RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 BCAP29Q9UHQ4 241 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 IKZF3Q9UKT9 509 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 HEMK1Q9Y5R4 338 aaPredicted RBP10.95□□□□□ -0.66
C9orf3-214ENST00000473778 ACTL7AQ9Y615 435 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 CEPT1Q9Y6K0 416 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 GREB1Q4ZG55 1949 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 CCDC160A6NGH7 325 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 UBXN8O00124 270 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 FXYD1O00168 92 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 GPC4O75487 556 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 IGHA2P01877 340 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 RBP1P09455 135 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 GNAO1P09471 354 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 CD1DP15813 335 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 CDH2P19022 906 aaPredicted RBP10.95□□□□□ -0.66
C9orf3-214ENST00000473778 SLC7A1P30825 629 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 ETFBP38117 255 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 GRIA3P42263 894 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 HERVK_113P63132 956 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 DDR2Q16832 855 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 VPS26BQ4G0F5 336 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 FAM45BPQ6NSW5 357 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 DNAJC14Q6Y2X3 702 aaPredicted RBP10.95□□□□□ -0.66
C9orf3-214ENST00000473778 EPHX4Q8IUS5 362 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 SCN4BQ8IWT1 228 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 UMODL1-AS1Q8N2C9 162 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 KLHDC9Q8NEP7 349 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 FAM45AQ8TCE6 357 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 ERVK-6Q9BXR3 956 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 PLK2Q9NYY3 685 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 CIDEBQ9UHD4 219 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 GBF1Q92538 1859 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 FAM149AA5PLN7 773 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 WASH4PA8MWX3 477 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 M0QZ92 97 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 HNRNPRO43390 633 aaKnown RBP10.94□□□□□ -0.66
C9orf3-214ENST00000473778 GRK4P32298 578 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 KPNA2P52292 529 aaKnown RBP10.94□□□□□ -0.66
C9orf3-214ENST00000473778 NUBP1P53384 320 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 ECT2LQ008S8 904 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 CAPRIN1Q14444 709 aaKnown RBP10.94□□□□□ -0.66
C9orf3-214ENST00000473778 NHSL2Q5HYW2 709 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 MARC1Q5VT66 337 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 KLC3Q6P597 504 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 METTL23Q86XA0 190 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 RYBPQ8N488 228 aaPredicted RBP10.94□□□□□ -0.66
C9orf3-214ENST00000473778 OR13C4Q8NGS5 318 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 TADA1Q96BN2 335 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 CCDC126Q96EE4 140 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 FAR2Q96K12 515 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 ZFRQ96KR1 1074 aaKnown RBP10.94□□□□□ -0.66
C9orf3-214ENST00000473778 NSMCE3Q96MG7 304 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 PHF12Q96QT6 1004 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 GPATCH1Q9BRR8 931 aaKnown RBP10.94□□□□□ -0.66
C9orf3-214ENST00000473778 SLC25A23Q9BV35 468 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 MFSD1Q9H3U5 465 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 LIN28AQ9H9Z2 209 aaKnown RBP10.94□□□□□ -0.66
C9orf3-214ENST00000473778 RGS18Q9NS28 235 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 ABI2Q9NYB9 513 aaPredicted RBP10.94□□□□□ -0.66
C9orf3-214ENST00000473778 NDUFA13Q9P0J0 144 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 CROTQ9UKG9 612 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 PLXNA3P51805 1871 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 A0A0J9YYE9 177 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 ARHGAP10A1A4S6 786 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 ARHGEF37A1IGU5 675 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 PIP5K1BO14986 540 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 SLC7A4O43246 635 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 HTRA2O43464 458 aaPredicted RBP10.94□□□□□ -0.66
C9orf3-214ENST00000473778 PAPSS2O95340 614 aaPredicted RBP10.94□□□□□ -0.66
C9orf3-214ENST00000473778 FDXRP22570 491 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 OXTRP30559 389 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 RENBPP51606 427 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 NDST2P52849 883 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 CDH15P55291 814 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 TRAP1Q12931 704 aaKnown RBP10.94□□□□□ -0.66
C9orf3-214ENST00000473778 SLC39A12Q504Y0 691 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 SETMARQ53H47 684 aaPredicted RBP10.94□□□□□ -0.66
C9orf3-214ENST00000473778 GNASQ5JWF2 1037 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 B3GNT6Q6ZMB0 384 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 SPATA2LQ8IUW3 424 aaPredicted RBP10.94□□□□□ -0.66
C9orf3-214ENST00000473778 PTGR2Q8N8N7 351 aaPredicted RBP10.94□□□□□ -0.66
C9orf3-214ENST00000473778 CALML6Q8TD86 181 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 TOP1MTQ969P6 601 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 DUS3LQ96G46 650 aaKnown RBP10.94□□□□□ -0.66
C9orf3-214ENST00000473778 HIC2Q96JB3 615 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 TEX37Q96LM6 180 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 SMIM14Q96QK8 99 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 TMEM79Q9BSE2 394 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 SLC52A3Q9NQ40 469 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 EGFL7Q9UHF1 273 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 DMTF1Q9Y222 760 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 MED16Q9Y2X0 877 aa10.94□□□□□ -0.66
C9orf3-214ENST00000473778 VWA8A3KMH1 1905 aa10.93□□□□□ -0.66
C9orf3-214ENST00000473778 LOC285095A0A1B0GVY8 99 aa10.93□□□□□ -0.66
C9orf3-214ENST00000473778 NR5A2O00482 541 aa10.93□□□□□ -0.66
C9orf3-214ENST00000473778 SOAT2O75908 522 aa10.93□□□□□ -0.66
C9orf3-214ENST00000473778 SRP72O76094 671 aaKnown RBP10.93□□□□□ -0.66
C9orf3-214ENST00000473778 GOT2P00505 430 aaKnown RBP10.93□□□□□ -0.66
C9orf3-214ENST00000473778 ZNF37AP17032 561 aaPredicted RBP10.93□□□□□ -0.66
C9orf3-214ENST00000473778 CTGFP29279 349 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms