RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 MAP3K6O95382 1288 aa24.45■■□□□ 1.5
PTCH1-210ENST00000468211 CYP2A6P11509 494 aaPredicted RBP24.45■■□□□ 1.5
PTCH1-210ENST00000468211 CCNB1P14635 433 aa24.45■■□□□ 1.5
PTCH1-210ENST00000468211 PNLIPP16233 465 aa24.45■■□□□ 1.5
PTCH1-210ENST00000468211 AK4P27144 223 aaPredicted RBP24.45■■□□□ 1.5
PTCH1-210ENST00000468211 SLC5A2P31639 672 aa24.45■■□□□ 1.5
PTCH1-210ENST00000468211 MAZP56270 477 aaKnown RBP24.45■■□□□ 1.5
PTCH1-210ENST00000468211 UBASH3AP57075 661 aa24.45■■□□□ 1.5
PTCH1-210ENST00000468211 CDK3Q00526 305 aa24.45■■□□□ 1.5
PTCH1-210ENST00000468211 ZFP36L1Q07352 338 aaKnown RBP24.45■■□□□ 1.5
PTCH1-210ENST00000468211 NFKBIBQ15653 356 aa24.45■■□□□ 1.5
PTCH1-210ENST00000468211 RALGPS1Q5JS13 557 aa24.45■■□□□ 1.5
PTCH1-210ENST00000468211 ARMC12Q5T9G4 340 aa24.45■■□□□ 1.5
PTCH1-210ENST00000468211 ALKBH5Q6P6C2 394 aaKnown RBP24.45■■□□□ 1.5
PTCH1-210ENST00000468211 TECPR1Q7Z6L1 1165 aa24.45■■□□□ 1.5
PTCH1-210ENST00000468211 NSMCE1Q8WV22 266 aa24.45■■□□□ 1.5
PTCH1-210ENST00000468211 CCDC97Q96F63 343 aaPredicted RBP24.45■■□□□ 1.5
PTCH1-210ENST00000468211 TMEM74Q96NL1 305 aa24.45■■□□□ 1.5
PTCH1-210ENST00000468211 SEMA3CQ99985 751 aa24.45■■□□□ 1.5
PTCH1-210ENST00000468211 NENFQ9UMX5 172 aa24.45■■□□□ 1.5
PTCH1-210ENST00000468211 PPIL1Q9Y3C6 166 aa24.45■■□□□ 1.5
PTCH1-210ENST00000468211 GOLGA6CA6NDK9 693 aa24.44■■□□□ 1.5
PTCH1-210ENST00000468211 GOLGA6BA6NDN3 693 aa24.44■■□□□ 1.5
PTCH1-210ENST00000468211 B4GAT1O43505 415 aa24.44■■□□□ 1.5
PTCH1-210ENST00000468211 FZD6O60353 706 aa24.44■■□□□ 1.5
PTCH1-210ENST00000468211 GYPCP04921 128 aa24.44■■□□□ 1.5
PTCH1-210ENST00000468211 FGF1P05230 155 aa24.44■■□□□ 1.5
PTCH1-210ENST00000468211 GOLGA6DP0CG33 693 aa24.44■■□□□ 1.5
PTCH1-210ENST00000468211 SSR1P43307 286 aaKnown RBP24.44■■□□□ 1.5
PTCH1-210ENST00000468211 GNPDA1P46926 289 aa24.44■■□□□ 1.5
PTCH1-210ENST00000468211 B4GALNT1Q00973 533 aa24.44■■□□□ 1.5
PTCH1-210ENST00000468211 RHDQ02161 417 aa24.44■■□□□ 1.5
PTCH1-210ENST00000468211 EIF3IQ13347 325 aaKnown RBP24.44■■□□□ 1.5
PTCH1-210ENST00000468211 DPYSL3Q14195 570 aa24.44■■□□□ 1.5
PTCH1-210ENST00000468211 TSR1Q2NL82 804 aaKnown RBP24.44■■□□□ 1.5
PTCH1-210ENST00000468211 TAF1BQ53T94 588 aaPredicted RBP24.44■■□□□ 1.5
PTCH1-210ENST00000468211 CCDC122Q5T0U0 273 aa24.44■■□□□ 1.5
PTCH1-210ENST00000468211 NCBP2-AS2Q69YL0 99 aa24.44■■□□□ 1.5
PTCH1-210ENST00000468211 C17orf82Q86X59 251 aaPredicted RBP24.44■■□□□ 1.5
PTCH1-210ENST00000468211 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP24.44■■□□□ 1.5
PTCH1-210ENST00000468211 LRRN4Q8WUT4 740 aa24.44■■□□□ 1.5
PTCH1-210ENST00000468211 TTC9Q92623 222 aa24.44■■□□□ 1.5
PTCH1-210ENST00000468211 SEMA4CQ9C0C4 833 aa24.44■■□□□ 1.5
PTCH1-210ENST00000468211 STRADBQ9C0K7 418 aa24.44■■□□□ 1.5
PTCH1-210ENST00000468211 GOLGA6AQ9NYA3 693 aa24.44■■□□□ 1.5
PTCH1-210ENST00000468211 RCOR3Q9P2K3 495 aaPredicted RBP24.44■■□□□ 1.5
PTCH1-210ENST00000468211 CD84Q9UIB8 345 aa24.44■■□□□ 1.5
PTCH1-210ENST00000468211 SUFUQ9UMX1 484 aa24.44■■□□□ 1.5
PTCH1-210ENST00000468211 PCDHGA7Q9Y5G6 932 aa24.44■■□□□ 1.5
PTCH1-210ENST00000468211 TMX2-CTNND1H3BSU7 103 aa24.43■■□□□ 1.5
PTCH1-210ENST00000468211 K7ENP7 123 aa24.43■■□□□ 1.5
PTCH1-210ENST00000468211 MYO1FO00160 1098 aa24.43■■□□□ 1.5
PTCH1-210ENST00000468211 PSMD11O00231 422 aa24.43■■□□□ 1.5
PTCH1-210ENST00000468211 EFSO43281 561 aa24.43■■□□□ 1.5
PTCH1-210ENST00000468211 NUDT21O43809 227 aaKnown RBP24.43■■□□□ 1.5
PTCH1-210ENST00000468211 SOD1P00441 154 aa24.43■■□□□ 1.5
PTCH1-210ENST00000468211 ITIH1P19827 911 aa24.43■■□□□ 1.5
PTCH1-210ENST00000468211 GJC1P36383 396 aa24.43■■□□□ 1.5
PTCH1-210ENST00000468211 CFHR1Q03591 330 aa24.43■■□□□ 1.5
PTCH1-210ENST00000468211 GALNT2Q10471 571 aa24.43■■□□□ 1.5
PTCH1-210ENST00000468211 ARHGEF7Q14155 803 aa24.43■■□□□ 1.5
PTCH1-210ENST00000468211 TGIF1Q15583 401 aa24.43■■□□□ 1.5
PTCH1-210ENST00000468211 ZSCAN23Q3MJ62 389 aa24.43■■□□□ 1.5
PTCH1-210ENST00000468211 KIAA1614Q5VZ46 1190 aa24.43■■□□□ 1.5
PTCH1-210ENST00000468211 RAET1GQ6H3X3 334 aa24.43■■□□□ 1.5
PTCH1-210ENST00000468211 INO80CQ6PI98 192 aaPredicted RBP24.43■■□□□ 1.5
PTCH1-210ENST00000468211 JAMLQ86YT9 394 aa24.43■■□□□ 1.5
PTCH1-210ENST00000468211 PATE1Q8WXA2 126 aa24.43■■□□□ 1.5
PTCH1-210ENST00000468211 TAAR2Q9P1P5 351 aa24.43■■□□□ 1.5
PTCH1-210ENST00000468211 PISDQ9UG56 409 aa24.43■■□□□ 1.5
PTCH1-210ENST00000468211 PLEKHM1Q9Y4G2 1056 aa24.43■■□□□ 1.5
PTCH1-210ENST00000468211 LOXL2Q9Y4K0 774 aa24.43■■□□□ 1.5
PTCH1-210ENST00000468211 COL6A6A6NMZ7 2263 aa24.43■■□□□ 1.5
PTCH1-210ENST00000468211 PIEZO2Q9H5I5 2752 aa24.42■■□□□ 1.5
PTCH1-210ENST00000468211 ETV5P41161 510 aa24.42■■□□□ 1.5
PTCH1-210ENST00000468211 GARSP41250 739 aaKnown RBP24.42■■□□□ 1.5
PTCH1-210ENST00000468211 OR1D5P58170 312 aa24.42■■□□□ 1.5
PTCH1-210ENST00000468211 DSC2Q02487 901 aa24.42■■□□□ 1.5
PTCH1-210ENST00000468211 ITKQ08881 620 aa24.42■■□□□ 1.5
PTCH1-210ENST00000468211 PAFAH1B3Q15102 231 aaKnown RBP24.42■■□□□ 1.5
PTCH1-210ENST00000468211 LRRC66Q68CR7 880 aa24.42■■□□□ 1.5
PTCH1-210ENST00000468211 USP45Q70EL2 814 aa24.42■■□□□ 1.5
PTCH1-210ENST00000468211 SLITRK4Q8IW52 837 aa24.42■■□□□ 1.5
PTCH1-210ENST00000468211 ZDHHC1Q8WTX9 485 aa24.42■■□□□ 1.5
PTCH1-210ENST00000468211 MAML1Q92585 1016 aa24.42■■□□□ 1.5
PTCH1-210ENST00000468211 ABCG8Q9H221 673 aa24.42■■□□□ 1.5
PTCH1-210ENST00000468211 SEMA6CQ9H3T2 930 aa24.42■■□□□ 1.5
PTCH1-210ENST00000468211 RDH14Q9HBH5 336 aa24.42■■□□□ 1.5
PTCH1-210ENST00000468211 TRNAU1APQ9NX07 287 aaKnown RBP24.42■■□□□ 1.5
PTCH1-210ENST00000468211 KCTD5Q9NXV2 234 aa24.42■■□□□ 1.5
PTCH1-210ENST00000468211 SLC17A4Q9Y2C5 497 aa24.42■■□□□ 1.5
PTCH1-210ENST00000468211 ECEL1O95672 775 aa24.41■■□□□ 1.5
PTCH1-210ENST00000468211 TEAD1P28347 426 aa24.41■■□□□ 1.5
PTCH1-210ENST00000468211 TAS2R40P59535 323 aa24.41■■□□□ 1.5
PTCH1-210ENST00000468211 CTBSQ01459 385 aa24.41■■□□□ 1.5
PTCH1-210ENST00000468211 PTSQ03393 145 aa24.41■■□□□ 1.5
PTCH1-210ENST00000468211 DPTQ07507 201 aa24.41■■□□□ 1.5
PTCH1-210ENST00000468211 ILF3Q12906 894 aaKnown RBP eCLIP24.41■■□□□ 1.5
PTCH1-210ENST00000468211 SRSF6Q13247 344 aaKnown RBP24.41■■□□□ 1.5
PTCH1-210ENST00000468211 LY6DQ14210 128 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms