RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 CARD6Q9BX69 1037 aa13.51□□□□□ -0.25
HMGN1-211ENST00000471260 WDR26Q9H7D7 661 aa13.51□□□□□ -0.25
HMGN1-211ENST00000471260 POLR1BQ9H9Y6 1135 aa13.51□□□□□ -0.25
HMGN1-211ENST00000471260 CDC23Q9UJX2 597 aa13.51□□□□□ -0.25
HMGN1-211ENST00000471260 DNPEPQ9ULA0 475 aa13.51□□□□□ -0.25
HMGN1-211ENST00000471260 PCDHB1Q9Y5F3 818 aa13.51□□□□□ -0.25
HMGN1-211ENST00000471260 TTC24A2A3L6 582 aaPredicted RBP13.5□□□□□ -0.25
HMGN1-211ENST00000471260 CTAGE9A4FU28 777 aa13.5□□□□□ -0.25
HMGN1-211ENST00000471260 TMEM202A6NGA9 273 aa13.5□□□□□ -0.25
HMGN1-211ENST00000471260 SOWAHDA6NJG2 315 aa13.5□□□□□ -0.25
HMGN1-211ENST00000471260 FANCGO15287 622 aa13.5□□□□□ -0.25
HMGN1-211ENST00000471260 TLX3O43711 291 aaPredicted RBP13.5□□□□□ -0.25
HMGN1-211ENST00000471260 MFSD11O43934 449 aa13.5□□□□□ -0.25
HMGN1-211ENST00000471260 FZD6O60353 706 aa13.5□□□□□ -0.25
HMGN1-211ENST00000471260 USP12O75317 370 aa13.5□□□□□ -0.25
HMGN1-211ENST00000471260 MYCLP1P12525 358 aaPredicted RBP13.5□□□□□ -0.25
HMGN1-211ENST00000471260 ZNF30P17039 623 aa13.5□□□□□ -0.25
HMGN1-211ENST00000471260 CA4P22748 312 aa13.5□□□□□ -0.25
HMGN1-211ENST00000471260 ABCG1P45844 678 aa13.5□□□□□ -0.25
HMGN1-211ENST00000471260 ERVPABLB-1P60509 514 aa13.5□□□□□ -0.25
HMGN1-211ENST00000471260 OGFOD3Q6PK18 319 aa13.5□□□□□ -0.25
HMGN1-211ENST00000471260 NLRP8Q86W28 1048 aa13.5□□□□□ -0.25
HMGN1-211ENST00000471260 PIH1D2Q8WWB5 315 aa13.5□□□□□ -0.25
HMGN1-211ENST00000471260 HDAC11Q96DB2 347 aa13.5□□□□□ -0.25
HMGN1-211ENST00000471260 DTD2Q96FN9 168 aa13.5□□□□□ -0.25
HMGN1-211ENST00000471260 PDXPQ96GD0 296 aa13.5□□□□□ -0.25
HMGN1-211ENST00000471260 SEMA3CQ99985 751 aa13.5□□□□□ -0.25
HMGN1-211ENST00000471260 PACSIN1Q9BY11 444 aa13.5□□□□□ -0.25
HMGN1-211ENST00000471260 TEX101Q9BY14 249 aa13.5□□□□□ -0.25
HMGN1-211ENST00000471260 NT5MQ9NPB1 228 aa13.5□□□□□ -0.25
HMGN1-211ENST00000471260 PHPT1Q9NRX4 125 aaPredicted RBP13.5□□□□□ -0.25
HMGN1-211ENST00000471260 RALYQ9UKM9 306 aaKnown RBP13.5□□□□□ -0.25
HMGN1-211ENST00000471260 GPR34Q9UPC5 381 aa13.5□□□□□ -0.25
HMGN1-211ENST00000471260 RAI2Q9Y5P3 530 aa13.5□□□□□ -0.25
HMGN1-211ENST00000471260 RP1P56715 2156 aa13.49□□□□□ -0.25
HMGN1-211ENST00000471260 A8MX80 341 aa13.49□□□□□ -0.25
HMGN1-211ENST00000471260 TMX2-CTNND1H3BSU7 103 aa13.49□□□□□ -0.25
HMGN1-211ENST00000471260 NTN3O00634 580 aaPredicted RBP13.49□□□□□ -0.25
HMGN1-211ENST00000471260 MTA2O94776 668 aa13.49□□□□□ -0.25
HMGN1-211ENST00000471260 PYGLP06737 847 aa13.49□□□□□ -0.25
HMGN1-211ENST00000471260 CELA2BP08218 269 aaPredicted RBP13.49□□□□□ -0.25
HMGN1-211ENST00000471260 CCNB1P14635 433 aa13.49□□□□□ -0.25
HMGN1-211ENST00000471260 PNLIPP16233 465 aa13.49□□□□□ -0.25
HMGN1-211ENST00000471260 KDELR1P24390 212 aa13.49□□□□□ -0.25
HMGN1-211ENST00000471260 MLLT3P42568 568 aaPredicted RBP13.49□□□□□ -0.25
HMGN1-211ENST00000471260 TAS2R40P59535 323 aa13.49□□□□□ -0.25
HMGN1-211ENST00000471260 RPL26P61254 145 aaKnown RBP13.49□□□□□ -0.25
HMGN1-211ENST00000471260 DPTQ07507 201 aa13.49□□□□□ -0.25
HMGN1-211ENST00000471260 ITKQ08881 620 aa13.49□□□□□ -0.25
HMGN1-211ENST00000471260 SPIDRQ14159 915 aa13.49□□□□□ -0.25
HMGN1-211ENST00000471260 PERM1Q5SV97 790 aa13.49□□□□□ -0.25
HMGN1-211ENST00000471260 ZFYVE27Q5T4F4 411 aa13.49□□□□□ -0.25
HMGN1-211ENST00000471260 CCDC170Q8IYT3 715 aa13.49□□□□□ -0.25
HMGN1-211ENST00000471260 GPR156Q8NFN8 814 aa13.49□□□□□ -0.25
HMGN1-211ENST00000471260 SLC35G2Q8TBE7 412 aa13.49□□□□□ -0.25
HMGN1-211ENST00000471260 OR1E3Q8WZA6 343 aa13.49□□□□□ -0.25
HMGN1-211ENST00000471260 DCBLD2Q96PD2 775 aa13.49□□□□□ -0.25
HMGN1-211ENST00000471260 RNF157Q96PX1 679 aa13.49□□□□□ -0.25
HMGN1-211ENST00000471260 NAPGQ99747 312 aaPredicted RBP13.49□□□□□ -0.25
HMGN1-211ENST00000471260 CCDC3Q9BQI4 270 aa13.49□□□□□ -0.25
HMGN1-211ENST00000471260 NHEJ1Q9H9Q4 299 aaPredicted RBP13.49□□□□□ -0.25
HMGN1-211ENST00000471260 FGF22Q9HCT0 170 aa13.49□□□□□ -0.25
HMGN1-211ENST00000471260 RBM22Q9NW64 420 aaKnown RBP eCLIP13.49□□□□□ -0.253e-6■■□□□ 11.7
HMGN1-211ENST00000471260 GULP1Q9UBP9 304 aa13.49□□□□□ -0.25
HMGN1-211ENST00000471260 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.49□□□□□ -0.25
HMGN1-211ENST00000471260 INTUQ9ULD6 942 aa13.49□□□□□ -0.25
HMGN1-211ENST00000471260 RPL26L1Q9UNX3 145 aaKnown RBP13.49□□□□□ -0.25
HMGN1-211ENST00000471260 PCDHGA8Q9Y5G5 932 aa13.49□□□□□ -0.25
HMGN1-211ENST00000471260 V9GYY5 206 aaPredicted RBP13.49□□□□□ -0.25
HMGN1-211ENST00000471260 SHROOM3Q8TF72 1996 aa13.49□□□□□ -0.25
HMGN1-211ENST00000471260 CACNA1GO43497 2377 aa13.49□□□□□ -0.25
HMGN1-211ENST00000471260 LRP4O75096 1905 aa13.49□□□□□ -0.25
HMGN1-211ENST00000471260 A0A0J9YYE9 177 aa13.48□□□□□ -0.25
HMGN1-211ENST00000471260 PRSS38A1L453 326 aa13.48□□□□□ -0.25
HMGN1-211ENST00000471260 NPIPB15A6NHN6 443 aaPredicted RBP13.48□□□□□ -0.25
HMGN1-211ENST00000471260 TRBC1P01850 177 aa13.48□□□□□ -0.25
HMGN1-211ENST00000471260 MPOP05164 745 aa13.48□□□□□ -0.25
HMGN1-211ENST00000471260 GLB1P16278 677 aa13.48□□□□□ -0.25
HMGN1-211ENST00000471260 LHCGRP22888 699 aa13.48□□□□□ -0.25
HMGN1-211ENST00000471260 GJC1P36383 396 aa13.48□□□□□ -0.25
HMGN1-211ENST00000471260 SLC1A1P43005 524 aa13.48□□□□□ -0.25
HMGN1-211ENST00000471260 EPHB1P54762 984 aa13.48□□□□□ -0.25
HMGN1-211ENST00000471260 GABREP78334 506 aa13.48□□□□□ -0.25
HMGN1-211ENST00000471260 PEX6Q13608 980 aa13.48□□□□□ -0.25
HMGN1-211ENST00000471260 MESDQ14696 234 aa13.48□□□□□ -0.25
HMGN1-211ENST00000471260 TCEAL1Q15170 157 aa13.48□□□□□ -0.25
HMGN1-211ENST00000471260 LRRC38Q5VT99 294 aa13.48□□□□□ -0.25
HMGN1-211ENST00000471260 TECPR1Q7Z6L1 1165 aa13.48□□□□□ -0.25
HMGN1-211ENST00000471260 TAF8Q7Z7C8 310 aa13.48□□□□□ -0.25
HMGN1-211ENST00000471260 TXLNBQ8N3L3 684 aa13.48□□□□□ -0.25
HMGN1-211ENST00000471260 PQLC3Q8N755 202 aa13.48□□□□□ -0.25
HMGN1-211ENST00000471260 ZNF248Q8NDW4 579 aa13.48□□□□□ -0.25
HMGN1-211ENST00000471260 CHP1Q99653 195 aa13.48□□□□□ -0.25
HMGN1-211ENST00000471260 LGR4Q9BXB1 951 aa13.48□□□□□ -0.25
HMGN1-211ENST00000471260 CYP4F12Q9HCS2 524 aa13.48□□□□□ -0.25
HMGN1-211ENST00000471260 ARFGAP3Q9NP61 516 aa13.48□□□□□ -0.25
HMGN1-211ENST00000471260 THSD1Q9NS62 852 aa13.48□□□□□ -0.25
HMGN1-211ENST00000471260 ZNF446Q9NWS9 450 aa13.48□□□□□ -0.25
HMGN1-211ENST00000471260 TRNAU1APQ9NX07 287 aaKnown RBP13.48□□□□□ -0.25
HMGN1-211ENST00000471260 APPL1Q9UKG1 709 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms