RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 STPG1Q5TH74 334 aa12.4□□□□□ -0.42
DDX56-209ENST00000473924 RAET1GQ6H3X3 334 aa12.4□□□□□ -0.42
DDX56-209ENST00000473924 ESRP1Q6NXG1 681 aaKnown RBP12.4□□□□□ -0.42
DDX56-209ENST00000473924 TTC27Q6P3X3 843 aa12.4□□□□□ -0.42
DDX56-209ENST00000473924 RANBP10Q6VN20 620 aa12.4□□□□□ -0.42
DDX56-209ENST00000473924 KDM7AQ6ZMT4 941 aa12.4□□□□□ -0.42
DDX56-209ENST00000473924 GLT6D1Q7Z4J2 308 aa12.4□□□□□ -0.42
DDX56-209ENST00000473924 TECPR1Q7Z6L1 1165 aa12.4□□□□□ -0.42
DDX56-209ENST00000473924 LINC00523Q86TU6 105 aa12.4□□□□□ -0.42
DDX56-209ENST00000473924 CREG2Q8IUH2 290 aa12.4□□□□□ -0.42
DDX56-209ENST00000473924 CBARPQ8N350 705 aaPredicted RBP12.4□□□□□ -0.42
DDX56-209ENST00000473924 OXR1Q8N573 874 aa12.4□□□□□ -0.42
DDX56-209ENST00000473924 GLIS1Q8NBF1 620 aa12.4□□□□□ -0.42
DDX56-209ENST00000473924 PLA2G15Q8NCC3 412 aa12.4□□□□□ -0.42
DDX56-209ENST00000473924 NETO1Q8TDF5 533 aa12.4□□□□□ -0.42
DDX56-209ENST00000473924 GRK7Q8WTQ7 553 aa12.4□□□□□ -0.42
DDX56-209ENST00000473924 AP2M1Q96CW1 435 aa12.4□□□□□ -0.42
DDX56-209ENST00000473924 TRABDQ9H4I3 376 aa12.4□□□□□ -0.42
DDX56-209ENST00000473924 RNF14Q9UBS8 474 aa12.4□□□□□ -0.42
DDX56-209ENST00000473924 OR1A2Q9Y585 309 aa12.4□□□□□ -0.42
DDX56-209ENST00000473924 SPO11Q9Y5K1 396 aa12.4□□□□□ -0.42
DDX56-209ENST00000473924 PCDH15Q96QU1 1955 aa12.39□□□□□ -0.43
DDX56-209ENST00000473924 WDR87Q6ZQQ6 2873 aa12.39□□□□□ -0.43
DDX56-209ENST00000473924 RGSL1A5PLK6 1076 aa12.39□□□□□ -0.43
DDX56-209ENST00000473924 CACNB4O00305 520 aaPredicted RBP12.39□□□□□ -0.43
DDX56-209ENST00000473924 CDX4O14627 284 aaPredicted RBP12.39□□□□□ -0.43
DDX56-209ENST00000473924 FANCGO15287 622 aa12.39□□□□□ -0.43
DDX56-209ENST00000473924 AP2A1O95782 977 aa12.39□□□□□ -0.43
DDX56-209ENST00000473924 GAS8O95995 478 aa12.39□□□□□ -0.43
DDX56-209ENST00000473924 KRT14P02533 472 aa12.39□□□□□ -0.43
DDX56-209ENST00000473924 APRTP07741 180 aa12.39□□□□□ -0.43
DDX56-209ENST00000473924 TSHRP16473 764 aa12.39□□□□□ -0.43
DDX56-209ENST00000473924 HTR1BP28222 390 aa12.39□□□□□ -0.43
DDX56-209ENST00000473924 GPR1P46091 355 aa12.39□□□□□ -0.43
DDX56-209ENST00000473924 SPINT3P49223 89 aa12.39□□□□□ -0.43
DDX56-209ENST00000473924 FNTAP49354 379 aa12.39□□□□□ -0.43
DDX56-209ENST00000473924 ARRB1P49407 418 aaPredicted RBP12.39□□□□□ -0.43
DDX56-209ENST00000473924 TRIP13Q15645 432 aaPredicted RBP12.39□□□□□ -0.43
DDX56-209ENST00000473924 KCTD11Q693B1 232 aa12.39□□□□□ -0.43
DDX56-209ENST00000473924 PNCKQ6P2M8 343 aa12.39□□□□□ -0.43
DDX56-209ENST00000473924 PPP1R21Q6ZMI0 780 aa12.39□□□□□ -0.43
DDX56-209ENST00000473924 NYAP1Q6ZVC0 841 aa12.39□□□□□ -0.43
DDX56-209ENST00000473924 TMC3Q7Z5M5 1100 aa12.39□□□□□ -0.43
DDX56-209ENST00000473924 SPATS2Q86XZ4 545 aaKnown RBP12.39□□□□□ -0.43
DDX56-209ENST00000473924 KLHDC8BQ8IXV7 354 aa12.39□□□□□ -0.43
DDX56-209ENST00000473924 RAVER1Q8IY67 606 aaKnown RBP12.39□□□□□ -0.43
DDX56-209ENST00000473924 NRSN1Q8IZ57 195 aa12.39□□□□□ -0.43
DDX56-209ENST00000473924 SLC22A18ASQ8N1D0 253 aa12.39□□□□□ -0.43
DDX56-209ENST00000473924 DNAAF3Q8N9W5 541 aa12.39□□□□□ -0.43
DDX56-209ENST00000473924 ELF4Q99607 663 aaPredicted RBP12.39□□□□□ -0.43
DDX56-209ENST00000473924 APOOQ9BUR5 198 aa12.39□□□□□ -0.43
DDX56-209ENST00000473924 ABCG8Q9H221 673 aa12.39□□□□□ -0.43
DDX56-209ENST00000473924 WDR26Q9H7D7 661 aa12.39□□□□□ -0.43
DDX56-209ENST00000473924 ERVMER34-1Q9H9K5 563 aa12.39□□□□□ -0.43
DDX56-209ENST00000473924 IL21RQ9HBE5 538 aa12.39□□□□□ -0.43
DDX56-209ENST00000473924 RAD18Q9NS91 495 aa12.39□□□□□ -0.43
DDX56-209ENST00000473924 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.39□□□□□ -0.43
DDX56-209ENST00000473924 CDV3Q9UKY7 258 aaKnown RBP12.39□□□□□ -0.43
DDX56-209ENST00000473924 PTPRZ1P23471 2315 aaPredicted RBP12.38□□□□□ -0.43
DDX56-209ENST00000473924 SPTY2D1-AS1A0A0U1RR47 76 aa12.38□□□□□ -0.43
DDX56-209ENST00000473924 C2orf81A6NN90 581 aa12.38□□□□□ -0.43
DDX56-209ENST00000473924 K7ESM1 405 aa12.38□□□□□ -0.43
DDX56-209ENST00000473924 AURKAO14965 403 aa12.38□□□□□ -0.43
DDX56-209ENST00000473924 ECEL1O95672 775 aa12.38□□□□□ -0.43
DDX56-209ENST00000473924 PYGLP06737 847 aa12.38□□□□□ -0.43
DDX56-209ENST00000473924 SDHBP21912 280 aa12.38□□□□□ -0.43
DDX56-209ENST00000473924 VPS41P49754 854 aa12.38□□□□□ -0.43
DDX56-209ENST00000473924 CCT8P50990 548 aa12.38□□□□□ -0.43
DDX56-209ENST00000473924 LIMK1P53667 647 aa12.38□□□□□ -0.43
DDX56-209ENST00000473924 TERF1P54274 439 aa12.38□□□□□ -0.43
DDX56-209ENST00000473924 DPTQ07507 201 aa12.38□□□□□ -0.43
DDX56-209ENST00000473924 GPS1Q13098 491 aa12.38□□□□□ -0.43
DDX56-209ENST00000473924 SEMA5AQ13591 1074 aa12.38□□□□□ -0.43
DDX56-209ENST00000473924 ZNF423Q2M1K9 1284 aa12.38□□□□□ -0.43
DDX56-209ENST00000473924 RFLNAQ6ZTI6 216 aa12.38□□□□□ -0.43
DDX56-209ENST00000473924 ZNF765Q7L2R6 523 aa12.38□□□□□ -0.43
DDX56-209ENST00000473924 PARGQ86W56 976 aa12.38□□□□□ -0.43
DDX56-209ENST00000473924 KLHL7Q8IXQ5 586 aa12.38□□□□□ -0.43
DDX56-209ENST00000473924 ZNF592Q92610 1267 aa12.38□□□□□ -0.43
DDX56-209ENST00000473924 SCAMP4Q969E2 229 aa12.38□□□□□ -0.43
DDX56-209ENST00000473924 RIOK2Q9BVS4 552 aaKnown RBP12.38□□□□□ -0.43
DDX56-209ENST00000473924 DDX47Q9H0S4 455 aaKnown RBP12.38□□□□□ -0.43
DDX56-209ENST00000473924 FAM83DQ9H4H8 585 aa12.38□□□□□ -0.43
DDX56-209ENST00000473924 ARNT2Q9HBZ2 717 aa12.38□□□□□ -0.43
DDX56-209ENST00000473924 BPIFA1Q9NP55 256 aa12.38□□□□□ -0.43
DDX56-209ENST00000473924 PHPT1Q9NRX4 125 aaPredicted RBP12.38□□□□□ -0.43
DDX56-209ENST00000473924 TM7SF3Q9NS93 570 aa12.38□□□□□ -0.43
DDX56-209ENST00000473924 DNAAF2Q9NVR5 837 aaKnown RBP12.38□□□□□ -0.43
DDX56-209ENST00000473924 DNAJC28Q9NX36 388 aa12.38□□□□□ -0.43
DDX56-209ENST00000473924 FNDC3AQ9Y2H6 1198 aaKnown RBP12.38□□□□□ -0.43
DDX56-209ENST00000473924 PKP3Q9Y446 797 aa12.38□□□□□ -0.43
DDX56-209ENST00000473924 CACNA1EQ15878 2313 aa12.38□□□□□ -0.43
DDX56-209ENST00000473924 ZNF292O60281 2723 aa12.38□□□□□ -0.43
DDX56-209ENST00000473924 TP53BP1Q12888 1972 aaPredicted RBP12.38□□□□□ -0.43
DDX56-209ENST00000473924 GVINP1Q7Z2Y8 2422 aa12.37□□□□□ -0.43
DDX56-209ENST00000473924 PIEZO1Q92508 2521 aa12.37□□□□□ -0.43
DDX56-209ENST00000473924 A0A1B0GTQ1 180 aa12.37□□□□□ -0.43
DDX56-209ENST00000473924 H3BM21 787 aa12.37□□□□□ -0.43
DDX56-209ENST00000473924 CCDC188H7C350 402 aa12.37□□□□□ -0.43
DDX56-209ENST00000473924 PDE2AO00408 941 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms