RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 GAREM1Q9H706 876 aa3.64□□□□□ -1.83
TMEM50B-208ENST00000474272 DDX4Q9NQI0 724 aaKnown RBP3.64□□□□□ -1.83
TMEM50B-208ENST00000474272 DIAPH3Q9NSV4 1193 aa3.64□□□□□ -1.83
TMEM50B-208ENST00000474272 IL36RNQ9UBH0 155 aa3.64□□□□□ -1.83
TMEM50B-208ENST00000474272 FAM96BQ9Y3D0 163 aa3.64□□□□□ -1.83
TMEM50B-208ENST00000474272 ADAM18Q9Y3Q7 739 aa3.64□□□□□ -1.83
TMEM50B-208ENST00000474272 LIPT2A6NK58 231 aa3.63□□□□□ -1.83
TMEM50B-208ENST00000474272 LRRC53A6NM62 1247 aa3.63□□□□□ -1.83
TMEM50B-208ENST00000474272 USP17L23D6RBM5 183 aa3.63□□□□□ -1.83
TMEM50B-208ENST00000474272 ZBED4O75132 1171 aa3.63□□□□□ -1.83
TMEM50B-208ENST00000474272 RGS11O94810 467 aa3.63□□□□□ -1.83
TMEM50B-208ENST00000474272 TFPIP10646 304 aa3.63□□□□□ -1.83
TMEM50B-208ENST00000474272 ETFAP13804 333 aa3.63□□□□□ -1.83
TMEM50B-208ENST00000474272 AGAP20933 346 aa3.63□□□□□ -1.83
TMEM50B-208ENST00000474272 BDNFP23560 247 aa3.63□□□□□ -1.83
TMEM50B-208ENST00000474272 C21orf33P30042 268 aaPredicted RBP3.63□□□□□ -1.83
TMEM50B-208ENST00000474272 TM4SF1P30408 202 aa3.63□□□□□ -1.83
TMEM50B-208ENST00000474272 CDAP32320 146 aa3.63□□□□□ -1.83
TMEM50B-208ENST00000474272 SHMT1P34896 483 aa3.63□□□□□ -1.83
TMEM50B-208ENST00000474272 GABRB2P47870 512 aa3.63□□□□□ -1.83
TMEM50B-208ENST00000474272 PIP4K2AP48426 406 aaPredicted RBP3.63□□□□□ -1.83
TMEM50B-208ENST00000474272 DRG2P55039 364 aaKnown RBP3.63□□□□□ -1.83
TMEM50B-208ENST00000474272 ARL16Q0P5N6 197 aa3.63□□□□□ -1.83
TMEM50B-208ENST00000474272 ILF3Q12906 894 aaKnown RBP eCLIP3.63□□□□□ -1.83
TMEM50B-208ENST00000474272 SOWAHAQ2M3V2 549 aa3.63□□□□□ -1.83
TMEM50B-208ENST00000474272 TCTN1Q2MV58 587 aa3.63□□□□□ -1.83
TMEM50B-208ENST00000474272 STPG1Q5TH74 334 aa3.63□□□□□ -1.83
TMEM50B-208ENST00000474272 FAM205BPQ63HN1 556 aa3.63□□□□□ -1.83
TMEM50B-208ENST00000474272 TTI2Q6NXR4 508 aa3.63□□□□□ -1.83
TMEM50B-208ENST00000474272 SFTPA2Q8IWL1 248 aa3.63□□□□□ -1.83
TMEM50B-208ENST00000474272 POC1AQ8NBT0 407 aa3.63□□□□□ -1.83
TMEM50B-208ENST00000474272 NEK9Q8TD19 979 aa3.63□□□□□ -1.83
TMEM50B-208ENST00000474272 USP6NLQ92738 828 aa3.63□□□□□ -1.83
TMEM50B-208ENST00000474272 FAM149B1Q96BN6 582 aa3.63□□□□□ -1.83
TMEM50B-208ENST00000474272 ADGRG7Q96K78 797 aa3.63□□□□□ -1.83
TMEM50B-208ENST00000474272 PRKRIP1Q9H875 184 aaPredicted RBP3.63□□□□□ -1.83
TMEM50B-208ENST00000474272 POLR1BQ9H9Y6 1135 aa3.63□□□□□ -1.83
TMEM50B-208ENST00000474272 CYSLTR2Q9NS75 346 aa3.63□□□□□ -1.83
TMEM50B-208ENST00000474272 FBXO9Q9UK97 447 aaPredicted RBP3.63□□□□□ -1.83
TMEM50B-208ENST00000474272 LSM4Q9Y4Z0 139 aaKnown RBP3.63□□□□□ -1.83
TMEM50B-208ENST00000474272 WDR81Q562E7 1941 aa3.63□□□□□ -1.83
TMEM50B-208ENST00000474272 FAM237BA0A1B0GVD1 139 aa3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 TTC36A6NLP5 189 aa3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 CHL1O00533 1208 aa3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 SEC14L5O43304 696 aa3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 XPNPEP2O43895 674 aa3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 HOXB5P09067 269 aa3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 NFKBIAP25963 317 aa3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 ARL3P36405 182 aa3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 F2RL1P55085 397 aa3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 ARF3P61204 181 aaPredicted RBP3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 ARF1P84077 181 aaKnown RBP3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 MYBPHQ13203 477 aa3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 MAMLD1Q13495 774 aa3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 FRG1Q14331 258 aaKnown RBP3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 CCNG2Q16589 344 aa3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 MEA1Q16626 185 aa3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 SGO1Q5FBB7 561 aa3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 CXorf66Q5JRM2 361 aaPredicted RBP3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 ITPRIPL1Q6GPH6 555 aa3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 NCEH1Q6PIU2 408 aa3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 FBXO46Q6PJ61 603 aaPredicted RBP3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 CPLX2Q6PUV4 134 aaKnown RBP3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 TSSK4Q6SA08 328 aa3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 PATL1Q86TB9 770 aaKnown RBP3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 MB21D2Q8IYB1 491 aaPredicted RBP3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 FRMD1Q8N878 549 aa3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 ARRDC2Q8TBH0 407 aa3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 ERGIC1Q969X5 290 aa3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 FBXL8Q96CD0 374 aa3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 MMABQ96EY8 250 aaPredicted RBP3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 TXNDC15Q96J42 360 aa3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 MAP7D2Q96T17 732 aa3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 EPYCQ99645 322 aa3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 KIF9Q9HAQ2 790 aa3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 CLK4Q9HAZ1 481 aaKnown RBP3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 MAGEE1Q9HCI5 957 aa3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 FBRSL1Q9HCM7 1045 aaKnown RBP3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 BPIFA1Q9NP55 256 aa3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 ASAH2Q9NR71 780 aa3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 SMYD2Q9NRG4 433 aa3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 SEPT11Q9NVA2 429 aaKnown RBP3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 HAO1Q9UJM8 370 aa3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 CORO1CQ9ULV4 474 aaPredicted RBP3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 SRPRBQ9Y5M8 271 aaKnown RBP3.62□□□□□ -1.83
TMEM50B-208ENST00000474272 SAA2-SAA4A0A096LPE2 208 aa3.61□□□□□ -1.83
TMEM50B-208ENST00000474272 IGHV4-28A0A0C4DH34 117 aa3.61□□□□□ -1.83
TMEM50B-208ENST00000474272 A0A1W2PRG0 241 aa3.61□□□□□ -1.83
TMEM50B-208ENST00000474272 ANKRD18BA2A2Z9 1011 aa3.61□□□□□ -1.83
TMEM50B-208ENST00000474272 KDM4EB2RXH2 506 aaPredicted RBP3.61□□□□□ -1.83
TMEM50B-208ENST00000474272 EIF3CLB5ME19 914 aaKnown RBP3.61□□□□□ -1.83
TMEM50B-208ENST00000474272 PRAC2D3DTV9 90 aa3.61□□□□□ -1.83
TMEM50B-208ENST00000474272 GFPT2O94808 682 aa3.61□□□□□ -1.83
TMEM50B-208ENST00000474272 PAK4O96013 591 aaPredicted RBP3.61□□□□□ -1.83
TMEM50B-208ENST00000474272 EIF2S1P05198 315 aaKnown RBP3.61□□□□□ -1.83
TMEM50B-208ENST00000474272 MYF6P23409 242 aa3.61□□□□□ -1.83
TMEM50B-208ENST00000474272 HADHAP40939 763 aa3.61□□□□□ -1.83
TMEM50B-208ENST00000474272 ST3GAL1Q11201 340 aa3.61□□□□□ -1.83
TMEM50B-208ENST00000474272 CSTF3Q12996 717 aaKnown RBP3.61□□□□□ -1.83
TMEM50B-208ENST00000474272 CTTNQ14247 550 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms