RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 PCDH20Q8N6Y1 951 aaKnown RBP18.64■□□□□ 0.58
CAPN3-209ENST00000466222 GSDMBQ8TAX9 411 aa18.64■□□□□ 0.58
CAPN3-209ENST00000466222 CSGALNACT1Q8TDX6 532 aa18.64■□□□□ 0.58
CAPN3-209ENST00000466222 ZNF669Q96BR6 464 aaPredicted RBP18.64■□□□□ 0.58
CAPN3-209ENST00000466222 CEP44Q9C0F1 390 aa18.64■□□□□ 0.58
CAPN3-209ENST00000466222 MMADHCQ9H3L0 296 aaPredicted RBP18.64■□□□□ 0.58
CAPN3-209ENST00000466222 UGT1A7Q9HAW7 530 aa18.64■□□□□ 0.58
CAPN3-209ENST00000466222 UGT1A10Q9HAW8 530 aa18.64■□□□□ 0.58
CAPN3-209ENST00000466222 UGT1A8Q9HAW9 530 aa18.64■□□□□ 0.58
CAPN3-209ENST00000466222 KCNK13Q9HB14 408 aa18.64■□□□□ 0.58
CAPN3-209ENST00000466222 KCNK4Q9NYG8 393 aa18.64■□□□□ 0.58
CAPN3-209ENST00000466222 PLLPQ9Y342 182 aa18.64■□□□□ 0.58
CAPN3-209ENST00000466222 ALPIP09923 528 aa18.64■□□□□ 0.57
CAPN3-209ENST00000466222 ERVK-10P10266 1014 aa18.64■□□□□ 0.57
CAPN3-209ENST00000466222 BGNP21810 368 aa18.64■□□□□ 0.57
CAPN3-209ENST00000466222 ABL2P42684 1182 aa18.64■□□□□ 0.57
CAPN3-209ENST00000466222 ZBTB16Q05516 673 aa18.64■□□□□ 0.57
CAPN3-209ENST00000466222 ZNF234Q14588 700 aa18.64■□□□□ 0.57
CAPN3-209ENST00000466222 EGFLAMQ63HQ2 1017 aa18.64■□□□□ 0.57
CAPN3-209ENST00000466222 PKN3Q6P5Z2 889 aa18.64■□□□□ 0.57
CAPN3-209ENST00000466222 METTL3Q86U44 580 aaKnown RBP18.64■□□□□ 0.57
CAPN3-209ENST00000466222 PNPLA1Q8N8W4 532 aa18.64■□□□□ 0.57
CAPN3-209ENST00000466222 KIFC1Q9BW19 673 aa18.64■□□□□ 0.57
CAPN3-209ENST00000466222 DCLRE1BQ9H816 532 aa18.64■□□□□ 0.57
CAPN3-209ENST00000466222 SOX13Q9UN79 622 aa18.64■□□□□ 0.57
CAPN3-209ENST00000466222 TCAF1Q9Y4C2 921 aa18.64■□□□□ 0.57
CAPN3-209ENST00000466222 MUC3AQ02505 3323 aa18.64■□□□□ 0.57
CAPN3-209ENST00000466222 COL4A3Q01955 1670 aa18.63■□□□□ 0.57
CAPN3-209ENST00000466222 CXorf51AA0A1B0GTR3 108 aa18.63■□□□□ 0.57
CAPN3-209ENST00000466222 FAM159BA6NKW6 160 aa18.63■□□□□ 0.57
CAPN3-209ENST00000466222 A8MX80 341 aa18.63■□□□□ 0.57
CAPN3-209ENST00000466222 ANKRD66B4E2M5 251 aa18.63■□□□□ 0.57
CAPN3-209ENST00000466222 SLC4A1P02730 911 aa18.63■□□□□ 0.57
CAPN3-209ENST00000466222 POLBP06746 335 aa18.63■□□□□ 0.57
CAPN3-209ENST00000466222 CTSLP07711 333 aa18.63■□□□□ 0.57
CAPN3-209ENST00000466222 TPBGLP0DKB5 382 aa18.63■□□□□ 0.57
CAPN3-209ENST00000466222 HLA-DPA1P20036 260 aa18.63■□□□□ 0.57
CAPN3-209ENST00000466222 NNMTP40261 264 aa18.63■□□□□ 0.57
CAPN3-209ENST00000466222 WASP42768 502 aa18.63■□□□□ 0.57
CAPN3-209ENST00000466222 CSNK1DP48730 415 aa18.63■□□□□ 0.57
CAPN3-209ENST00000466222 LEXMQ3ZCV2 418 aa18.63■□□□□ 0.57
CAPN3-209ENST00000466222 FNDC3BQ53EP0 1204 aaKnown RBP18.63■□□□□ 0.57
CAPN3-209ENST00000466222 LRRC73Q5JTD7 316 aa18.63■□□□□ 0.57
CAPN3-209ENST00000466222 STEAP4Q687X5 459 aa18.63■□□□□ 0.57
CAPN3-209ENST00000466222 TIFABQ6ZNK6 161 aa18.63■□□□□ 0.57
CAPN3-209ENST00000466222 PLCD3Q8N3E9 789 aa18.63■□□□□ 0.57
CAPN3-209ENST00000466222 MDGA1Q8NFP4 955 aa18.63■□□□□ 0.57
CAPN3-209ENST00000466222 CACNA2D2Q9NY47 1150 aa18.63■□□□□ 0.57
CAPN3-209ENST00000466222 MOCS1Q9NZB8 636 aa18.63■□□□□ 0.57
CAPN3-209ENST00000466222 A0A0C4DFX4 3053 aa18.63■□□□□ 0.57
CAPN3-209ENST00000466222 BIRC5O15392 142 aa18.62■□□□□ 0.57
CAPN3-209ENST00000466222 KIF1CO43896 1103 aaKnown RBP18.62■□□□□ 0.57
CAPN3-209ENST00000466222 PGLSO95336 258 aa18.62■□□□□ 0.57
CAPN3-209ENST00000466222 GSRP00390 522 aa18.62■□□□□ 0.57
CAPN3-209ENST00000466222 ASLP04424 464 aa18.62■□□□□ 0.57
CAPN3-209ENST00000466222 FGF1P05230 155 aa18.62■□□□□ 0.57
CAPN3-209ENST00000466222 UGT2B4P06133 528 aa18.62■□□□□ 0.57
CAPN3-209ENST00000466222 SRPRAP08240 638 aaKnown RBP18.62■□□□□ 0.57
CAPN3-209ENST00000466222 GRIA2P42262 883 aa18.62■□□□□ 0.57
CAPN3-209ENST00000466222 IL12RB1P42701 662 aa18.62■□□□□ 0.57
CAPN3-209ENST00000466222 SEC13P55735 322 aa18.62■□□□□ 0.57
CAPN3-209ENST00000466222 ST8SIA6P61647 398 aa18.62■□□□□ 0.57
CAPN3-209ENST00000466222 SLC14A2Q15849 920 aa18.62■□□□□ 0.57
CAPN3-209ENST00000466222 CNGA3Q16281 694 aa18.62■□□□□ 0.57
CAPN3-209ENST00000466222 ARHGAP24Q8N264 748 aa18.62■□□□□ 0.57
CAPN3-209ENST00000466222 PIH1D2Q8WWB5 315 aa18.62■□□□□ 0.57
CAPN3-209ENST00000466222 ZNF570Q96NI8 536 aa18.62■□□□□ 0.57
CAPN3-209ENST00000466222 C12orf65Q9H3J6 166 aaKnown RBP18.62■□□□□ 0.57
CAPN3-209ENST00000466222 ATP13A3Q9H7F0 1226 aa18.62■□□□□ 0.57
CAPN3-209ENST00000466222 SIRPGQ9P1W8 387 aa18.62■□□□□ 0.57
CAPN3-209ENST00000466222 ARIH1Q9Y4X5 557 aaPredicted RBP18.62■□□□□ 0.57
CAPN3-209ENST00000466222 FAM237BA0A1B0GVD1 139 aa18.62■□□□□ 0.57
CAPN3-209ENST00000466222 SPECC1L-ADORA2AF8WAN1 911 aa18.62■□□□□ 0.57
CAPN3-209ENST00000466222 K7EQS6 105 aa18.62■□□□□ 0.57
CAPN3-209ENST00000466222 HTRA2O43464 458 aaPredicted RBP18.62■□□□□ 0.57
CAPN3-209ENST00000466222 LDB2O43679 373 aa18.62■□□□□ 0.57
CAPN3-209ENST00000466222 LEFTY1O75610 366 aa18.62■□□□□ 0.57
CAPN3-209ENST00000466222 SERPINB3P29508 390 aa18.62■□□□□ 0.57
CAPN3-209ENST00000466222 CTHP32929 405 aa18.62■□□□□ 0.57
CAPN3-209ENST00000466222 EIF2DP41214 584 aaKnown RBP18.62■□□□□ 0.57
CAPN3-209ENST00000466222 METAP1P53582 386 aa18.62■□□□□ 0.57
CAPN3-209ENST00000466222 ARSIQ5FYB1 569 aa18.62■□□□□ 0.57
CAPN3-209ENST00000466222 ARMC12Q5T9G4 340 aa18.62■□□□□ 0.57
CAPN3-209ENST00000466222 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.62■□□□□ 0.57
CAPN3-209ENST00000466222 TEX9Q8N6V9 391 aa18.62■□□□□ 0.57
CAPN3-209ENST00000466222 PPHLN1Q8NEY8 458 aaKnown RBP18.62■□□□□ 0.57
CAPN3-209ENST00000466222 P2RY13Q9BPV8 354 aa18.62■□□□□ 0.57
CAPN3-209ENST00000466222 LRRC42Q9Y546 428 aa18.62■□□□□ 0.57
CAPN3-209ENST00000466222 WASF2Q9Y6W5 498 aa18.62■□□□□ 0.57
CAPN3-209ENST00000466222 PIAS3Q9Y6X2 628 aa18.62■□□□□ 0.57
CAPN3-209ENST00000466222 MAGEB16A2A368 324 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 AP3B1O00203 1094 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 RFPL1O75677 317 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 USP1O94782 785 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 POP4O95707 220 aaKnown RBP18.61■□□□□ 0.57
CAPN3-209ENST00000466222 CD72P21854 359 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 ARNTP27540 789 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 CRHR1P34998 444 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 TMPRSS15P98073 1019 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 NAB1Q13506 487 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms