RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 LOC100509620A0A075B734 347 aa4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 RPS10-NUDT3A0A1W2PQS6 291 aa4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 OR2A25A4D2G3 310 aa4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 KDM4EB2RXH2 506 aaPredicted RBP4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 SOCS2O14508 198 aa4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 PPEF2O14830 753 aa4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 P4HA2O15460 535 aa4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 VNN2O95498 520 aa4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 ADRB2P07550 413 aa4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 SELLP14151 372 aa4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 PON1P27169 355 aa4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 SLC15A1P46059 708 aa4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 LMAN1P49257 510 aa4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 CLCN3P51790 818 aa4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 MFAP4P55083 255 aa4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 RRP1P56182 461 aaKnown RBP4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 TAS2R40P59535 323 aa4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 PCLAFQ15004 111 aa4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 C15orf59Q2T9L4 293 aaPredicted RBP4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 ZNF284Q2VY69 593 aa4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 RARS2Q5T160 578 aaKnown RBP4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 GARNL3Q5VVW2 1013 aa4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 ANKRD54Q6NXT1 300 aa4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 CTU1Q7Z7A3 348 aaKnown RBP4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 CCDC13Q8IYE1 715 aa4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 TMEM199Q8N511 208 aa4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 ZNF548Q8NEK5 533 aaPredicted RBP4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 URB1-AS1Q96HZ7 61 aa4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 ACOX2Q99424 681 aa4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 PCGF1Q9BSM1 259 aa4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 MRPL1Q9BYD6 325 aaKnown RBP4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 ESRP2Q9H6T0 727 aaKnown RBP4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 WDR26Q9H7D7 661 aa4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 CLK4Q9HAZ1 481 aaKnown RBP4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 PLAC1Q9HBJ0 212 aa4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 PDE7BQ9NP56 450 aa4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 SETD4Q9NVD3 440 aa4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 OR6C3Q9NZP0 311 aa4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 MRPL15Q9P015 296 aaKnown RBP4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 CHORDC1Q9UHD1 332 aaPredicted RBP4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 FBXW11Q9UKB1 542 aa4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 RCOR1Q9UKL0 485 aa4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 CMAHPQ9Y471 501 aa4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 ARHGEF40Q8TER5 1519 aa4.44□□□□□ -1.7
CDC42BPA-211ENST00000466538 I6L893 689 aaPredicted RBP4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 SH2B2O14492 632 aaPredicted RBP4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 CTDSP2O14595 271 aa4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 MITFO75030 526 aaPredicted RBP4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 ENTPD3O75355 529 aa4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 MOSPD3O75425 235 aa4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 TPPPO94811 219 aa4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 FTCDO95954 541 aa4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 ACADLP28330 430 aa4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 THPOP40225 353 aa4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 ABCG1P45844 678 aa4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 RFX2P48378 723 aa4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 HSD17B4P51659 736 aa4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 ROR2Q01974 943 aaKnown RBP4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 MYBPC2Q14324 1141 aa4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 RABEP1Q15276 862 aa4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 PRTGQ2VWP7 1150 aa4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 PPP6R3Q5H9R7 873 aaPredicted RBP4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 FSCBQ5H9T9 825 aa4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 Q6ZSV7 163 aa4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 DPPA4Q7L190 304 aa4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 SHFQ7M4L6 423 aa4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 AADATQ8N5Z0 425 aa4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 SYT2Q8N9I0 419 aaPredicted RBP4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 HJURPQ8NCD3 748 aaPredicted RBP4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 ARRDC2Q8TBH0 407 aa4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 TRPC4APQ8TEL6 797 aa4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 PRPF31Q8WWY3 499 aaKnown RBP4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 ERGIC1Q969X5 290 aa4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 SLC22A18Q96BI1 424 aa4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 ELMOD3Q96FG2 381 aa4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 TXLNGYQ9BZA5 131 aa4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 FOXP1Q9H334 677 aaPredicted RBP4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 SLC35C2Q9NQQ7 365 aa4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 ZBTB40Q9NUA8 1239 aa4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 PSD3Q9NYI0 1048 aa4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 MARCH4Q9P2E8 410 aaPredicted RBP4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 TTC7AQ9ULT0 858 aaPredicted RBP4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 R3HDM2Q9Y2K5 976 aaKnown RBP4.43□□□□□ -1.7
CDC42BPA-211ENST00000466538 C1orf226A1L170 272 aa4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 LRRC72A6NJI9 287 aa4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 GLOD5A6NK44 160 aa4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 H0YGN5 161 aa4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 OGG1O15527 345 aa4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 HSPA12AO43301 675 aa4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 SPRY3O43610 288 aa4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 LCATP04180 440 aa4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 TNFRSF1BP20333 461 aa4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 UBA1P22314 1058 aaKnown RBP4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 HOXD3P31249 432 aaPredicted RBP4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 HNRNPH1P31943 449 aaKnown RBP4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 NRIP1P48552 1158 aa4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 NUDT6P53370 316 aa4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 PNLIPRP2P54317 469 aa4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 BAATQ14032 418 aaPredicted RBP4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 CTTNQ14247 550 aaKnown RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms