RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 ELP6Q0PNE2 266 aa20.27■□□□□ 0.83
APP-215ENST00000474136 EFHC2Q5JST6 749 aa20.27■□□□□ 0.83
APP-215ENST00000474136 TMEM164Q5U3C3 297 aa20.27■□□□□ 0.83
APP-215ENST00000474136 DNAJC24Q6P3W2 148 aa20.27■□□□□ 0.83
APP-215ENST00000474136 ZNF354CQ86Y25 554 aa20.27■□□□□ 0.83
APP-215ENST00000474136 ATL2Q8NHH9 583 aa20.27■□□□□ 0.83
APP-215ENST00000474136 SLC35G2Q8TBE7 412 aa20.27■□□□□ 0.83
APP-215ENST00000474136 FUBP1Q96AE4 644 aaKnown RBP20.27■□□□□ 0.83
APP-215ENST00000474136 HMCESQ96FZ2 354 aa20.27■□□□□ 0.83
APP-215ENST00000474136 EXOC2Q96KP1 924 aa20.27■□□□□ 0.83
APP-215ENST00000474136 NUDT22Q9BRQ3 303 aa20.27■□□□□ 0.83
APP-215ENST00000474136 TMEM168Q9H0V1 697 aa20.27■□□□□ 0.83
APP-215ENST00000474136 DPEP2Q9H4A9 486 aa20.27■□□□□ 0.83
APP-215ENST00000474136 TMEM51Q9NW97 253 aa20.27■□□□□ 0.83
APP-215ENST00000474136 CTTNBP2NLQ9P2B4 639 aa20.27■□□□□ 0.83
APP-215ENST00000474136 GUCA1BQ9UMX6 200 aa20.27■□□□□ 0.83
APP-215ENST00000474136 MFHAS1Q9Y4C4 1052 aa20.27■□□□□ 0.83
APP-215ENST00000474136 LRRK1Q38SD2 2015 aa20.26■□□□□ 0.83
APP-215ENST00000474136 USP9YO00507 2555 aaPredicted RBP20.26■□□□□ 0.83
APP-215ENST00000474136 RCCD1A6NED2 376 aa20.26■□□□□ 0.83
APP-215ENST00000474136 KIF2AO00139 706 aaPredicted RBP20.26■□□□□ 0.83
APP-215ENST00000474136 KIF5CO60282 957 aa20.26■□□□□ 0.83
APP-215ENST00000474136 MTA2O94776 668 aa20.26■□□□□ 0.83
APP-215ENST00000474136 LRIG2O94898 1065 aa20.26■□□□□ 0.83
APP-215ENST00000474136 LIFP15018 202 aa20.26■□□□□ 0.83
APP-215ENST00000474136 CASRP41180 1078 aa20.26■□□□□ 0.83
APP-215ENST00000474136 NOP2P46087 812 aaKnown RBP20.26■□□□□ 0.83
APP-215ENST00000474136 LIG3P49916 1009 aa20.26■□□□□ 0.83
APP-215ENST00000474136 NAP1L1P55209 391 aaKnown RBP20.26■□□□□ 0.83
APP-215ENST00000474136 MAZP56270 477 aaKnown RBP20.26■□□□□ 0.83
APP-215ENST00000474136 OR1D5P58170 312 aa20.26■□□□□ 0.83
APP-215ENST00000474136 NRG1Q02297 640 aaPredicted RBP20.26■□□□□ 0.83
APP-215ENST00000474136 CDO1Q16878 200 aa20.26■□□□□ 0.83
APP-215ENST00000474136 C15orf59Q2T9L4 293 aaPredicted RBP20.26■□□□□ 0.83
APP-215ENST00000474136 ARCQ7LC44 396 aa20.26■□□□□ 0.83
APP-215ENST00000474136 PIM3Q86V86 326 aa20.26■□□□□ 0.83
APP-215ENST00000474136 SELENOOQ9BVL4 669 aa20.26■□□□□ 0.83
APP-215ENST00000474136 B3GNT4Q9C0J1 378 aa20.26■□□□□ 0.83
APP-215ENST00000474136 NOL6Q9H6R4 1146 aaKnown RBP20.26■□□□□ 0.83
APP-215ENST00000474136 CHD5Q8TDI0 1954 aa20.25■□□□□ 0.83
APP-215ENST00000474136 SIGLEC16A6NMB1 481 aa20.25■□□□□ 0.83
APP-215ENST00000474136 NUDT21O43809 227 aaKnown RBP20.25■□□□□ 0.83
APP-215ENST00000474136 FGF3P11487 239 aaPredicted RBP20.25■□□□□ 0.83
APP-215ENST00000474136 DESP17661 470 aa20.25■□□□□ 0.83
APP-215ENST00000474136 ARHGAP25P42331 645 aa20.25■□□□□ 0.83
APP-215ENST00000474136 ATP1A2P50993 1020 aa20.25■□□□□ 0.83
APP-215ENST00000474136 MAMLD1Q13495 774 aa20.25■□□□□ 0.83
APP-215ENST00000474136 MTM1Q13496 603 aa20.25■□□□□ 0.83
APP-215ENST00000474136 UGP2Q16851 508 aa20.25■□□□□ 0.83
APP-215ENST00000474136 IL22RA1Q8N6P7 574 aa20.25■□□□□ 0.83
APP-215ENST00000474136 TRIM58Q8NG06 486 aa20.25■□□□□ 0.83
APP-215ENST00000474136 OR56A4Q8NGH8 313 aa20.25■□□□□ 0.83
APP-215ENST00000474136 TBC1D31Q96DN5 1066 aa20.25■□□□□ 0.83
APP-215ENST00000474136 ALS2CR12Q96Q35 445 aa20.25■□□□□ 0.83
APP-215ENST00000474136 NUP85Q9BW27 656 aa20.25■□□□□ 0.83
APP-215ENST00000474136 ZNF71Q9NQZ8 489 aaPredicted RBP20.25■□□□□ 0.83
APP-215ENST00000474136 METTL5Q9NRN9 209 aaKnown RBP20.25■□□□□ 0.83
APP-215ENST00000474136 AKAP7Q9P0M2 348 aaPredicted RBP20.25■□□□□ 0.83
APP-215ENST00000474136 LHX3Q9UBR4 397 aa20.25■□□□□ 0.83
APP-215ENST00000474136 NOTCH2Q04721 2471 aa20.24■□□□□ 0.83
APP-215ENST00000474136 SPTAN1Q13813 2472 aaKnown RBP20.24■□□□□ 0.83
APP-215ENST00000474136 CPNE6O95741 557 aa20.24■□□□□ 0.83
APP-215ENST00000474136 KRT3P12035 628 aa20.24■□□□□ 0.83
APP-215ENST00000474136 ALDH4A1P30038 563 aa20.24■□□□□ 0.83
APP-215ENST00000474136 DCUN1D2Q6PH85 259 aa20.24■□□□□ 0.83
APP-215ENST00000474136 PHLDB2Q86SQ0 1253 aa20.24■□□□□ 0.83
APP-215ENST00000474136 ZSWIM9Q86XI8 627 aa20.24■□□□□ 0.83
APP-215ENST00000474136 SYCE1Q8N0S2 351 aa20.24■□□□□ 0.83
APP-215ENST00000474136 TAAR9Q96RI9 348 aa20.24■□□□□ 0.83
APP-215ENST00000474136 NCAPGQ9BPX3 1015 aa20.24■□□□□ 0.83
APP-215ENST00000474136 B3GALT1Q9Y5Z6 326 aa20.24■□□□□ 0.83
APP-215ENST00000474136 IGHV5-10-1A0A0J9YXX1 117 aa20.23■□□□□ 0.83
APP-215ENST00000474136 MACROD2A1Z1Q3 448 aa20.23■□□□□ 0.83
APP-215ENST00000474136 ZSCAN5CA6NGD5 496 aaPredicted RBP20.23■□□□□ 0.83
APP-215ENST00000474136 USP27XA6NNY8 438 aa20.23■□□□□ 0.83
APP-215ENST00000474136 MYO1FO00160 1098 aa20.23■□□□□ 0.83
APP-215ENST00000474136 ZNF500O60304 480 aaPredicted RBP20.23■□□□□ 0.83
APP-215ENST00000474136 UGT1A3P35503 534 aa20.23■□□□□ 0.83
APP-215ENST00000474136 MMP12P39900 470 aa20.23■□□□□ 0.83
APP-215ENST00000474136 CCR10P46092 362 aa20.23■□□□□ 0.83
APP-215ENST00000474136 SUOXP51687 545 aa20.23■□□□□ 0.83
APP-215ENST00000474136 KIAA1024LP59773 190 aa20.23■□□□□ 0.83
APP-215ENST00000474136 AGERQ15109 404 aa20.23■□□□□ 0.83
APP-215ENST00000474136 CYTH1Q15438 398 aa20.23■□□□□ 0.83
APP-215ENST00000474136 CCDC185Q8N715 623 aa20.23■□□□□ 0.83
APP-215ENST00000474136 CCDC74BQ96LY2 380 aa20.23■□□□□ 0.83
APP-215ENST00000474136 PSMG3-AS1Q96PY0 264 aa20.23■□□□□ 0.83
APP-215ENST00000474136 LGR4Q9BXB1 951 aa20.23■□□□□ 0.83
APP-215ENST00000474136 SUV39H2Q9H5I1 410 aa20.23■□□□□ 0.83
APP-215ENST00000474136 RETREG1Q9H6L5 497 aa20.23■□□□□ 0.83
APP-215ENST00000474136 CYP4F12Q9HCS2 524 aa20.23■□□□□ 0.83
APP-215ENST00000474136 SPATS2LQ9NUQ6 558 aaKnown RBP20.23■□□□□ 0.83
APP-215ENST00000474136 MOSPD1Q9UJG1 213 aa20.23■□□□□ 0.83
APP-215ENST00000474136 TUBD1Q9UJT1 453 aa20.23■□□□□ 0.83
APP-215ENST00000474136 DUSP10Q9Y6W6 482 aa20.23■□□□□ 0.83
APP-215ENST00000474136 TCRBV5S1A1TA0A578 114 aa20.22■□□□□ 0.83
APP-215ENST00000474136 TSPAN11A1L157 253 aa20.22■□□□□ 0.83
APP-215ENST00000474136 CACNB4O00305 520 aaPredicted RBP20.22■□□□□ 0.83
APP-215ENST00000474136 CCDC14Q49A88 953 aa20.22■□□□□ 0.83
APP-215ENST00000474136 INO80DQ53TQ3 878 aaPredicted RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms