RNA–Protein interactions for RNA: ENST00000469930.1

BRAF-202, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene BRAF, Length 1,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-202ENST00000469930 HORMAD1Q86X24 394 aa20.77■□□□□ 0.92
BRAF-202ENST00000469930 CADM4Q8NFZ8 388 aa20.77■□□□□ 0.92
BRAF-202ENST00000469930 OR13J1Q8NGT2 312 aa20.77■□□□□ 0.92
BRAF-202ENST00000469930 HNRNPLLQ8WVV9 542 aaKnown RBP20.77■□□□□ 0.92
BRAF-202ENST00000469930 TOE1Q96GM8 510 aaKnown RBP20.77■□□□□ 0.92
BRAF-202ENST00000469930 CDKN2AIPNLQ96HQ2 116 aa20.77■□□□□ 0.92
BRAF-202ENST00000469930 CD93Q9NPY3 652 aa20.77■□□□□ 0.92
BRAF-202ENST00000469930 CYP8B1Q9UNU6 501 aa20.77■□□□□ 0.92
BRAF-202ENST00000469930 ZFR2Q9UPR6 939 aaKnown RBP20.77■□□□□ 0.92
BRAF-202ENST00000469930 RPS6KL1Q9Y6S9 549 aa20.77■□□□□ 0.92
BRAF-202ENST00000469930 ZCWPW2A0A1B0GU75 182 aa20.76■□□□□ 0.91
BRAF-202ENST00000469930 WNT9AO14904 365 aa20.76■□□□□ 0.91
BRAF-202ENST00000469930 LATO43561 262 aa20.76■□□□□ 0.91
BRAF-202ENST00000469930 RNGTTO60942 597 aaKnown RBP20.76■□□□□ 0.91
BRAF-202ENST00000469930 BANF1O75531 89 aa20.76■□□□□ 0.91
BRAF-202ENST00000469930 TM7SF2O76062 418 aa20.76■□□□□ 0.91
BRAF-202ENST00000469930 PCDH8O95206 1070 aa20.76■□□□□ 0.91
BRAF-202ENST00000469930 C6P13671 934 aa20.76■□□□□ 0.91
BRAF-202ENST00000469930 PAMP19021 973 aa20.76■□□□□ 0.91
BRAF-202ENST00000469930 NMBRP28336 390 aa20.76■□□□□ 0.91
BRAF-202ENST00000469930 DPTQ07507 201 aa20.76■□□□□ 0.91
BRAF-202ENST00000469930 MTM1Q13496 603 aa20.76■□□□□ 0.91
BRAF-202ENST00000469930 SEPT6Q14141 434 aa20.76■□□□□ 0.91
BRAF-202ENST00000469930 FASTKD3Q14CZ7 662 aaKnown RBP20.76■□□□□ 0.91
BRAF-202ENST00000469930 CCDC25Q86WR0 208 aa20.76■□□□□ 0.91
BRAF-202ENST00000469930 OR4K2Q8NGD2 314 aa20.76■□□□□ 0.91
BRAF-202ENST00000469930 SCG3Q8WXD2 468 aaKnown RBP20.76■□□□□ 0.91
BRAF-202ENST00000469930 DTD2Q96FN9 168 aa20.76■□□□□ 0.91
BRAF-202ENST00000469930 SPACA7Q96KW9 195 aa20.76■□□□□ 0.91
BRAF-202ENST00000469930 ZNF778Q96MU6 729 aa20.76■□□□□ 0.91
BRAF-202ENST00000469930 LENG8Q96PV6 779 aaPredicted RBP20.76■□□□□ 0.91
BRAF-202ENST00000469930 TPSD1Q9BZJ3 242 aa20.76■□□□□ 0.91
BRAF-202ENST00000469930 PLAC1Q9HBJ0 212 aa20.76■□□□□ 0.91
BRAF-202ENST00000469930 APPL1Q9UKG1 709 aa20.76■□□□□ 0.91
BRAF-202ENST00000469930 CHMP2BQ9UQN3 213 aa20.76■□□□□ 0.91
BRAF-202ENST00000469930 KCTD3Q9Y597 815 aa20.76■□□□□ 0.91
BRAF-202ENST00000469930 MYLKQ15746 1914 aa20.75■□□□□ 0.91
BRAF-202ENST00000469930 TBC1D3DA0A087WVF3 549 aa20.75■□□□□ 0.91
BRAF-202ENST00000469930 TBC1D3IA0A087WXS9 549 aa20.75■□□□□ 0.91
BRAF-202ENST00000469930 TBC1D3EA0A087X179 549 aa20.75■□□□□ 0.91
BRAF-202ENST00000469930 TBC1D3KA0A087X1G2 549 aa20.75■□□□□ 0.91
BRAF-202ENST00000469930 TBC1D3FA6NER0 549 aaPredicted RBP20.75■□□□□ 0.91
BRAF-202ENST00000469930 A8MX80 341 aa20.75■□□□□ 0.91
BRAF-202ENST00000469930 TBC1D3LB9A6J9 549 aa20.75■□□□□ 0.91
BRAF-202ENST00000469930 MMP20O60882 483 aa20.75■□□□□ 0.91
BRAF-202ENST00000469930 RPP40O75818 363 aaKnown RBP20.75■□□□□ 0.91
BRAF-202ENST00000469930 TBC1D3HP0C7X1 549 aa20.75■□□□□ 0.91
BRAF-202ENST00000469930 BPIP17213 487 aa20.75■□□□□ 0.91
BRAF-202ENST00000469930 TEAD1P28347 426 aa20.75■□□□□ 0.91
BRAF-202ENST00000469930 CNR2P34972 360 aa20.75■□□□□ 0.91
BRAF-202ENST00000469930 SEMG2Q02383 582 aa20.75■□□□□ 0.91
BRAF-202ENST00000469930 CRYMQ14894 314 aa20.75■□□□□ 0.91
BRAF-202ENST00000469930 ZNF284Q2VY69 593 aa20.75■□□□□ 0.91
BRAF-202ENST00000469930 PDPK2PQ6A1A2 396 aa20.75■□□□□ 0.91
BRAF-202ENST00000469930 TBC1D3GQ6DHY5 549 aa20.75■□□□□ 0.91
BRAF-202ENST00000469930 TBC1D3CQ6IPX1 549 aa20.75■□□□□ 0.91
BRAF-202ENST00000469930 ESRP1Q6NXG1 681 aaKnown RBP20.75■□□□□ 0.91
BRAF-202ENST00000469930 UNC5AQ6ZN44 842 aa20.75■□□□□ 0.91
BRAF-202ENST00000469930 PALM2Q8IXS6 379 aa20.75■□□□□ 0.91
BRAF-202ENST00000469930 TBC1D3Q8IZP1 549 aaPredicted RBP20.75■□□□□ 0.91
BRAF-202ENST00000469930 MREGQ8N565 214 aa20.75■□□□□ 0.91
BRAF-202ENST00000469930 MFSD3Q96ES6 412 aa20.75■□□□□ 0.91
BRAF-202ENST00000469930 DNAJC1Q96KC8 554 aaKnown RBP20.75■□□□□ 0.91
BRAF-202ENST00000469930 FCRL3Q96P31 734 aaPredicted RBP20.75■□□□□ 0.91
BRAF-202ENST00000469930 WRAP53Q9BUR4 548 aaKnown RBP20.75■□□□□ 0.91
BRAF-202ENST00000469930 C1QTNF1Q9BXJ1 281 aa20.75■□□□□ 0.91
BRAF-202ENST00000469930 LRRC4CQ9HCJ2 640 aa20.75■□□□□ 0.91
BRAF-202ENST00000469930 MOCS1Q9NZB8 636 aa20.75■□□□□ 0.91
BRAF-202ENST00000469930 SCN8AQ9UQD0 1980 aa20.74■□□□□ 0.91
BRAF-202ENST00000469930 A0A1W2PQU0 124 aa20.74■□□□□ 0.91
BRAF-202ENST00000469930 IGLON5A6NGN9 336 aa20.74■□□□□ 0.91
BRAF-202ENST00000469930 AGAP14A8MT82 685 aa20.74■□□□□ 0.91
BRAF-202ENST00000469930 LZTS3O60299 673 aaPredicted RBP20.74■□□□□ 0.91
BRAF-202ENST00000469930 ERLIN1O75477 346 aa20.74■□□□□ 0.91
BRAF-202ENST00000469930 RECQL5O94762 991 aaPredicted RBP20.74■□□□□ 0.91
BRAF-202ENST00000469930 PYGLP06737 847 aa20.74■□□□□ 0.91
BRAF-202ENST00000469930 SPAM1P38567 509 aa20.74■□□□□ 0.91
BRAF-202ENST00000469930 ARCN1P48444 511 aaKnown RBP20.74■□□□□ 0.91
BRAF-202ENST00000469930 PXNP49023 591 aaPredicted RBP20.74■□□□□ 0.91
BRAF-202ENST00000469930 PMS2P54278 862 aa20.74■□□□□ 0.91
BRAF-202ENST00000469930 XIAPP98170 497 aa20.74■□□□□ 0.91
BRAF-202ENST00000469930 ACOX1Q15067 660 aa20.74■□□□□ 0.91
BRAF-202ENST00000469930 KIAA0895LQ68EN5 471 aa20.74■□□□□ 0.91
BRAF-202ENST00000469930 Q6ZVL8 140 aa20.74■□□□□ 0.91
BRAF-202ENST00000469930 FAM124AQ86V42 546 aa20.74■□□□□ 0.91
BRAF-202ENST00000469930 ANKMY2Q8IV38 441 aa20.74■□□□□ 0.91
BRAF-202ENST00000469930 LMNTD2Q8IXW0 634 aa20.74■□□□□ 0.91
BRAF-202ENST00000469930 GSPT2Q8IYD1 628 aaKnown RBP20.74■□□□□ 0.91
BRAF-202ENST00000469930 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.74■□□□□ 0.91
BRAF-202ENST00000469930 DENND6BQ8NEG7 585 aa20.74■□□□□ 0.91
BRAF-202ENST00000469930 OR13C4Q8NGS5 318 aa20.74■□□□□ 0.91
BRAF-202ENST00000469930 GSDMBQ8TAX9 411 aa20.74■□□□□ 0.91
BRAF-202ENST00000469930 ZNF669Q96BR6 464 aaPredicted RBP20.74■□□□□ 0.91
BRAF-202ENST00000469930 C9orf72Q96LT7 481 aa20.74■□□□□ 0.91
BRAF-202ENST00000469930 C1QTNF7Q9BXJ2 289 aa20.74■□□□□ 0.91
BRAF-202ENST00000469930 SLC17A9Q9BYT1 436 aa20.74■□□□□ 0.91
BRAF-202ENST00000469930 CDC42EP4Q9H3Q1 356 aaKnown RBP20.74■□□□□ 0.91
BRAF-202ENST00000469930 FAM83DQ9H4H8 585 aa20.74■□□□□ 0.91
BRAF-202ENST00000469930 NINJ2Q9NZG7 142 aa20.74■□□□□ 0.91
BRAF-202ENST00000469930 SLC2A6Q9UGQ3 507 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms