RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 ADAM20O43506 726 aa6.32□□□□□ -1.4
SEC22A-204ENST00000473494 TPPPO94811 219 aa6.32□□□□□ -1.4
SEC22A-204ENST00000473494 DNTTP04053 509 aa6.32□□□□□ -1.4
SEC22A-204ENST00000473494 CYC1P08574 325 aa6.32□□□□□ -1.4
SEC22A-204ENST00000473494 NRIP1P48552 1158 aa6.32□□□□□ -1.4
SEC22A-204ENST00000473494 MFAP4P55083 255 aa6.32□□□□□ -1.4
SEC22A-204ENST00000473494 LRMPQ12912 555 aa6.32□□□□□ -1.4
SEC22A-204ENST00000473494 IKQ13123 557 aaPredicted RBP6.32□□□□□ -1.4
SEC22A-204ENST00000473494 MYBPC2Q14324 1141 aa6.32□□□□□ -1.4
SEC22A-204ENST00000473494 NAB2Q15742 525 aa6.32□□□□□ -1.4
SEC22A-204ENST00000473494 NTRK2Q16620 822 aa6.32□□□□□ -1.4
SEC22A-204ENST00000473494 ZSCAN23Q3MJ62 389 aa6.32□□□□□ -1.4
SEC22A-204ENST00000473494 COLEC12Q5KU26 742 aa6.32□□□□□ -1.4
SEC22A-204ENST00000473494 WASHC2DQ5SRD0 308 aa6.32□□□□□ -1.4
SEC22A-204ENST00000473494 PXDC1Q5TGL8 231 aa6.32□□□□□ -1.4
SEC22A-204ENST00000473494 CLEC17AQ6ZS10 378 aa6.32□□□□□ -1.4
SEC22A-204ENST00000473494 MON1BQ7L1V2 547 aa6.32□□□□□ -1.4
SEC22A-204ENST00000473494 SCML4Q8N228 414 aa6.32□□□□□ -1.4
SEC22A-204ENST00000473494 HJURPQ8NCD3 748 aaPredicted RBP6.32□□□□□ -1.4
SEC22A-204ENST00000473494 DENND1AQ8TEH3 1009 aa6.32□□□□□ -1.4
SEC22A-204ENST00000473494 URB1-AS1Q96HZ7 61 aa6.32□□□□□ -1.4
SEC22A-204ENST00000473494 PLAC1Q9HBJ0 212 aa6.32□□□□□ -1.4
SEC22A-204ENST00000473494 GIMAP4Q9NUV9 329 aa6.32□□□□□ -1.4
SEC22A-204ENST00000473494 OR6C3Q9NZP0 311 aa6.32□□□□□ -1.4
SEC22A-204ENST00000473494 MARCH4Q9P2E8 410 aaPredicted RBP6.32□□□□□ -1.4
SEC22A-204ENST00000473494 FBXW11Q9UKB1 542 aa6.32□□□□□ -1.4
SEC22A-204ENST00000473494 NENFQ9UMX5 172 aa6.32□□□□□ -1.4
SEC22A-204ENST00000473494 ZNF644Q9H582 1327 aaPredicted RBP6.31□□□□□ -1.4
SEC22A-204ENST00000473494 OR2A25A4D2G3 310 aa6.31□□□□□ -1.4
SEC22A-204ENST00000473494 SYNDIG1LA6NDD5 238 aa6.31□□□□□ -1.4
SEC22A-204ENST00000473494 H0YGN5 161 aa6.31□□□□□ -1.4
SEC22A-204ENST00000473494 CTDSP2O14595 271 aa6.31□□□□□ -1.4
SEC22A-204ENST00000473494 JRKO75564 520 aa6.31□□□□□ -1.4
SEC22A-204ENST00000473494 LCATP04180 440 aa6.31□□□□□ -1.4
SEC22A-204ENST00000473494 METAP2P50579 478 aaKnown RBP eCLIP6.31□□□□□ -1.4
SEC22A-204ENST00000473494 CALD1Q05682 793 aaKnown RBP6.31□□□□□ -1.4
SEC22A-204ENST00000473494 TRAF1Q13077 416 aa6.31□□□□□ -1.4
SEC22A-204ENST00000473494 CTTNQ14247 550 aaKnown RBP6.31□□□□□ -1.4
SEC22A-204ENST00000473494 METTL2BQ6P1Q9 378 aaKnown RBP6.31□□□□□ -1.4
SEC22A-204ENST00000473494 CRELD2Q6UXH1 353 aaPredicted RBP6.31□□□□□ -1.4
SEC22A-204ENST00000473494 CTU1Q7Z7A3 348 aaKnown RBP6.31□□□□□ -1.4
SEC22A-204ENST00000473494 LINC00346Q8IVM7 164 aa6.31□□□□□ -1.4
SEC22A-204ENST00000473494 TMEM199Q8N511 208 aa6.31□□□□□ -1.4
SEC22A-204ENST00000473494 AADATQ8N5Z0 425 aa6.31□□□□□ -1.4
SEC22A-204ENST00000473494 PRPF31Q8WWY3 499 aaKnown RBP6.31□□□□□ -1.4
SEC22A-204ENST00000473494 TRIB2Q92519 343 aa6.31□□□□□ -1.4
SEC22A-204ENST00000473494 SLC25A28Q96A46 364 aa6.31□□□□□ -1.4
SEC22A-204ENST00000473494 SLC22A18Q96BI1 424 aa6.31□□□□□ -1.4
SEC22A-204ENST00000473494 METTL2AQ96IZ6 378 aaKnown RBP6.31□□□□□ -1.4
SEC22A-204ENST00000473494 HAUS8Q9BT25 410 aa6.31□□□□□ -1.4
SEC22A-204ENST00000473494 SPRTNQ9H040 489 aaPredicted RBP6.31□□□□□ -1.4
SEC22A-204ENST00000473494 PPP1R3EQ9H7J1 279 aa6.31□□□□□ -1.4
SEC22A-204ENST00000473494 PADI1Q9ULC6 663 aa6.31□□□□□ -1.4
SEC22A-204ENST00000473494 CMAHPQ9Y471 501 aa6.31□□□□□ -1.4
SEC22A-204ENST00000473494 CLIC4Q9Y696 253 aa6.31□□□□□ -1.4
SEC22A-204ENST00000473494 EVPLQ92817 2033 aa6.31□□□□□ -1.4
SEC22A-204ENST00000473494 AKR1B15C9JRZ8 316 aaPredicted RBP6.3□□□□□ -1.4
SEC22A-204ENST00000473494 TIMM23O14925 209 aa6.3□□□□□ -1.4
SEC22A-204ENST00000473494 OGG1O15527 345 aa6.3□□□□□ -1.4
SEC22A-204ENST00000473494 MITFO75030 526 aaPredicted RBP6.3□□□□□ -1.4
SEC22A-204ENST00000473494 PPFIA2O75334 1257 aa6.3□□□□□ -1.4
SEC22A-204ENST00000473494 SYF2O95926 243 aaKnown RBP6.3□□□□□ -1.4
SEC22A-204ENST00000473494 TMEM191BP0C7N4 346 aa6.3□□□□□ -1.4
SEC22A-204ENST00000473494 SELLP14151 372 aa6.3□□□□□ -1.4
SEC22A-204ENST00000473494 HOXB2P14652 356 aa6.3□□□□□ -1.4
SEC22A-204ENST00000473494 PIGAP37287 484 aa6.3□□□□□ -1.4
SEC22A-204ENST00000473494 ENTPD1P49961 510 aa6.3□□□□□ -1.4
SEC22A-204ENST00000473494 HSD17B4P51659 736 aa6.3□□□□□ -1.4
SEC22A-204ENST00000473494 PNLIPRP2P54317 469 aa6.3□□□□□ -1.4
SEC22A-204ENST00000473494 NEDD9Q14511 834 aa6.3□□□□□ -1.4
SEC22A-204ENST00000473494 HNF4GQ14541 408 aa6.3□□□□□ -1.4
SEC22A-204ENST00000473494 PRTGQ2VWP7 1150 aa6.3□□□□□ -1.4
SEC22A-204ENST00000473494 RARS2Q5T160 578 aaKnown RBP6.3□□□□□ -1.4
SEC22A-204ENST00000473494 LRIF1Q5T3J3 769 aa6.3□□□□□ -1.4
SEC22A-204ENST00000473494 PDXDC1Q6P996 788 aa6.3□□□□□ -1.4
SEC22A-204ENST00000473494 SHFQ7M4L6 423 aa6.3□□□□□ -1.4
SEC22A-204ENST00000473494 ZNF367Q7RTV3 350 aa6.3□□□□□ -1.4
SEC22A-204ENST00000473494 CACNA2D4Q7Z3S7 1137 aa6.3□□□□□ -1.4
SEC22A-204ENST00000473494 SAT2Q96F10 170 aaPredicted RBP6.3□□□□□ -1.4
SEC22A-204ENST00000473494 PCGF1Q9BSM1 259 aa6.3□□□□□ -1.4
SEC22A-204ENST00000473494 MRPL1Q9BYD6 325 aaKnown RBP6.3□□□□□ -1.4
SEC22A-204ENST00000473494 GPR108Q9NPR9 543 aa6.3□□□□□ -1.4
SEC22A-204ENST00000473494 IL36RNQ9UBH0 155 aa6.3□□□□□ -1.4
SEC22A-204ENST00000473494 EXO1Q9UQ84 846 aaKnown RBP6.3□□□□□ -1.4
SEC22A-204ENST00000473494 J3KR12 359 aa6.29□□□□□ -1.4
SEC22A-204ENST00000473494 VWA5AO00534 786 aa6.29□□□□□ -1.4
SEC22A-204ENST00000473494 SOCS2O14508 198 aa6.29□□□□□ -1.4
SEC22A-204ENST00000473494 ATP2A1O14983 1001 aa6.29□□□□□ -1.4
SEC22A-204ENST00000473494 SAT1P21673 171 aa6.29□□□□□ -1.4
SEC22A-204ENST00000473494 UBA1P22314 1058 aaKnown RBP6.29□□□□□ -1.4
SEC22A-204ENST00000473494 HNRNPH1P31943 449 aaKnown RBP6.29□□□□□ -1.4
SEC22A-204ENST00000473494 RFX2P48378 723 aa6.29□□□□□ -1.4
SEC22A-204ENST00000473494 RFX5P48382 616 aaPredicted RBP6.29□□□□□ -1.4
SEC22A-204ENST00000473494 ETFDHQ16134 617 aa6.29□□□□□ -1.4
SEC22A-204ENST00000473494 OTUD1Q5VV17 481 aaPredicted RBP6.29□□□□□ -1.4
SEC22A-204ENST00000473494 GARNL3Q5VVW2 1013 aa6.29□□□□□ -1.4
SEC22A-204ENST00000473494 GGNBP1Q5YKI7 109 aa6.29□□□□□ -1.4
SEC22A-204ENST00000473494 GPR139Q6DWJ6 353 aa6.29□□□□□ -1.4
SEC22A-204ENST00000473494 KBTBD6Q86V97 674 aa6.29□□□□□ -1.4
SEC22A-204ENST00000473494 SPATA6LQ8N4H0 392 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms