RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 MAGEA11P43364 429 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 FMO5P49326 533 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 VAV2P52735 878 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 ZNF134P52741 427 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 RPS7P62081 194 aaKnown RBP6.5□□□□□ -1.37
PTCD3-208ENST00000469585 TUBA3CQ13748 450 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 KCNJ12Q14500 433 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 IQCB1Q15051 598 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 EXOC3L4Q17RC7 722 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 SOWAHAQ2M3V2 549 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 KLHL40Q2TBA0 621 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 CFAP221Q4G0U5 840 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 ZCWPW2Q504Y3 356 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 FNDC7Q5VTL7 733 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 DCAF12L1Q5VU92 463 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 SP5Q6BEB4 398 aaPredicted RBP6.5□□□□□ -1.37
PTCD3-208ENST00000469585 TTI2Q6NXR4 508 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 TUBA3EQ6PEY2 450 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 SUGP1Q8IWZ8 645 aaKnown RBP6.5□□□□□ -1.37
PTCD3-208ENST00000469585 ADGRG5Q8IZF4 528 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 ARHGAP18Q8N392 663 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 ATAD1Q8NBU5 361 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 MYCBPAPQ8TBZ2 947 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 SUSD6Q92537 303 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 PSMG2Q969U7 264 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 ZC3H10Q96K80 434 aaKnown RBP6.5□□□□□ -1.37
PTCD3-208ENST00000469585 MESP1Q9BRJ9 268 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 TRIM62Q9BVG3 475 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 S1PR5Q9H228 398 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 POMKQ9H5K3 350 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 UNKLQ9H9P5 680 aaKnown RBP6.5□□□□□ -1.37
PTCD3-208ENST00000469585 ZFP14Q9HCL3 533 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 PNPLA8Q9NP80 782 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 SLC2A4RGQ9NR83 387 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 SIX4Q9UIU6 781 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 GTF3C4Q9UKN8 822 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 MRPS17Q9Y2R5 130 aaKnown RBP6.5□□□□□ -1.37
PTCD3-208ENST00000469585 NFE2L3Q9Y4A8 694 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 DAAM1Q9Y4D1 1078 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 HS3ST4Q9Y661 456 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 LAMA3Q16787 3333 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 NCANO14594 1321 aa6.5□□□□□ -1.37
PTCD3-208ENST00000469585 TRAV19A0A0A6YYK7 116 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 GTPBP10A4D1E9 387 aaKnown RBP6.49□□□□□ -1.37
PTCD3-208ENST00000469585 POM121BA6NF01 834 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 PRRG2O14669 202 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 NCAM2O15394 837 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 SOAT2O75908 522 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 SPDEFO95238 335 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 SERPINC1P01008 464 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 TPM1P09493 284 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 WEE2P0C1S8 567 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 ATXN1LP0C7T5 689 aaKnown RBP6.49□□□□□ -1.37
PTCD3-208ENST00000469585 HAPLN1P10915 354 aaPredicted RBP6.49□□□□□ -1.37
PTCD3-208ENST00000469585 RALAP11233 206 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 BDNFP23560 247 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 GABRR2P28476 465 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 SERPINB3P29508 390 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 NDST1P52848 882 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 SCAPQ12770 1279 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 LRMPQ12912 555 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 TDGQ13569 410 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 CUL2Q13617 745 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 KCNC3Q14003 757 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 HLXQ14774 488 aaPredicted RBP6.49□□□□□ -1.37
PTCD3-208ENST00000469585 DPCR1Q3MIW9 517 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 CD300EQ496F6 205 aaPredicted RBP6.49□□□□□ -1.37
PTCD3-208ENST00000469585 C1orf228Q6PIY5 440 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 DENND5BQ6ZUT9 1274 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 ACOT1Q86TX2 421 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 GAS2L3Q86XJ1 694 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 SIX6OS1Q8N1H7 587 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 MPP5Q8N3R9 675 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 OR10T2Q8NGX3 314 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 CSGALNACT1Q8TDX6 532 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 TAS1R2Q8TE23 839 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 ING5Q8WYH8 240 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 SLC35C1Q96A29 364 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 MYLPFQ96A32 169 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 JAKMIP2Q96AA8 810 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 SPATA17Q96L03 361 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 TUBGCP2Q9BSJ2 902 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 TTYH3Q9C0H2 523 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 MS4A7Q9GZW8 240 aaPredicted RBP6.49□□□□□ -1.37
PTCD3-208ENST00000469585 MIS12Q9H081 205 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 SMYD3Q9H7B4 428 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 SYNCQ9H7C4 482 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 KIF9Q9HAQ2 790 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 TRPC7Q9HCX4 862 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 TLR8Q9NR97 1041 aaKnown RBP6.49□□□□□ -1.37
PTCD3-208ENST00000469585 COMMD8Q9NX08 183 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 PTPRJQ12913 1337 aa6.49□□□□□ -1.37
PTCD3-208ENST00000469585 C2CD4DB7Z1M9 353 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 LOC730098B7Z3J9 87 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 ADAM12O43184 909 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 PAEPP09466 180 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 LAMP2P13473 410 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 CYP2F1P24903 491 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 YWHAQP27348 245 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 ADORA2BP29275 332 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms