RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 CTTNBP2NLQ9P2B4 639 aa15.28■□□□□ 0.04
VTI1A-203ENST00000472892 MOSPD1Q9UJG1 213 aa15.28■□□□□ 0.04
VTI1A-203ENST00000472892 EIF4E1BA6NMX2 242 aaKnown RBP15.27■□□□□ 0.04
VTI1A-203ENST00000472892 D6RAR5 112 aa15.27■□□□□ 0.04
VTI1A-203ENST00000472892 KLK10O43240 276 aa15.27■□□□□ 0.04
VTI1A-203ENST00000472892 NUDT21O43809 227 aaKnown RBP15.27■□□□□ 0.04
VTI1A-203ENST00000472892 TNFSF15O95150 251 aa15.27■□□□□ 0.04
VTI1A-203ENST00000472892 H2AFZP0C0S5 128 aa15.27■□□□□ 0.04
VTI1A-203ENST00000472892 KRT10P13645 584 aa15.27■□□□□ 0.04
VTI1A-203ENST00000472892 CTPS1P17812 591 aa15.27■□□□□ 0.04
VTI1A-203ENST00000472892 CCKBRP32239 447 aa15.27■□□□□ 0.04
VTI1A-203ENST00000472892 TAS2R40P59535 323 aa15.27■□□□□ 0.04
VTI1A-203ENST00000472892 CDK3Q00526 305 aa15.27■□□□□ 0.04
VTI1A-203ENST00000472892 PTSQ03393 145 aa15.27■□□□□ 0.04
VTI1A-203ENST00000472892 ITKQ08881 620 aa15.27■□□□□ 0.04
VTI1A-203ENST00000472892 ARHGEF7Q14155 803 aa15.27■□□□□ 0.04
VTI1A-203ENST00000472892 SLC18A3Q16572 532 aa15.27■□□□□ 0.04
VTI1A-203ENST00000472892 IFI16Q16666 785 aaKnown RBP15.27■□□□□ 0.04
VTI1A-203ENST00000472892 ASTE1Q2TB18 679 aaPredicted RBP15.27■□□□□ 0.04
VTI1A-203ENST00000472892 ZSCAN23Q3MJ62 389 aa15.27■□□□□ 0.04
VTI1A-203ENST00000472892 SPECC1LQ69YQ0 1117 aa15.27■□□□□ 0.04
VTI1A-203ENST00000472892 TIGD7Q6NT04 549 aaPredicted RBP15.27■□□□□ 0.04
VTI1A-203ENST00000472892 FOXR1Q6PIV2 292 aa15.27■□□□□ 0.04
VTI1A-203ENST00000472892 USP45Q70EL2 814 aa15.27■□□□□ 0.04
VTI1A-203ENST00000472892 H2AFVQ71UI9 128 aa15.27■□□□□ 0.04
VTI1A-203ENST00000472892 B3GNT8Q7Z7M8 397 aa15.27■□□□□ 0.04
VTI1A-203ENST00000472892 NLRP8Q86W28 1048 aa15.27■□□□□ 0.04
VTI1A-203ENST00000472892 C17orf82Q86X59 251 aaPredicted RBP15.27■□□□□ 0.04
VTI1A-203ENST00000472892 NRROSQ86YC3 692 aa15.27■□□□□ 0.04
VTI1A-203ENST00000472892 MAP7D3Q8IWC1 876 aa15.27■□□□□ 0.04
VTI1A-203ENST00000472892 NDUFAF2Q8N183 169 aa15.27■□□□□ 0.04
VTI1A-203ENST00000472892 FAF2Q96CS3 445 aa15.27■□□□□ 0.04
VTI1A-203ENST00000472892 CCDC97Q96F63 343 aaPredicted RBP15.27■□□□□ 0.04
VTI1A-203ENST00000472892 DPEP2Q9H4A9 486 aa15.27■□□□□ 0.04
VTI1A-203ENST00000472892 SYNDIG1Q9H7V2 258 aa15.27■□□□□ 0.04
VTI1A-203ENST00000472892 CARS2Q9HA77 564 aaKnown RBP15.27■□□□□ 0.04
VTI1A-203ENST00000472892 SPATS2LQ9NUQ6 558 aaKnown RBP15.27■□□□□ 0.04
VTI1A-203ENST00000472892 RBM22Q9NW64 420 aaKnown RBP eCLIP15.27■□□□□ 0.04
VTI1A-203ENST00000472892 TRNAU1APQ9NX07 287 aaKnown RBP15.27■□□□□ 0.04
VTI1A-203ENST00000472892 LRIT1Q9P2V4 623 aa15.27■□□□□ 0.04
VTI1A-203ENST00000472892 AMACRQ9UHK6 382 aa15.27■□□□□ 0.04
VTI1A-203ENST00000472892 LCMT1Q9UIC8 334 aa15.27■□□□□ 0.04
VTI1A-203ENST00000472892 METRNQ9UJH8 293 aa15.27■□□□□ 0.04
VTI1A-203ENST00000472892 SLC17A4Q9Y2C5 497 aa15.27■□□□□ 0.04
VTI1A-203ENST00000472892 RNF215Q9Y6U7 377 aa15.27■□□□□ 0.04
VTI1A-203ENST00000472892 BAHCC1Q9P281 2608 aa15.26■□□□□ 0.03
VTI1A-203ENST00000472892 A0A0J9YYE9 177 aa15.26■□□□□ 0.03
VTI1A-203ENST00000472892 PLD2O14939 933 aa15.26■□□□□ 0.03
VTI1A-203ENST00000472892 TRBC1P01850 177 aa15.26■□□□□ 0.03
VTI1A-203ENST00000472892 FGF1P05230 155 aa15.26■□□□□ 0.03
VTI1A-203ENST00000472892 TPM3P06753 285 aa15.26■□□□□ 0.03
VTI1A-203ENST00000472892 ITGA2BP08514 1039 aa15.26■□□□□ 0.03
VTI1A-203ENST00000472892 KRT7P08729 469 aa15.26■□□□□ 0.03
VTI1A-203ENST00000472892 CCNB1P14635 433 aa15.26■□□□□ 0.03
VTI1A-203ENST00000472892 INHBCP55103 352 aa15.26■□□□□ 0.03
VTI1A-203ENST00000472892 TMPRSS3P57727 454 aa15.26■□□□□ 0.03
VTI1A-203ENST00000472892 ZFP36L1Q07352 338 aaKnown RBP15.26■□□□□ 0.03
VTI1A-203ENST00000472892 RFLNAQ6ZTI6 216 aa15.26■□□□□ 0.03
VTI1A-203ENST00000472892 CCNJLQ8IV13 435 aa15.26■□□□□ 0.03
VTI1A-203ENST00000472892 PQLC3Q8N755 202 aa15.26■□□□□ 0.03
VTI1A-203ENST00000472892 Q8N9G6 341 aaPredicted RBP15.26■□□□□ 0.03
VTI1A-203ENST00000472892 OR8K1Q8NGG5 319 aa15.26■□□□□ 0.03
VTI1A-203ENST00000472892 ARRDC2Q8TBH0 407 aa15.26■□□□□ 0.03
VTI1A-203ENST00000472892 SNRNP27Q8WVK2 155 aaKnown RBP15.26■□□□□ 0.03
VTI1A-203ENST00000472892 SCARF2Q96GP6 870 aaPredicted RBP15.26■□□□□ 0.03
VTI1A-203ENST00000472892 TMEM74Q96NL1 305 aa15.26■□□□□ 0.03
VTI1A-203ENST00000472892 DNAJC7Q99615 494 aa15.26■□□□□ 0.03
VTI1A-203ENST00000472892 PACSIN1Q9BY11 444 aa15.26■□□□□ 0.03
VTI1A-203ENST00000472892 GSDMCQ9BYG8 508 aa15.26■□□□□ 0.03
VTI1A-203ENST00000472892 FOXP3Q9BZS1 431 aa15.26■□□□□ 0.03
VTI1A-203ENST00000472892 STRADBQ9C0K7 418 aa15.26■□□□□ 0.03
VTI1A-203ENST00000472892 ABCG8Q9H221 673 aa15.26■□□□□ 0.03
VTI1A-203ENST00000472892 SUFUQ9UMX1 484 aa15.26■□□□□ 0.03
VTI1A-203ENST00000472892 FASNP49327 2511 aaKnown RBP15.26■□□□□ 0.03
VTI1A-203ENST00000472892 A0A0U1RQS6 177 aa15.25■□□□□ 0.03
VTI1A-203ENST00000472892 B4DGG1 531 aa15.25■□□□□ 0.03
VTI1A-203ENST00000472892 SOD1P00441 154 aa15.25■□□□□ 0.03
VTI1A-203ENST00000472892 PRLP01236 227 aa15.25■□□□□ 0.03
VTI1A-203ENST00000472892 IVLP07476 585 aa15.25■□□□□ 0.03
VTI1A-203ENST00000472892 ZNF30P17039 623 aa15.25■□□□□ 0.03
VTI1A-203ENST00000472892 MX2P20592 715 aa15.25■□□□□ 0.03
VTI1A-203ENST00000472892 PTMSP20962 102 aa15.25■□□□□ 0.03
VTI1A-203ENST00000472892 MAN1A1P33908 653 aa15.25■□□□□ 0.03
VTI1A-203ENST00000472892 GJC1P36383 396 aa15.25■□□□□ 0.03
VTI1A-203ENST00000472892 POLD2P49005 469 aa15.25■□□□□ 0.03
VTI1A-203ENST00000472892 B4GALNT1Q00973 533 aa15.25■□□□□ 0.03
VTI1A-203ENST00000472892 DSC2Q02487 901 aa15.25■□□□□ 0.03
VTI1A-203ENST00000472892 GBE1Q04446 702 aa15.25■□□□□ 0.03
VTI1A-203ENST00000472892 SLC10A2Q12908 348 aaPredicted RBP15.25■□□□□ 0.03
VTI1A-203ENST00000472892 LRRC66Q68CR7 880 aa15.25■□□□□ 0.03
VTI1A-203ENST00000472892 RAET1GQ6H3X3 334 aa15.25■□□□□ 0.03
VTI1A-203ENST00000472892 ADAMTSL4Q6UY14 1074 aa15.25■□□□□ 0.03
VTI1A-203ENST00000472892 RAB11FIP2Q7L804 512 aa15.25■□□□□ 0.03
VTI1A-203ENST00000472892 SPRED1Q7Z699 444 aa15.25■□□□□ 0.03
VTI1A-203ENST00000472892 RAVER1Q8IY67 606 aaKnown RBP15.25■□□□□ 0.03
VTI1A-203ENST00000472892 FBXO39Q8N4B4 442 aa15.25■□□□□ 0.03
VTI1A-203ENST00000472892 KIAA1524Q8TCG1 905 aa15.25■□□□□ 0.03
VTI1A-203ENST00000472892 PTCD2Q8WV60 388 aaKnown RBP15.25■□□□□ 0.03
VTI1A-203ENST00000472892 CTNNBL1Q8WYA6 563 aaPredicted RBP15.25■□□□□ 0.03
VTI1A-203ENST00000472892 SMIM14Q96QK8 99 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms