RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 TCRBV21S2A2A0A5A6 115 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 CCDC162PA2VCL2 907 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 GOLGA8CPA6NN73 597 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 H0Y858 1186 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 GOLGA8TH3BQL2 631 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 PSMD11O00231 422 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 CD3EAPO15446 510 aaKnown RBP9.75□□□□□ -0.85
CCM2-204ENST00000470837 TSPAN6O43657 245 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 LZTS3O60299 673 aaPredicted RBP9.75□□□□□ -0.85
CCM2-204ENST00000470837 NDUFS3O75489 264 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 PCDH8O95206 1070 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 MT-ND3P03897 115 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 SNRPAP09012 282 aaKnown RBP9.75□□□□□ -0.85
CCM2-204ENST00000470837 MC4RP32245 332 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 P2RY2P41231 377 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 TTPAP49638 278 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 SLC12A2P55011 1212 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 CSE1LP55060 971 aaKnown RBP9.75□□□□□ -0.85
CCM2-204ENST00000470837 STARD6P59095 220 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 RPS14P62263 151 aaKnown RBP9.75□□□□□ -0.85
CCM2-204ENST00000470837 ACVR1Q04771 509 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 CACNG1Q06432 222 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 CNTN1Q12860 1018 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 ITGA9Q13797 1035 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 ACOX1Q15067 660 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 RASA2Q15283 850 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 ZNF284Q2VY69 593 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 UBAP2Q5T6F2 1119 aaKnown RBP9.75□□□□□ -0.85
CCM2-204ENST00000470837 IER5LQ5T953 404 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 TEDDM1Q5T9Z0 273 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 RNF187Q5TA31 235 aaPredicted RBP9.75□□□□□ -0.85
CCM2-204ENST00000470837 AGBL2Q5U5Z8 902 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 LYPLAL1Q5VWZ2 237 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 KIAA1211LQ6NV74 962 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 ADGRD1Q6QNK2 874 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 PACS1Q6VY07 963 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.75□□□□□ -0.85
CCM2-204ENST00000470837 CERS6Q6ZMG9 384 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 KBTBD6Q86V97 674 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 UNC5BQ8IZJ1 945 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 CBARPQ8N350 705 aaPredicted RBP9.75□□□□□ -0.85
CCM2-204ENST00000470837 SCG3Q8WXD2 468 aaKnown RBP9.75□□□□□ -0.85
CCM2-204ENST00000470837 ARRDC3Q96B67 414 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 TMBIM4Q9HC24 238 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 FBXL12Q9NXK8 326 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 KCTD5Q9NXV2 234 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 IL1RAPL1Q9NZN1 696 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 IL17CQ9P0M4 197 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 SENP1Q9P0U3 644 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 FKBPLQ9UIM3 349 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 CRLS1Q9UJA2 301 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 FBXO5Q9UKT4 447 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 MYO18AQ92614 2054 aaKnown RBP9.75□□□□□ -0.85
CCM2-204ENST00000470837 CXorf49A8MYA2 514 aaPredicted RBP9.74□□□□□ -0.85
CCM2-204ENST00000470837 F8W8V4 182 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 H7C0S8 307 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 AGPSO00116 658 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 CCL22O00626 93 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 WNT9AO14904 365 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 ADAM23O75077 832 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 PIAS1O75925 651 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 PRAMEF1O95521 474 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 CHRM1P11229 460 aaPredicted RBP9.74□□□□□ -0.85
CCM2-204ENST00000470837 CHRNB1P11230 501 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 BMP1P13497 986 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 OGNP20774 298 aaKnown RBP9.74□□□□□ -0.85
CCM2-204ENST00000470837 TARSP26639 723 aaKnown RBP9.74□□□□□ -0.85
CCM2-204ENST00000470837 MMP12P39900 470 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 ARCN1P48444 511 aaKnown RBP9.74□□□□□ -0.85
CCM2-204ENST00000470837 CD151P48509 253 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 SPINT3P49223 89 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 LIG3P49916 1009 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 ARSDP51689 593 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 STC1P52823 247 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 SEMG2Q02383 582 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 PTPRRQ15256 657 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 CRY1Q16526 586 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 GPR33Q49SQ1 333 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 FAM151BQ6UXP7 276 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 SNX20Q7Z614 316 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 TSPAN33Q86UF1 283 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 CNTN4Q8IWV2 1026 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 RAVER1Q8IY67 606 aaKnown RBP9.74□□□□□ -0.85
CCM2-204ENST00000470837 NRSN1Q8IZ57 195 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 C2CD4AQ8NCU7 369 aaPredicted RBP9.74□□□□□ -0.85
CCM2-204ENST00000470837 FLCNQ8NFG4 579 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 TSTD1Q8NFU3 115 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 OR14C36Q8NHC7 312 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 DCAKDQ8WVC6 231 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 ULK4Q96C45 1275 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 SGSM3Q96HU1 749 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 ATP6V1G3Q96LB4 118 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 PLEKHG4BQ96PX9 1271 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 SMIM14Q96QK8 99 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 SMC6Q96SB8 1091 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 TCF12Q99081 682 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 AGAP2Q99490 1192 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 SH3GL2Q99962 352 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 WRAP53Q9BUR4 548 aaKnown RBP9.74□□□□□ -0.85
CCM2-204ENST00000470837 SPATA16Q9BXB7 569 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms