RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 UBXN10Q96LJ8 280 aa18.25■□□□□ 0.51
COL9A3-205ENST00000466192 DRC3Q9H069 523 aa18.25■□□□□ 0.51
COL9A3-205ENST00000466192 ILKAPQ9H0C8 392 aaPredicted RBP18.25■□□□□ 0.51
COL9A3-205ENST00000466192 FAM96AQ9H5X1 160 aa18.25■□□□□ 0.51
COL9A3-205ENST00000466192 ABCB8Q9NUT2 735 aa18.25■□□□□ 0.51
COL9A3-205ENST00000466192 TDP1Q9NUW8 608 aa18.25■□□□□ 0.51
COL9A3-205ENST00000466192 POLR3BQ9NW08 1133 aaPredicted RBP18.25■□□□□ 0.51
COL9A3-205ENST00000466192 EVLQ9UI08 416 aaPredicted RBP18.25■□□□□ 0.51
COL9A3-205ENST00000466192 ATG2AQ2TAZ0 1938 aa18.25■□□□□ 0.51
COL9A3-205ENST00000466192 PER2O15055 1255 aa18.25■□□□□ 0.51
COL9A3-205ENST00000466192 ZNF821O75541 412 aaPredicted RBP18.25■□□□□ 0.51
COL9A3-205ENST00000466192 PRAMEF12O95522 483 aa18.25■□□□□ 0.51
COL9A3-205ENST00000466192 CCDC166P0CW27 439 aa18.25■□□□□ 0.51
COL9A3-205ENST00000466192 MPSTP25325 297 aa18.25■□□□□ 0.51
COL9A3-205ENST00000466192 HLA-FP30511 346 aa18.25■□□□□ 0.51
COL9A3-205ENST00000466192 HOXA9P31269 272 aa18.25■□□□□ 0.51
COL9A3-205ENST00000466192 PLK1P53350 603 aa18.25■□□□□ 0.51
COL9A3-205ENST00000466192 TIAL1Q01085 375 aaKnown RBP eCLIP18.25■□□□□ 0.51
COL9A3-205ENST00000466192 FAM83EQ2M2I3 478 aa18.25■□□□□ 0.51
COL9A3-205ENST00000466192 ARHGAP15Q53QZ3 475 aa18.25■□□□□ 0.51
COL9A3-205ENST00000466192 ARL13AQ5H913 290 aaPredicted RBP18.25■□□□□ 0.51
COL9A3-205ENST00000466192 FAM109BQ6ICB4 259 aaPredicted RBP18.25■□□□□ 0.51
COL9A3-205ENST00000466192 FAM45BPQ6NSW5 357 aa18.25■□□□□ 0.51
COL9A3-205ENST00000466192 SDCCAG8Q86SQ7 713 aaPredicted RBP18.25■□□□□ 0.51
COL9A3-205ENST00000466192 PIM3Q86V86 326 aa18.25■□□□□ 0.51
COL9A3-205ENST00000466192 TTC30BQ8N4P2 665 aa18.25■□□□□ 0.51
COL9A3-205ENST00000466192 FAM45AQ8TCE6 357 aa18.25■□□□□ 0.51
COL9A3-205ENST00000466192 MRPL57Q9BQC6 102 aaKnown RBP18.25■□□□□ 0.51
COL9A3-205ENST00000466192 SHCBP1LQ9BZQ2 653 aa18.25■□□□□ 0.51
COL9A3-205ENST00000466192 HCFC2Q9Y5Z7 792 aa18.25■□□□□ 0.51
COL9A3-205ENST00000466192 SCN8AQ9UQD0 1980 aa18.25■□□□□ 0.51
COL9A3-205ENST00000466192 B2RBV5 119 aa18.24■□□□□ 0.51
COL9A3-205ENST00000466192 GSC2O15499 205 aa18.24■□□□□ 0.51
COL9A3-205ENST00000466192 KIF1CO43896 1103 aaKnown RBP18.24■□□□□ 0.51
COL9A3-205ENST00000466192 GKP32189 559 aa18.24■□□□□ 0.51
COL9A3-205ENST00000466192 CTSOP43234 321 aaPredicted RBP18.24■□□□□ 0.51
COL9A3-205ENST00000466192 PRSS36Q5K4E3 855 aa18.24■□□□□ 0.51
COL9A3-205ENST00000466192 AFTPHQ6ULP2 937 aa18.24■□□□□ 0.51
COL9A3-205ENST00000466192 RPL10LQ96L21 214 aaKnown RBP18.24■□□□□ 0.51
COL9A3-205ENST00000466192 MTIF3Q9H2K0 278 aaKnown RBP18.24■□□□□ 0.51
COL9A3-205ENST00000466192 BPIFA1Q9NP55 256 aa18.24■□□□□ 0.51
COL9A3-205ENST00000466192 FKBPLQ9UIM3 349 aa18.24■□□□□ 0.51
COL9A3-205ENST00000466192 PGLSO95336 258 aa18.24■□□□□ 0.51
COL9A3-205ENST00000466192 PIGNO95427 931 aa18.24■□□□□ 0.51
COL9A3-205ENST00000466192 LTA4HP09960 611 aaKnown RBP18.24■□□□□ 0.51
COL9A3-205ENST00000466192 FDXRP22570 491 aa18.24■□□□□ 0.51
COL9A3-205ENST00000466192 PMLP29590 882 aa18.24■□□□□ 0.51
COL9A3-205ENST00000466192 CDKN1CP49918 316 aaPredicted RBP18.24■□□□□ 0.51
COL9A3-205ENST00000466192 TECRLQ5HYJ1 363 aa18.24■□□□□ 0.51
COL9A3-205ENST00000466192 PITRM1Q5JRX3 1037 aa18.24■□□□□ 0.51
COL9A3-205ENST00000466192 DGKKQ5KSL6 1271 aa18.24■□□□□ 0.51
COL9A3-205ENST00000466192 ASTLQ6HA08 431 aaPredicted RBP18.24■□□□□ 0.51
COL9A3-205ENST00000466192 GRASPQ7Z6J2 395 aaPredicted RBP18.24■□□□□ 0.51
COL9A3-205ENST00000466192 TEX9Q8N6V9 391 aa18.24■□□□□ 0.51
COL9A3-205ENST00000466192 FBXO27Q8NI29 283 aa18.24■□□□□ 0.51
COL9A3-205ENST00000466192 MAPK15Q8TD08 544 aa18.24■□□□□ 0.51
COL9A3-205ENST00000466192 PIH1D2Q8WWB5 315 aa18.24■□□□□ 0.51
COL9A3-205ENST00000466192 MCUR1Q96AQ8 359 aa18.24■□□□□ 0.51
COL9A3-205ENST00000466192 MYO19Q96H55 970 aa18.24■□□□□ 0.51
COL9A3-205ENST00000466192 ZSWIM3Q96MP5 696 aa18.24■□□□□ 0.51
COL9A3-205ENST00000466192 TNKS2Q9H2K2 1166 aa18.24■□□□□ 0.51
COL9A3-205ENST00000466192 TAGLN3Q9UI15 199 aa18.24■□□□□ 0.51
COL9A3-205ENST00000466192 L3MBTL1Q9Y468 752 aa18.24■□□□□ 0.51
COL9A3-205ENST00000466192 NEMP2A6NFY4 417 aa18.23■□□□□ 0.51
COL9A3-205ENST00000466192 HNRNPA1P09651 372 aaKnown RBP eCLIP18.23■□□□□ 0.51
COL9A3-205ENST00000466192 CTPS1P17812 591 aa18.23■□□□□ 0.51
COL9A3-205ENST00000466192 STK19P49842 368 aaPredicted RBP18.23■□□□□ 0.51
COL9A3-205ENST00000466192 KPNA2P52292 529 aaKnown RBP18.23■□□□□ 0.51
COL9A3-205ENST00000466192 PRKAA2P54646 552 aa18.23■□□□□ 0.51
COL9A3-205ENST00000466192 EPHB1P54762 984 aa18.23■□□□□ 0.51
COL9A3-205ENST00000466192 E2F5Q15329 346 aa18.23■□□□□ 0.51
COL9A3-205ENST00000466192 TBCCQ15814 346 aa18.23■□□□□ 0.51
COL9A3-205ENST00000466192 SLC9B1Q4ZJI4 515 aa18.23■□□□□ 0.51
COL9A3-205ENST00000466192 ARMC12Q5T9G4 340 aa18.23■□□□□ 0.51
COL9A3-205ENST00000466192 AGAP9Q5VTM2 703 aa18.23■□□□□ 0.51
COL9A3-205ENST00000466192 EPGNQ6UW88 154 aa18.23■□□□□ 0.51
COL9A3-205ENST00000466192 CCNYL1Q8N7R7 359 aa18.23■□□□□ 0.51
COL9A3-205ENST00000466192 TXNDC5Q8NBS9 432 aaKnown RBP18.23■□□□□ 0.51
COL9A3-205ENST00000466192 SCG3Q8WXD2 468 aaKnown RBP18.23■□□□□ 0.51
COL9A3-205ENST00000466192 PPP1R36Q96LQ0 422 aa18.23■□□□□ 0.51
COL9A3-205ENST00000466192 LINC00597Q9H2U6 94 aa18.23■□□□□ 0.51
COL9A3-205ENST00000466192 INTS10Q9NVR2 710 aaKnown RBP18.23■□□□□ 0.51
COL9A3-205ENST00000466192 CORO1CQ9ULV4 474 aaPredicted RBP18.23■□□□□ 0.51
COL9A3-205ENST00000466192 SORCS3Q9UPU3 1222 aa18.23■□□□□ 0.51
COL9A3-205ENST00000466192 RAP2CQ9Y3L5 183 aa18.23■□□□□ 0.51
COL9A3-205ENST00000466192 C5orf42Q9H799 3197 aa18.23■□□□□ 0.51
COL9A3-205ENST00000466192 PENKP01210 267 aaPredicted RBP18.23■□□□□ 0.51
COL9A3-205ENST00000466192 RB1P06400 928 aa18.23■□□□□ 0.51
COL9A3-205ENST00000466192 CA3P07451 260 aa18.23■□□□□ 0.51
COL9A3-205ENST00000466192 ALPIP09923 528 aa18.23■□□□□ 0.51
COL9A3-205ENST00000466192 NCF2P19878 526 aaPredicted RBP18.23■□□□□ 0.51
COL9A3-205ENST00000466192 FUT11Q495W5 492 aa18.23■□□□□ 0.51
COL9A3-205ENST00000466192 MAGEC3Q8TD91 643 aa18.23■□□□□ 0.51
COL9A3-205ENST00000466192 EID2BQ96D98 161 aa18.23■□□□□ 0.51
COL9A3-205ENST00000466192 POMKQ9H5K3 350 aa18.23■□□□□ 0.51
COL9A3-205ENST00000466192 HACD3Q9P035 362 aa18.23■□□□□ 0.51
COL9A3-205ENST00000466192 ZNF711Q9Y462 761 aa18.23■□□□□ 0.51
COL9A3-205ENST00000466192 NEDD8-MDP1E9PL57 170 aa18.22■□□□□ 0.51
COL9A3-205ENST00000466192 STX7O15400 261 aaKnown RBP18.22■□□□□ 0.51
COL9A3-205ENST00000466192 XYLBO75191 536 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms