RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 SQSTM1Q13501 440 aa13.06□□□□□ -0.32
PTPN7-207ENST00000468385 SYCP1Q15431 976 aa13.06□□□□□ -0.32
PTPN7-207ENST00000468385 SKIDA1Q1XH10 827 aa13.06□□□□□ -0.32
PTPN7-207ENST00000468385 FKBP15Q5T1M5 1219 aa13.06□□□□□ -0.32
PTPN7-207ENST00000468385 DCUN1D2Q6PH85 259 aa13.06□□□□□ -0.32
PTPN7-207ENST00000468385 RFX8Q6ZV50 586 aa13.06□□□□□ -0.32
PTPN7-207ENST00000468385 TP53INP2Q8IXH6 220 aa13.06□□□□□ -0.32
PTPN7-207ENST00000468385 MCOLN2Q8IZK6 566 aa13.06□□□□□ -0.32
PTPN7-207ENST00000468385 ARFGAP1Q8N6T3 406 aa13.06□□□□□ -0.32
PTPN7-207ENST00000468385 AGBL5Q8NDL9 886 aa13.06□□□□□ -0.32
PTPN7-207ENST00000468385 ENOX1Q8TC92 643 aaKnown RBP13.06□□□□□ -0.32
PTPN7-207ENST00000468385 ART4Q93070 314 aa13.06□□□□□ -0.32
PTPN7-207ENST00000468385 DTD2Q96FN9 168 aa13.06□□□□□ -0.32
PTPN7-207ENST00000468385 PEBP4Q96S96 227 aa13.06□□□□□ -0.32
PTPN7-207ENST00000468385 AGPAT1Q99943 283 aa13.06□□□□□ -0.32
PTPN7-207ENST00000468385 SNRNP25Q9BV90 132 aaKnown RBP13.06□□□□□ -0.32
PTPN7-207ENST00000468385 OCIAD1Q9NX40 245 aa13.06□□□□□ -0.32
PTPN7-207ENST00000468385 KCTD5Q9NXV2 234 aa13.06□□□□□ -0.32
PTPN7-207ENST00000468385 ANKMY1Q9P2S6 941 aa13.06□□□□□ -0.32
PTPN7-207ENST00000468385 SEPT3Q9UH03 358 aa13.06□□□□□ -0.32
PTPN7-207ENST00000468385 TUBD1Q9UJT1 453 aa13.06□□□□□ -0.32
PTPN7-207ENST00000468385 SLC17A4Q9Y2C5 497 aa13.06□□□□□ -0.32
PTPN7-207ENST00000468385 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.05□□□□□ -0.32
PTPN7-207ENST00000468385 B4E171 279 aa13.05□□□□□ -0.32
PTPN7-207ENST00000468385 EIF3CLB5ME19 914 aaKnown RBP13.05□□□□□ -0.32
PTPN7-207ENST00000468385 RAD1O60671 282 aa13.05□□□□□ -0.32
PTPN7-207ENST00000468385 IVLP07476 585 aa13.05□□□□□ -0.32
PTPN7-207ENST00000468385 CR2P20023 1033 aa13.05□□□□□ -0.32
PTPN7-207ENST00000468385 LHCGRP22888 699 aa13.05□□□□□ -0.32
PTPN7-207ENST00000468385 TEAD1P28347 426 aa13.05□□□□□ -0.32
PTPN7-207ENST00000468385 VIPR1P32241 457 aa13.05□□□□□ -0.32
PTPN7-207ENST00000468385 CSTF2P33240 577 aaKnown RBP eCLIP13.05□□□□□ -0.32
PTPN7-207ENST00000468385 ADCY8P40145 1251 aa13.05□□□□□ -0.32
PTPN7-207ENST00000468385 TSPAN7P41732 249 aa13.05□□□□□ -0.32
PTPN7-207ENST00000468385 RENBPP51606 427 aa13.05□□□□□ -0.32
PTPN7-207ENST00000468385 SLC10A7Q0GE19 358 aa13.05□□□□□ -0.32
PTPN7-207ENST00000468385 BIRC2Q13490 618 aa13.05□□□□□ -0.32
PTPN7-207ENST00000468385 LBRQ14739 615 aaKnown RBP13.05□□□□□ -0.32
PTPN7-207ENST00000468385 ERMARDQ5T6L9 678 aa13.05□□□□□ -0.32
PTPN7-207ENST00000468385 DENND2CQ68D51 928 aa13.05□□□□□ -0.32
PTPN7-207ENST00000468385 ACAD10Q6JQN1 1059 aa13.05□□□□□ -0.32
PTPN7-207ENST00000468385 HSD11B1LQ7Z5J1 315 aa13.05□□□□□ -0.32
PTPN7-207ENST00000468385 CACNA2D3Q8IZS8 1091 aa13.05□□□□□ -0.32
PTPN7-207ENST00000468385 CCDC112Q8NEF3 446 aa13.05□□□□□ -0.32
PTPN7-207ENST00000468385 EIF3CQ99613 913 aaKnown RBP13.05□□□□□ -0.32
PTPN7-207ENST00000468385 SLC39A1Q9NY26 324 aa13.05□□□□□ -0.32
PTPN7-207ENST00000468385 PCSK1NQ9UHG2 260 aa13.05□□□□□ -0.32
PTPN7-207ENST00000468385 PLEKHM1Q9Y4G2 1056 aa13.05□□□□□ -0.32
PTPN7-207ENST00000468385 PCDHGC4Q9Y5F7 938 aa13.05□□□□□ -0.32
PTPN7-207ENST00000468385 ZFC3H1O60293 1989 aaKnown RBP13.05□□□□□ -0.32
PTPN7-207ENST00000468385 A0A1W2PQ67 120 aa13.04□□□□□ -0.32
PTPN7-207ENST00000468385 EFCAB7A8K855 629 aa13.04□□□□□ -0.32
PTPN7-207ENST00000468385 ZNF891A8MT65 544 aaPredicted RBP13.04□□□□□ -0.32
PTPN7-207ENST00000468385 DAPK3O43293 454 aa13.04□□□□□ -0.32
PTPN7-207ENST00000468385 SOCS5O75159 536 aa13.04□□□□□ -0.32
PTPN7-207ENST00000468385 PEX11BO96011 259 aa13.04□□□□□ -0.32
PTPN7-207ENST00000468385 CPP00450 1065 aa13.04□□□□□ -0.32
PTPN7-207ENST00000468385 DESP17661 470 aa13.04□□□□□ -0.32
PTPN7-207ENST00000468385 PSMA2P25787 234 aa13.04□□□□□ -0.32
PTPN7-207ENST00000468385 ACTR1BP42025 376 aa13.04□□□□□ -0.32
PTPN7-207ENST00000468385 CCR10P46092 362 aa13.04□□□□□ -0.32
PTPN7-207ENST00000468385 ACTR1AP61163 376 aa13.04□□□□□ -0.32
PTPN7-207ENST00000468385 MAMLD1Q13495 774 aa13.04□□□□□ -0.32
PTPN7-207ENST00000468385 UBAP2LQ14157 1087 aaKnown RBP13.04□□□□□ -0.32
PTPN7-207ENST00000468385 PTPRRQ15256 657 aa13.04□□□□□ -0.32
PTPN7-207ENST00000468385 TMCO4Q5TGY1 634 aa13.04□□□□□ -0.32
PTPN7-207ENST00000468385 ANKS6Q68DC2 871 aa13.04□□□□□ -0.32
PTPN7-207ENST00000468385 RAET1GQ6H3X3 334 aa13.04□□□□□ -0.32
PTPN7-207ENST00000468385 TMEM71Q6P5X7 295 aa13.04□□□□□ -0.32
PTPN7-207ENST00000468385 Q6ZVL8 140 aa13.04□□□□□ -0.32
PTPN7-207ENST00000468385 CYP4V2Q6ZWL3 525 aaPredicted RBP13.04□□□□□ -0.32
PTPN7-207ENST00000468385 PGBD5Q8N414 524 aa13.04□□□□□ -0.32
PTPN7-207ENST00000468385 BMPERQ8N8U9 685 aa13.04□□□□□ -0.32
PTPN7-207ENST00000468385 NEK11Q8NG66 645 aa13.04□□□□□ -0.32
PTPN7-207ENST00000468385 PDCD6IPQ8WUM4 868 aaKnown RBP13.04□□□□□ -0.32
PTPN7-207ENST00000468385 SCARF2Q96GP6 870 aaPredicted RBP13.04□□□□□ -0.32
PTPN7-207ENST00000468385 ZNF599Q96NL3 588 aa13.04□□□□□ -0.32
PTPN7-207ENST00000468385 DPYSL5Q9BPU6 564 aa13.04□□□□□ -0.32
PTPN7-207ENST00000468385 ASPSCR1Q9BZE9 553 aa13.04□□□□□ -0.32
PTPN7-207ENST00000468385 SPRY4Q9C004 299 aa13.04□□□□□ -0.32
PTPN7-207ENST00000468385 NUP62CLQ9H1M0 184 aa13.04□□□□□ -0.32
PTPN7-207ENST00000468385 KCNK4Q9NYG8 393 aa13.04□□□□□ -0.32
PTPN7-207ENST00000468385 TAS2R14Q9NYV8 317 aa13.04□□□□□ -0.32
PTPN7-207ENST00000468385 PDP2Q9P2J9 529 aa13.04□□□□□ -0.32
PTPN7-207ENST00000468385 PILRAQ9UKJ1 303 aa13.04□□□□□ -0.32
PTPN7-207ENST00000468385 DOPEY2Q9Y3R5 2298 aa13.03□□□□□ -0.32
PTPN7-207ENST00000468385 CLEC18AA5D8T8 446 aa13.03□□□□□ -0.32
PTPN7-207ENST00000468385 GOLGA6CA6NDK9 693 aa13.03□□□□□ -0.32
PTPN7-207ENST00000468385 GOLGA6BA6NDN3 693 aa13.03□□□□□ -0.32
PTPN7-207ENST00000468385 NPIPB15A6NHN6 443 aaPredicted RBP13.03□□□□□ -0.32
PTPN7-207ENST00000468385 PSMD11O00231 422 aa13.03□□□□□ -0.32
PTPN7-207ENST00000468385 NKX2-8O15522 239 aa13.03□□□□□ -0.32
PTPN7-207ENST00000468385 DUX1O43812 170 aa13.03□□□□□ -0.32
PTPN7-207ENST00000468385 SOD1P00441 154 aa13.03□□□□□ -0.32
PTPN7-207ENST00000468385 TPM2P07951 284 aa13.03□□□□□ -0.32
PTPN7-207ENST00000468385 GOLGA6DP0CG33 693 aa13.03□□□□□ -0.32
PTPN7-207ENST00000468385 CYP2A6P11509 494 aaPredicted RBP13.03□□□□□ -0.32
PTPN7-207ENST00000468385 CASRP41180 1078 aa13.03□□□□□ -0.32
PTPN7-207ENST00000468385 COPB1P53618 953 aaKnown RBP13.03□□□□□ -0.32
PTPN7-207ENST00000468385 RAB15P59190 212 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms