□ 0.84
CDHR3-210ENST00000474330 SCG3Q8WXD2 468 aaKnown RBP20.33■□□□□ 0.84
CDHR3-210ENST00000474330 PPP1R16AQ96I34 528 aa20.33■□□□□ 0.84
CDHR3-210ENST00000474330 SMC6Q96SB8 1091 aa20.33■□□□□ 0.84
CDHR3-210ENST00000474330 RHOJQ9H4E5 214 aa20.33■□□□□ 0.84
CDHR3-210ENST00000474330 CATSPERZQ9NTU4 200 aa20.33■□□□□ 0.84
CDHR3-210ENST00000474330 KANSL1LA0AUZ9 987 aa20.32■□□□□ 0.84
CDHR3-210ENST00000474330 A8MX80 341 aa20.32■□□□□ 0.84
CDHR3-210ENST00000474330 C1QTNF3-AMACRE9PGA6 284 aa20.32■□□□□ 0.84
CDHR3-210ENST00000474330 IL1BP01584 269 aa20.32■□□□□ 0.84
CDHR3-210ENST00000474330 DCNP07585 359 aaKnown RBP20.32■□□□□ 0.84
CDHR3-210ENST00000474330 BRAFP15056 766 aa20.32■□□□□ 0.84
CDHR3-210ENST00000474330 ZNF30P17039 623 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms