RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 RPL7AP62424 266 aaKnown RBP12.17□□□□□ -0.46
UBR4-211ENST00000467272 POLR2LP62875 67 aaKnown RBP12.17□□□□□ -0.46
UBR4-211ENST00000467272 CDK3Q00526 305 aa12.17□□□□□ -0.46
UBR4-211ENST00000467272 MC2RQ01718 297 aa12.17□□□□□ -0.46
UBR4-211ENST00000467272 OGDHQ02218 1023 aa12.17□□□□□ -0.46
UBR4-211ENST00000467272 DPTQ07507 201 aa12.17□□□□□ -0.46
UBR4-211ENST00000467272 CDC20Q12834 499 aa12.17□□□□□ -0.46
UBR4-211ENST00000467272 CLEC16AQ2KHT3 1053 aa12.17□□□□□ -0.46
UBR4-211ENST00000467272 DCAF12Q5T6F0 453 aa12.17□□□□□ -0.46
UBR4-211ENST00000467272 ANKS6Q68DC2 871 aa12.17□□□□□ -0.46
UBR4-211ENST00000467272 WDR74Q6RFH5 385 aaPredicted RBP12.17□□□□□ -0.46
UBR4-211ENST00000467272 TRIM72Q6ZMU5 477 aa12.17□□□□□ -0.46
UBR4-211ENST00000467272 CYP4V2Q6ZWL3 525 aaPredicted RBP12.17□□□□□ -0.46
UBR4-211ENST00000467272 TECPR1Q7Z6L1 1165 aa12.17□□□□□ -0.46
UBR4-211ENST00000467272 HEATR4Q86WZ0 1026 aa12.17□□□□□ -0.46
UBR4-211ENST00000467272 SFRP1Q8N474 314 aa12.17□□□□□ -0.46
UBR4-211ENST00000467272 ARFGAP1Q8N6T3 406 aa12.17□□□□□ -0.46
UBR4-211ENST00000467272 DTD2Q96FN9 168 aa12.17□□□□□ -0.46
UBR4-211ENST00000467272 TEFMQ96QE5 360 aaKnown RBP12.17□□□□□ -0.46
UBR4-211ENST00000467272 MCCC1Q96RQ3 725 aaPredicted RBP12.17□□□□□ -0.46
UBR4-211ENST00000467272 ZNF71Q9NQZ8 489 aaPredicted RBP12.17□□□□□ -0.46
UBR4-211ENST00000467272 FBXO8Q9NRD0 319 aa12.17□□□□□ -0.46
UBR4-211ENST00000467272 KCTD5Q9NXV2 234 aa12.17□□□□□ -0.46
UBR4-211ENST00000467272 SLC39A1Q9NY26 324 aa12.17□□□□□ -0.46
UBR4-211ENST00000467272 ICE1Q9Y2F5 2266 aa12.17□□□□□ -0.46
UBR4-211ENST00000467272 ZW10O43264 779 aa12.16□□□□□ -0.46
UBR4-211ENST00000467272 CREB3O43889 395 aa12.16□□□□□ -0.46
UBR4-211ENST00000467272 GFPT2O94808 682 aa12.16□□□□□ -0.46
UBR4-211ENST00000467272 DLGAP3O95886 979 aa12.16□□□□□ -0.46
UBR4-211ENST00000467272 MPSTP25325 297 aa12.16□□□□□ -0.46
UBR4-211ENST00000467272 ERCC5P28715 1186 aaPredicted RBP12.16□□□□□ -0.46
UBR4-211ENST00000467272 CSTF2P33240 577 aaKnown RBP eCLIP12.16□□□□□ -0.46
UBR4-211ENST00000467272 SOX5P35711 763 aa12.16□□□□□ -0.46
UBR4-211ENST00000467272 POLD2P49005 469 aa12.16□□□□□ -0.46
UBR4-211ENST00000467272 AP1S1P61966 158 aa12.16□□□□□ -0.46
UBR4-211ENST00000467272 GPLD1P80108 840 aa12.16□□□□□ -0.46
UBR4-211ENST00000467272 BCL2L1Q07817 233 aa12.16□□□□□ -0.46
UBR4-211ENST00000467272 ABHD18Q0P651 414 aa12.16□□□□□ -0.46
UBR4-211ENST00000467272 RFTN1Q14699 578 aaPredicted RBP12.16□□□□□ -0.46
UBR4-211ENST00000467272 CA9Q16790 459 aa12.16□□□□□ -0.46
UBR4-211ENST00000467272 ARHGAP36Q6ZRI8 547 aa12.16□□□□□ -0.46
UBR4-211ENST00000467272 HSD11B1LQ7Z5J1 315 aa12.16□□□□□ -0.46
UBR4-211ENST00000467272 ZNF354CQ86Y25 554 aa12.16□□□□□ -0.46
UBR4-211ENST00000467272 FAM114A1Q8IWE2 563 aa12.16□□□□□ -0.46
UBR4-211ENST00000467272 NLGN4XQ8N0W4 816 aa12.16□□□□□ -0.46
UBR4-211ENST00000467272 NPWQ8N729 165 aa12.16□□□□□ -0.46
UBR4-211ENST00000467272 CCDC112Q8NEF3 446 aa12.16□□□□□ -0.46
UBR4-211ENST00000467272 NLGN4YQ8NFZ3 816 aaPredicted RBP12.16□□□□□ -0.46
UBR4-211ENST00000467272 NUS1Q96E22 293 aa12.16□□□□□ -0.46
UBR4-211ENST00000467272 CELF6Q96J87 481 aaKnown RBP12.16□□□□□ -0.46
UBR4-211ENST00000467272 CNPY3Q9BT09 278 aa12.16□□□□□ -0.46
UBR4-211ENST00000467272 PHPT1Q9NRX4 125 aaPredicted RBP12.16□□□□□ -0.46
UBR4-211ENST00000467272 ADAM22Q9P0K1 906 aa12.16□□□□□ -0.46
UBR4-211ENST00000467272 PPIL1Q9Y3C6 166 aa12.16□□□□□ -0.46
UBR4-211ENST00000467272 PLEKHM1Q9Y4G2 1056 aa12.16□□□□□ -0.46
UBR4-211ENST00000467272 A6NCN8 305 aa12.15□□□□□ -0.46
UBR4-211ENST00000467272 EFCAB7A8K855 629 aa12.15□□□□□ -0.46
UBR4-211ENST00000467272 EIF3CLB5ME19 914 aaKnown RBP12.15□□□□□ -0.46
UBR4-211ENST00000467272 K7EM74 188 aa12.15□□□□□ -0.46
UBR4-211ENST00000467272 PSMD11O00231 422 aa12.15□□□□□ -0.46
UBR4-211ENST00000467272 TEX33O43247 280 aa12.15□□□□□ -0.46
UBR4-211ENST00000467272 PALMO75781 387 aa12.15□□□□□ -0.46
UBR4-211ENST00000467272 EML2O95834 649 aa12.15□□□□□ -0.46
UBR4-211ENST00000467272 ETV3P41162 512 aa12.15□□□□□ -0.46
UBR4-211ENST00000467272 GNPDA1P46926 289 aa12.15□□□□□ -0.46
UBR4-211ENST00000467272 KLK7P49862 253 aa12.15□□□□□ -0.46
UBR4-211ENST00000467272 IL10RBQ08334 325 aa12.15□□□□□ -0.46
UBR4-211ENST00000467272 MAP7Q14244 749 aa12.15□□□□□ -0.46
UBR4-211ENST00000467272 NCAPHQ15003 741 aa12.15□□□□□ -0.46
UBR4-211ENST00000467272 ACOX1Q15067 660 aa12.15□□□□□ -0.46
UBR4-211ENST00000467272 CAMK4Q16566 473 aa12.15□□□□□ -0.46
UBR4-211ENST00000467272 PYCR3Q53H96 274 aa12.15□□□□□ -0.46
UBR4-211ENST00000467272 SLC30A9Q6PML9 568 aa12.15□□□□□ -0.46
UBR4-211ENST00000467272 NLRP8Q86W28 1048 aa12.15□□□□□ -0.46
UBR4-211ENST00000467272 TP53INP2Q8IXH6 220 aa12.15□□□□□ -0.46
UBR4-211ENST00000467272 APOBEC4Q8WW27 367 aaKnown RBP12.15□□□□□ -0.46
UBR4-211ENST00000467272 EIF3CQ99613 913 aaKnown RBP12.15□□□□□ -0.46
UBR4-211ENST00000467272 ZPBPQ9BS86 351 aa12.15□□□□□ -0.46
UBR4-211ENST00000467272 SIDT1Q9NXL6 827 aaKnown RBP12.15□□□□□ -0.46
UBR4-211ENST00000467272 KCNMB2Q9Y691 235 aa12.15□□□□□ -0.46
UBR4-211ENST00000467272 CREBBPQ92793 2442 aa12.15□□□□□ -0.47
UBR4-211ENST00000467272 BLACEA4D250 179 aa12.14□□□□□ -0.47
UBR4-211ENST00000467272 ARHGAP42A6NI28 874 aa12.14□□□□□ -0.47
UBR4-211ENST00000467272 PRR19A6NJB7 356 aa12.14□□□□□ -0.47
UBR4-211ENST00000467272 A8MX80 341 aa12.14□□□□□ -0.47
UBR4-211ENST00000467272 SOCS5O75159 536 aa12.14□□□□□ -0.47
UBR4-211ENST00000467272 CALB1P05937 261 aa12.14□□□□□ -0.47
UBR4-211ENST00000467272 F8A1P23610 371 aa12.14□□□□□ -0.47
UBR4-211ENST00000467272 VIPR1P32241 457 aa12.14□□□□□ -0.47
UBR4-211ENST00000467272 STAT5AP42229 794 aa12.14□□□□□ -0.47
UBR4-211ENST00000467272 NSFP46459 744 aaKnown RBP12.14□□□□□ -0.47
UBR4-211ENST00000467272 SLC10A7Q0GE19 358 aa12.14□□□□□ -0.47
UBR4-211ENST00000467272 KLRB1Q12918 225 aa12.14□□□□□ -0.47
UBR4-211ENST00000467272 PTPRRQ15256 657 aa12.14□□□□□ -0.47
UBR4-211ENST00000467272 DPCR1Q3MIW9 517 aa12.14□□□□□ -0.47
UBR4-211ENST00000467272 TCP11X2Q5H9J9 407 aa12.14□□□□□ -0.47
UBR4-211ENST00000467272 CFAP58Q5T655 872 aa12.14□□□□□ -0.47
UBR4-211ENST00000467272 ATP1A1-AS1Q5TC04 95 aa12.14□□□□□ -0.47
UBR4-211ENST00000467272 ADAMTSL4Q6UY14 1074 aa12.14□□□□□ -0.47
UBR4-211ENST00000467272 Q6ZVL8 140 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms