RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 FAM237BA0A1B0GVD1 139 aa4.34□□□□□ -1.71
LRCH3-211ENST00000466054 DYTNA2CJ06 578 aa4.34□□□□□ -1.71
LRCH3-211ENST00000466054 CLEC18AA5D8T8 446 aa4.34□□□□□ -1.71
LRCH3-211ENST00000466054 J3KR12 359 aa4.34□□□□□ -1.71
LRCH3-211ENST00000466054 SNAP23O00161 211 aa4.34□□□□□ -1.71
LRCH3-211ENST00000466054 HSPA12AO43301 675 aa4.34□□□□□ -1.71
LRCH3-211ENST00000466054 SERPINI2O75830 405 aa4.34□□□□□ -1.71
LRCH3-211ENST00000466054 MAOAP21397 527 aa4.34□□□□□ -1.71
LRCH3-211ENST00000466054 C21orf33P30042 268 aaPredicted RBP4.34□□□□□ -1.71
LRCH3-211ENST00000466054 HNRNPH1P31943 449 aaKnown RBP4.34□□□□□ -1.71
LRCH3-211ENST00000466054 PIGAP37287 484 aa4.34□□□□□ -1.71
LRCH3-211ENST00000466054 METAP2P50579 478 aaKnown RBP eCLIP4.34□□□□□ -1.71
LRCH3-211ENST00000466054 PRAMEP78395 509 aa4.34□□□□□ -1.71
LRCH3-211ENST00000466054 SORDQ00796 357 aa4.34□□□□□ -1.71
LRCH3-211ENST00000466054 COL28A1Q2UY09 1125 aa4.34□□□□□ -1.71
LRCH3-211ENST00000466054 CXorf66Q5JRM2 361 aaPredicted RBP4.34□□□□□ -1.71
LRCH3-211ENST00000466054 GPATCH4Q5T3I0 446 aaKnown RBP4.34□□□□□ -1.71
LRCH3-211ENST00000466054 TYW3Q6IPR3 259 aaKnown RBP4.34□□□□□ -1.71
LRCH3-211ENST00000466054 METTL2BQ6P1Q9 378 aaKnown RBP4.34□□□□□ -1.71
LRCH3-211ENST00000466054 FBXO46Q6PJ61 603 aaPredicted RBP4.34□□□□□ -1.71
LRCH3-211ENST00000466054 QSOX2Q6ZRP7 698 aa4.34□□□□□ -1.71
LRCH3-211ENST00000466054 CLEC18CQ8NCF0 446 aa4.34□□□□□ -1.71
LRCH3-211ENST00000466054 CREB3L4Q8TEY5 395 aa4.34□□□□□ -1.71
LRCH3-211ENST00000466054 ADAMTS14Q8WXS8 1223 aa4.34□□□□□ -1.71
LRCH3-211ENST00000466054 USP6NLQ92738 828 aa4.34□□□□□ -1.71
LRCH3-211ENST00000466054 MIB2Q96AX9 1013 aa4.34□□□□□ -1.71
LRCH3-211ENST00000466054 PHF21BQ96EK2 531 aa4.34□□□□□ -1.71
LRCH3-211ENST00000466054 METTL2AQ96IZ6 378 aaKnown RBP4.34□□□□□ -1.71
LRCH3-211ENST00000466054 TXNDC15Q96J42 360 aa4.34□□□□□ -1.71
LRCH3-211ENST00000466054 HARBI1Q96MB7 349 aa4.34□□□□□ -1.71
LRCH3-211ENST00000466054 ESRP2Q9H6T0 727 aaKnown RBP4.34□□□□□ -1.71
LRCH3-211ENST00000466054 PLEKHA5Q9HAU0 1116 aa4.34□□□□□ -1.71
LRCH3-211ENST00000466054 HCFC1R1Q9NWW0 138 aa4.34□□□□□ -1.71
LRCH3-211ENST00000466054 ADAM18Q9Y3Q7 739 aa4.34□□□□□ -1.71
LRCH3-211ENST00000466054 TCF20Q9UGU0 1960 aaKnown RBP4.33□□□□□ -1.72
LRCH3-211ENST00000466054 ATXN2Q99700 1313 aaKnown RBP4.33□□□□□ -1.72
LRCH3-211ENST00000466054 ANKRD18BA2A2Z9 1011 aa4.33□□□□□ -1.72
LRCH3-211ENST00000466054 HMGB1P1B2RPK0 211 aaPredicted RBP4.33□□□□□ -1.72
LRCH3-211ENST00000466054 AKR1B15C9JRZ8 316 aaPredicted RBP4.33□□□□□ -1.72
LRCH3-211ENST00000466054 SCAMP1O15126 338 aa4.33□□□□□ -1.72
LRCH3-211ENST00000466054 SOCS5O75159 536 aa4.33□□□□□ -1.72
LRCH3-211ENST00000466054 TIPRLO75663 272 aa4.33□□□□□ -1.72
LRCH3-211ENST00000466054 SLC25A12O75746 678 aa4.33□□□□□ -1.72
LRCH3-211ENST00000466054 GAGE7O76087 117 aa4.33□□□□□ -1.72
LRCH3-211ENST00000466054 CH25HO95992 272 aa4.33□□□□□ -1.72
LRCH3-211ENST00000466054 PRSS2P07478 247 aa4.33□□□□□ -1.72
LRCH3-211ENST00000466054 GAGE12FP0CL80 117 aa4.33□□□□□ -1.72
LRCH3-211ENST00000466054 GAGE12GP0CL81 117 aa4.33□□□□□ -1.72
LRCH3-211ENST00000466054 GAGE12IP0CL82 117 aa4.33□□□□□ -1.72
LRCH3-211ENST00000466054 PCYT1AP49585 367 aa4.33□□□□□ -1.72
LRCH3-211ENST00000466054 ZBED6P86452 979 aa4.33□□□□□ -1.72
LRCH3-211ENST00000466054 LMOD3Q0VAK6 560 aa4.33□□□□□ -1.72
LRCH3-211ENST00000466054 GAGE1Q13065 139 aa4.33□□□□□ -1.72
LRCH3-211ENST00000466054 GAGE4Q13068 117 aa4.33□□□□□ -1.72
LRCH3-211ENST00000466054 KEAP1Q14145 624 aa4.33□□□□□ -1.72
LRCH3-211ENST00000466054 C2orf68Q2NKX9 166 aa4.33□□□□□ -1.72
LRCH3-211ENST00000466054 MMEL1Q495T6 779 aa4.33□□□□□ -1.72
LRCH3-211ENST00000466054 SOWAHCQ53LP3 525 aaPredicted RBP4.33□□□□□ -1.72
LRCH3-211ENST00000466054 SLC45A4Q5BKX6 768 aa4.33□□□□□ -1.72
LRCH3-211ENST00000466054 GGNBP1Q5YKI7 109 aa4.33□□□□□ -1.72
LRCH3-211ENST00000466054 TTI2Q6NXR4 508 aa4.33□□□□□ -1.72
LRCH3-211ENST00000466054 ANKRD54Q6NXT1 300 aa4.33□□□□□ -1.72
LRCH3-211ENST00000466054 TMEM154Q6P9G4 183 aa4.33□□□□□ -1.72
LRCH3-211ENST00000466054 ZC3HC1Q86WB0 502 aaKnown RBP4.33□□□□□ -1.72
LRCH3-211ENST00000466054 NEXN-AS1Q8NBZ9 246 aa4.33□□□□□ -1.72
LRCH3-211ENST00000466054 ELP5Q8TE02 316 aa4.33□□□□□ -1.72
LRCH3-211ENST00000466054 SCFD2Q8WU76 684 aa4.33□□□□□ -1.72
LRCH3-211ENST00000466054 ARHGEF26Q96DR7 871 aa4.33□□□□□ -1.72
LRCH3-211ENST00000466054 HINT3Q9NQE9 182 aaKnown RBP4.33□□□□□ -1.72
LRCH3-211ENST00000466054 EIF2B3Q9NR50 452 aaKnown RBP4.33□□□□□ -1.72
LRCH3-211ENST00000466054 RCOR1Q9UKL0 485 aa4.33□□□□□ -1.72
LRCH3-211ENST00000466054 CDC14AQ9UNH5 594 aa4.33□□□□□ -1.72
LRCH3-211ENST00000466054 MTMR6Q9Y217 621 aa4.33□□□□□ -1.72
LRCH3-211ENST00000466054 CPED1A4D0V7 1026 aa4.32□□□□□ -1.72
LRCH3-211ENST00000466054 HCRTR2O43614 444 aa4.32□□□□□ -1.72
LRCH3-211ENST00000466054 ZIC3O60481 467 aa4.32□□□□□ -1.72
LRCH3-211ENST00000466054 HNRNPCL1O60812 293 aaKnown RBP4.32□□□□□ -1.72
LRCH3-211ENST00000466054 KCNJ13O60928 360 aa4.32□□□□□ -1.72
LRCH3-211ENST00000466054 PTP4A3O75365 173 aa4.32□□□□□ -1.72
LRCH3-211ENST00000466054 NDUFS3O75489 264 aa4.32□□□□□ -1.72
LRCH3-211ENST00000466054 MLYCDO95822 493 aa4.32□□□□□ -1.72
LRCH3-211ENST00000466054 TM4SF1P30408 202 aa4.32□□□□□ -1.72
LRCH3-211ENST00000466054 STX2P32856 288 aa4.32□□□□□ -1.72
LRCH3-211ENST00000466054 COMPP49747 757 aaPredicted RBP4.32□□□□□ -1.72
LRCH3-211ENST00000466054 F2RL1P55085 397 aa4.32□□□□□ -1.72
LRCH3-211ENST00000466054 CEBPZQ03701 1054 aaKnown RBP4.32□□□□□ -1.72
LRCH3-211ENST00000466054 CRYMQ14894 314 aa4.32□□□□□ -1.72
LRCH3-211ENST00000466054 MED22Q15528 200 aa4.32□□□□□ -1.72
LRCH3-211ENST00000466054 ADIPOQQ15848 244 aa4.32□□□□□ -1.72
LRCH3-211ENST00000466054 HLFQ16534 295 aa4.32□□□□□ -1.72
LRCH3-211ENST00000466054 IKBIPQ70UQ0 350 aa4.32□□□□□ -1.72
LRCH3-211ENST00000466054 FJX1Q86VR8 437 aa4.32□□□□□ -1.72
LRCH3-211ENST00000466054 RPAP2Q8IXW5 612 aaPredicted RBP4.32□□□□□ -1.72
LRCH3-211ENST00000466054 HACE1Q8IYU2 909 aa4.32□□□□□ -1.72
LRCH3-211ENST00000466054 CLIP4Q8N3C7 705 aa4.32□□□□□ -1.72
LRCH3-211ENST00000466054 SPATA6LQ8N4H0 392 aa4.32□□□□□ -1.72
LRCH3-211ENST00000466054 C1QTNF5Q9BXJ0 243 aa4.32□□□□□ -1.72
LRCH3-211ENST00000466054 SEZ6LQ9BYH1 1024 aa4.32□□□□□ -1.72
LRCH3-211ENST00000466054 NDST4Q9H3R1 872 aa4.32□□□□□ -1.72
LRCH3-211ENST00000466054 PDZD7Q9H5P4 517 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms