RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 SUOXP51687 545 aa11.62□□□□□ -0.55
VPS26A-204ENST00000467852 VAV2P52735 878 aa11.62□□□□□ -0.55
VPS26A-204ENST00000467852 SNRPD1P62314 119 aaKnown RBP11.62□□□□□ -0.55
VPS26A-204ENST00000467852 Q0VFX4 171 aa11.62□□□□□ -0.55
VPS26A-204ENST00000467852 C5orf22Q49AR2 442 aa11.62□□□□□ -0.55
VPS26A-204ENST00000467852 DIEXFQ68CQ4 756 aaKnown RBP11.62□□□□□ -0.55
VPS26A-204ENST00000467852 BEND5Q7L4P6 421 aa11.62□□□□□ -0.55
VPS26A-204ENST00000467852 PLXDC1Q8IUK5 500 aa11.62□□□□□ -0.55
VPS26A-204ENST00000467852 ADAMTS17Q8TE56 1095 aa11.62□□□□□ -0.55
VPS26A-204ENST00000467852 HSFY1Q96LI6 401 aa11.62□□□□□ -0.55
VPS26A-204ENST00000467852 AJAP1Q9UKB5 411 aaPredicted RBP11.62□□□□□ -0.55
VPS26A-204ENST00000467852 LIMCH1Q9UPQ0 1083 aa11.62□□□□□ -0.55
VPS26A-204ENST00000467852 PLEKHM1Q9Y4G2 1056 aa11.62□□□□□ -0.55
VPS26A-204ENST00000467852 TRBV23OR9-2A0A075B6M9 112 aa11.61□□□□□ -0.55
VPS26A-204ENST00000467852 SYNJ2BP-COX16A0A087WUM0 186 aa11.61□□□□□ -0.55
VPS26A-204ENST00000467852 IGLV3-25P01717 112 aa11.61□□□□□ -0.55
VPS26A-204ENST00000467852 PBX1P40424 430 aa11.61□□□□□ -0.55
VPS26A-204ENST00000467852 GNPDA1P46926 289 aa11.61□□□□□ -0.55
VPS26A-204ENST00000467852 SH3BP2P78314 561 aa11.61□□□□□ -0.55
VPS26A-204ENST00000467852 CTBSQ01459 385 aa11.61□□□□□ -0.55
VPS26A-204ENST00000467852 RAD51Q06609 339 aa11.61□□□□□ -0.55
VPS26A-204ENST00000467852 POLD3Q15054 466 aaPredicted RBP11.61□□□□□ -0.55
VPS26A-204ENST00000467852 KNOP1Q1ED39 458 aaKnown RBP11.61□□□□□ -0.55
VPS26A-204ENST00000467852 MYLK3Q32MK0 819 aa11.61□□□□□ -0.55
VPS26A-204ENST00000467852 FCRL6Q6DN72 434 aa11.61□□□□□ -0.55
VPS26A-204ENST00000467852 DUS1LQ6P1R4 473 aaKnown RBP11.61□□□□□ -0.55
VPS26A-204ENST00000467852 GUF1Q8N442 669 aaKnown RBP11.61□□□□□ -0.55
VPS26A-204ENST00000467852 OR7D4Q8NG98 312 aa11.61□□□□□ -0.55
VPS26A-204ENST00000467852 OR2AP1Q8NGE2 309 aa11.61□□□□□ -0.55
VPS26A-204ENST00000467852 NINJ1Q92982 152 aa11.61□□□□□ -0.55
VPS26A-204ENST00000467852 SH3KBP1Q96B97 665 aa11.61□□□□□ -0.55
VPS26A-204ENST00000467852 KCTD12Q96CX2 325 aaKnown RBP11.61□□□□□ -0.55
VPS26A-204ENST00000467852 HMCESQ96FZ2 354 aa11.61□□□□□ -0.55
VPS26A-204ENST00000467852 LGR4Q9BXB1 951 aa11.61□□□□□ -0.55
VPS26A-204ENST00000467852 PANK2Q9BZ23 570 aa11.61□□□□□ -0.55
VPS26A-204ENST00000467852 STN1Q9H668 368 aaKnown RBP11.61□□□□□ -0.55
VPS26A-204ENST00000467852 WDR26Q9H7D7 661 aa11.61□□□□□ -0.55
VPS26A-204ENST00000467852 FAM204AQ9H8W3 233 aa11.61□□□□□ -0.55
VPS26A-204ENST00000467852 AKIRIN1Q9H9L7 192 aaPredicted RBP11.61□□□□□ -0.55
VPS26A-204ENST00000467852 ATP13A1Q9HD20 1204 aa11.61□□□□□ -0.55
VPS26A-204ENST00000467852 COX16Q9P0S2 106 aa11.61□□□□□ -0.55
VPS26A-204ENST00000467852 KIAA1257Q9ULG3 409 aa11.61□□□□□ -0.55
VPS26A-204ENST00000467852 HS3ST4Q9Y661 456 aa11.61□□□□□ -0.55
VPS26A-204ENST00000467852 O00370 1275 aa11.6□□□□□ -0.55
VPS26A-204ENST00000467852 TEX33O43247 280 aa11.6□□□□□ -0.55
VPS26A-204ENST00000467852 ZMPSTE24O75844 475 aa11.6□□□□□ -0.55
VPS26A-204ENST00000467852 GSRP00390 522 aa11.6□□□□□ -0.55
VPS26A-204ENST00000467852 AGAP20933 346 aa11.6□□□□□ -0.55
VPS26A-204ENST00000467852 ERCC5P28715 1186 aaPredicted RBP11.6□□□□□ -0.55
VPS26A-204ENST00000467852 OR1E1P30953 314 aa11.6□□□□□ -0.55
VPS26A-204ENST00000467852 TRIM23P36406 574 aa11.6□□□□□ -0.55
VPS26A-204ENST00000467852 ACTR1BP42025 376 aa11.6□□□□□ -0.55
VPS26A-204ENST00000467852 GCLMP48507 274 aa11.6□□□□□ -0.55
VPS26A-204ENST00000467852 SEPHS1P49903 392 aa11.6□□□□□ -0.55
VPS26A-204ENST00000467852 LIG3P49916 1009 aa11.6□□□□□ -0.55
VPS26A-204ENST00000467852 ACTR1AP61163 376 aa11.6□□□□□ -0.55
VPS26A-204ENST00000467852 LAMB3Q13751 1172 aa11.6□□□□□ -0.55
VPS26A-204ENST00000467852 ALFQ53S48 1182 aa11.6□□□□□ -0.55
VPS26A-204ENST00000467852 C1orf220Q5T0J3 134 aa11.6□□□□□ -0.55
VPS26A-204ENST00000467852 LCLAT1Q6UWP7 414 aa11.6□□□□□ -0.55
VPS26A-204ENST00000467852 WNT2BQ93097 391 aa11.6□□□□□ -0.55
VPS26A-204ENST00000467852 ARSGQ96EG1 525 aa11.6□□□□□ -0.55
VPS26A-204ENST00000467852 SIK2Q9H0K1 926 aa11.6□□□□□ -0.55
VPS26A-204ENST00000467852 EPB41L1Q9H4G0 881 aa11.6□□□□□ -0.55
VPS26A-204ENST00000467852 POPDC2Q9HBU9 364 aa11.6□□□□□ -0.55
VPS26A-204ENST00000467852 SNX7Q9UNH6 387 aa11.6□□□□□ -0.55
VPS26A-204ENST00000467852 ILVBLA1L0T0 632 aa11.59□□□□□ -0.55
VPS26A-204ENST00000467852 RHOBTB3O94955 611 aa11.59□□□□□ -0.55
VPS26A-204ENST00000467852 CLDN14O95500 239 aa11.59□□□□□ -0.55
VPS26A-204ENST00000467852 GGCXP38435 758 aa11.59□□□□□ -0.55
VPS26A-204ENST00000467852 TSFMP43897 325 aaKnown RBP11.59□□□□□ -0.55
VPS26A-204ENST00000467852 SMSP52788 366 aa11.59□□□□□ -0.55
VPS26A-204ENST00000467852 EPHA4P54764 986 aa11.59□□□□□ -0.55
VPS26A-204ENST00000467852 ARF5P84085 180 aa11.59□□□□□ -0.55
VPS26A-204ENST00000467852 OTUD4Q01804 1114 aaKnown RBP11.59□□□□□ -0.55
VPS26A-204ENST00000467852 HHEXQ03014 270 aa11.59□□□□□ -0.55
VPS26A-204ENST00000467852 CDC16Q13042 620 aa11.59□□□□□ -0.55
VPS26A-204ENST00000467852 NFATC2Q13469 925 aa11.59□□□□□ -0.55
VPS26A-204ENST00000467852 EIF4EBP2Q13542 120 aaPredicted RBP11.59□□□□□ -0.55
VPS26A-204ENST00000467852 MYBPC3Q14896 1274 aa11.59□□□□□ -0.55
VPS26A-204ENST00000467852 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.59□□□□□ -0.55
VPS26A-204ENST00000467852 ERAP2Q6P179 960 aa11.59□□□□□ -0.55
VPS26A-204ENST00000467852 FAM180AQ6UWF9 173 aa11.59□□□□□ -0.55
VPS26A-204ENST00000467852 CLEC9AQ6UXN8 241 aa11.59□□□□□ -0.55
VPS26A-204ENST00000467852 MEX3BQ6ZN04 569 aaKnown RBP11.59□□□□□ -0.55
VPS26A-204ENST00000467852 CBARPQ8N350 705 aaPredicted RBP11.59□□□□□ -0.55
VPS26A-204ENST00000467852 ANKK1Q8NFD2 765 aa11.59□□□□□ -0.55
VPS26A-204ENST00000467852 DNAJB8Q8NHS0 232 aa11.59□□□□□ -0.55
VPS26A-204ENST00000467852 SLC37A2Q8TED4 501 aa11.59□□□□□ -0.55
VPS26A-204ENST00000467852 COG1Q8WTW3 980 aa11.59□□□□□ -0.55
VPS26A-204ENST00000467852 EEF2KMTQ96G04 330 aa11.59□□□□□ -0.55
VPS26A-204ENST00000467852 C9orf72Q96LT7 481 aa11.59□□□□□ -0.55
VPS26A-204ENST00000467852 SMR3AQ99954 134 aa11.59□□□□□ -0.55
VPS26A-204ENST00000467852 SLX1AQ9BQ83 275 aa11.59□□□□□ -0.55
VPS26A-204ENST00000467852 MMRN2Q9H8L6 949 aa11.59□□□□□ -0.55
VPS26A-204ENST00000467852 PDE7BQ9NP56 450 aa11.59□□□□□ -0.55
VPS26A-204ENST00000467852 CCM2LQ9NUG4 571 aaPredicted RBP11.59□□□□□ -0.55
VPS26A-204ENST00000467852 OLAHQ9NV23 265 aa11.59□□□□□ -0.55
VPS26A-204ENST00000467852 DMAC2Q9NW81 257 aa11.59□□□□□ -0.55
VPS26A-204ENST00000467852 DDIT4Q9NX09 232 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms