RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 NRSN1Q8IZ57 195 aa20.3■□□□□ 0.84
SKA3-205ENST00000465471 C17orf53Q8N3J3 647 aaPredicted RBP20.3■□□□□ 0.84
SKA3-205ENST00000465471 GLIS1Q8NBF1 620 aa20.3■□□□□ 0.84
SKA3-205ENST00000465471 SRPK1Q96SB4 655 aaKnown RBP20.3■□□□□ 0.84
SKA3-205ENST00000465471 NAP1L3Q99457 506 aaPredicted RBP20.3■□□□□ 0.84
SKA3-205ENST00000465471 FICDQ9BVA6 458 aa20.3■□□□□ 0.84
SKA3-205ENST00000465471 TM7SF3Q9NS93 570 aa20.3■□□□□ 0.84
SKA3-205ENST00000465471 RGSL1A5PLK6 1076 aa20.29■□□□□ 0.84
SKA3-205ENST00000465471 K7ESM1 405 aa20.29■□□□□ 0.84
SKA3-205ENST00000465471 YKT6O15498 198 aa20.29■□□□□ 0.84
SKA3-205ENST00000465471 SOD1P00441 154 aa20.29■□□□□ 0.84
SKA3-205ENST00000465471 AGTP01019 485 aa20.29■□□□□ 0.84
SKA3-205ENST00000465471 HOXC4P09017 264 aaPredicted RBP20.29■□□□□ 0.84
SKA3-205ENST00000465471 PIRTP0C851 137 aa20.29■□□□□ 0.84
SKA3-205ENST00000465471 EPHA8P29322 1005 aaPredicted RBP20.29■□□□□ 0.84
SKA3-205ENST00000465471 MSLNQ13421 630 aaPredicted RBP20.29■□□□□ 0.84
SKA3-205ENST00000465471 OLIG2Q13516 323 aa20.29■□□□□ 0.84
SKA3-205ENST00000465471 PRAMEF14Q5SWL7 426 aa20.29■□□□□ 0.84
SKA3-205ENST00000465471 DENND5AQ6IQ26 1287 aa20.29■□□□□ 0.84
SKA3-205ENST00000465471 PNCKQ6P2M8 343 aa20.29■□□□□ 0.84
SKA3-205ENST00000465471 MACC1Q6ZN28 852 aa20.29■□□□□ 0.84
SKA3-205ENST00000465471 PIP4P1Q86T03 277 aa20.29■□□□□ 0.84
SKA3-205ENST00000465471 NAPGQ99747 312 aaPredicted RBP20.29■□□□□ 0.84
SKA3-205ENST00000465471 APOOQ9BUR5 198 aa20.29■□□□□ 0.84
SKA3-205ENST00000465471 ABCG8Q9H221 673 aa20.29■□□□□ 0.84
SKA3-205ENST00000465471 ZFYVE1Q9HBF4 777 aa20.29■□□□□ 0.84
SKA3-205ENST00000465471 ARNT2Q9HBZ2 717 aa20.29■□□□□ 0.84
SKA3-205ENST00000465471 SMARCAL1Q9NZC9 954 aa20.29■□□□□ 0.84
SKA3-205ENST00000465471 NFKBIL1Q9UBC1 381 aaPredicted RBP20.29■□□□□ 0.84
SKA3-205ENST00000465471 ZNF185O15231 689 aa20.28■□□□□ 0.84
SKA3-205ENST00000465471 IFNB1P01574 187 aa20.28■□□□□ 0.84
SKA3-205ENST00000465471 TSHRP16473 764 aa20.28■□□□□ 0.84
SKA3-205ENST00000465471 SPINT3P49223 89 aa20.28■□□□□ 0.84
SKA3-205ENST00000465471 ARRB1P49407 418 aaPredicted RBP20.28■□□□□ 0.84
SKA3-205ENST00000465471 KIAA1024LP59773 190 aa20.28■□□□□ 0.84
SKA3-205ENST00000465471 EIF2B5Q13144 721 aaKnown RBP20.28■□□□□ 0.84
SKA3-205ENST00000465471 NFATC4Q14934 902 aa20.28■□□□□ 0.84
SKA3-205ENST00000465471 UAP1L1Q3KQV9 507 aa20.28■□□□□ 0.84
SKA3-205ENST00000465471 KANSL1Q7Z3B3 1105 aa20.28■□□□□ 0.84
SKA3-205ENST00000465471 PARGQ86W56 976 aa20.28■□□□□ 0.84
SKA3-205ENST00000465471 TTC30BQ8N4P2 665 aa20.28■□□□□ 0.84
SKA3-205ENST00000465471 SLC25A41Q8N5S1 370 aa20.28■□□□□ 0.84
SKA3-205ENST00000465471 CCHCR1Q8TD31 782 aa20.28■□□□□ 0.84
SKA3-205ENST00000465471 SAP25Q8TEE9 199 aa20.28■□□□□ 0.84
SKA3-205ENST00000465471 FUBP1Q96AE4 644 aaKnown RBP20.28■□□□□ 0.84
SKA3-205ENST00000465471 TRABDQ9H4I3 376 aa20.28■□□□□ 0.84
SKA3-205ENST00000465471 HACD3Q9P035 362 aa20.28■□□□□ 0.84
SKA3-205ENST00000465471 PNMA8BQ9ULN7 279 aaPredicted RBP20.28■□□□□ 0.84
SKA3-205ENST00000465471 SHOC2Q9UQ13 582 aa20.28■□□□□ 0.84
SKA3-205ENST00000465471 OR1A2Q9Y585 309 aa20.28■□□□□ 0.84
SKA3-205ENST00000465471 GOLGA6CA6NDK9 693 aa20.27■□□□□ 0.84
SKA3-205ENST00000465471 GOLGA6BA6NDN3 693 aa20.27■□□□□ 0.84
SKA3-205ENST00000465471 GOLGA8CPA6NN73 597 aa20.27■□□□□ 0.84
SKA3-205ENST00000465471 AURKAO14965 403 aa20.27■□□□□ 0.84
SKA3-205ENST00000465471 AP2A1O95782 977 aa20.27■□□□□ 0.84
SKA3-205ENST00000465471 GOLGA6DP0CG33 693 aa20.27■□□□□ 0.84
SKA3-205ENST00000465471 ETS1P14921 441 aa20.27■□□□□ 0.84
SKA3-205ENST00000465471 NME1P15531 152 aaKnown RBP20.27■□□□□ 0.84
SKA3-205ENST00000465471 TNNT3P45378 269 aaPredicted RBP20.27■□□□□ 0.84
SKA3-205ENST00000465471 KCNJ1P48048 391 aa20.27■□□□□ 0.84
SKA3-205ENST00000465471 THOP1P52888 689 aa20.27■□□□□ 0.84
SKA3-205ENST00000465471 DCDC1P59894 354 aa20.27■□□□□ 0.84
SKA3-205ENST00000465471 PTK2BQ14289 1009 aa20.27■□□□□ 0.84
SKA3-205ENST00000465471 PUM1Q14671 1186 aaKnown RBP eCLIP20.27■□□□□ 0.84
SKA3-205ENST00000465471 HENMT1Q5T8I9 393 aaKnown RBP20.27■□□□□ 0.84
SKA3-205ENST00000465471 FAXCQ5TGI0 409 aa20.27■□□□□ 0.84
SKA3-205ENST00000465471 TTC27Q6P3X3 843 aa20.27■□□□□ 0.84
SKA3-205ENST00000465471 PRUNE1Q86TP1 453 aa20.27■□□□□ 0.84
SKA3-205ENST00000465471 SCAMP4Q969E2 229 aa20.27■□□□□ 0.84
SKA3-205ENST00000465471 TBL1YQ9BQ87 522 aa20.27■□□□□ 0.84
SKA3-205ENST00000465471 AP1M1Q9BXS5 423 aa20.27■□□□□ 0.84
SKA3-205ENST00000465471 TEX101Q9BY14 249 aa20.27■□□□□ 0.84
SKA3-205ENST00000465471 LRRC40Q9H9A6 602 aa20.27■□□□□ 0.84
SKA3-205ENST00000465471 GOLGA6AQ9NYA3 693 aa20.27■□□□□ 0.84
SKA3-205ENST00000465471 PKD2L2Q9NZM6 624 aa20.27■□□□□ 0.84
SKA3-205ENST00000465471 PAK5Q9P286 719 aa20.27■□□□□ 0.84
SKA3-205ENST00000465471 CD84Q9UIB8 345 aa20.27■□□□□ 0.84
SKA3-205ENST00000465471 ZNF106Q9H2Y7 1883 aaKnown RBP20.26■□□□□ 0.83
SKA3-205ENST00000465471 CTAGE9A4FU28 777 aa20.26■□□□□ 0.83
SKA3-205ENST00000465471 ERI2A8K979 691 aaKnown RBP20.26■□□□□ 0.83
SKA3-205ENST00000465471 CSF2P04141 144 aa20.26■□□□□ 0.83
SKA3-205ENST00000465471 CSRP1P21291 193 aaKnown RBP20.26■□□□□ 0.83
SKA3-205ENST00000465471 RPL22P35268 128 aaKnown RBP20.26■□□□□ 0.83
SKA3-205ENST00000465471 HMGCLP35914 325 aa20.26■□□□□ 0.83
SKA3-205ENST00000465471 FDFT1P37268 417 aa20.26■□□□□ 0.83
SKA3-205ENST00000465471 IL9RQ01113 521 aa20.26■□□□□ 0.83
SKA3-205ENST00000465471 SEMA5AQ13591 1074 aa20.26■□□□□ 0.83
SKA3-205ENST00000465471 ADAMTSL4Q6UY14 1074 aa20.26■□□□□ 0.83
SKA3-205ENST00000465471 CCDC89Q8N998 374 aa20.26■□□□□ 0.83
SKA3-205ENST00000465471 AP2M1Q96CW1 435 aa20.26■□□□□ 0.83
SKA3-205ENST00000465471 APOL2Q9BQE5 337 aa20.26■□□□□ 0.83
SKA3-205ENST00000465471 GPR63Q9BZJ6 419 aa20.26■□□□□ 0.83
SKA3-205ENST00000465471 CDH19Q9H159 772 aa20.26■□□□□ 0.83
SKA3-205ENST00000465471 WDR26Q9H7D7 661 aa20.26■□□□□ 0.83
SKA3-205ENST00000465471 FEZ2Q9UHY8 353 aaPredicted RBP20.26■□□□□ 0.83
SKA3-205ENST00000465471 KLF15Q9UIH9 416 aa20.26■□□□□ 0.83
SKA3-205ENST00000465471 MYLKQ15746 1914 aa20.25■□□□□ 0.83
SKA3-205ENST00000465471 FLRT2O43155 660 aa20.25■□□□□ 0.83
SKA3-205ENST00000465471 PSMD3O43242 534 aa20.25■□□□□ 0.83
SKA3-205ENST00000465471 USP12O75317 370 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms