RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 CDK3Q00526 305 aa25.83■■□□□ 1.73
U2AF1-206ENST00000464750 NIPAL4Q0D2K0 466 aa25.83■■□□□ 1.73
U2AF1-206ENST00000464750 SPIDRQ14159 915 aa25.83■■□□□ 1.73
U2AF1-206ENST00000464750 C3orf38Q5JPI3 329 aa25.83■■□□□ 1.73
U2AF1-206ENST00000464750 ARRDC2Q8TBH0 407 aa25.83■■□□□ 1.73
U2AF1-206ENST00000464750 TRAF3IP1Q8TDR0 691 aaPredicted RBP25.83■■□□□ 1.73
U2AF1-206ENST00000464750 ATXN7L3BQ96GX2 97 aa25.83■■□□□ 1.73
U2AF1-206ENST00000464750 CRELD1Q96HD1 420 aa25.83■■□□□ 1.73
U2AF1-206ENST00000464750 CARS2Q9HA77 564 aaKnown RBP25.83■■□□□ 1.73
U2AF1-206ENST00000464750 CD84Q9UIB8 345 aa25.83■■□□□ 1.73
U2AF1-206ENST00000464750 RABGEF1Q9UJ41 708 aa25.83■■□□□ 1.73
U2AF1-206ENST00000464750 CHKBQ9Y259 395 aa25.83■■□□□ 1.73
U2AF1-206ENST00000464750 CAPN8A6NHC0 703 aa25.82■■□□□ 1.72
U2AF1-206ENST00000464750 C3orf70A6NLC5 250 aaPredicted RBP25.82■■□□□ 1.72
U2AF1-206ENST00000464750 TEAD1P28347 426 aa25.82■■□□□ 1.72
U2AF1-206ENST00000464750 PPIDQ08752 370 aaKnown RBP25.82■■□□□ 1.72
U2AF1-206ENST00000464750 TBX2Q13207 712 aaPredicted RBP25.82■■□□□ 1.72
U2AF1-206ENST00000464750 RFLNAQ6ZTI6 216 aa25.82■■□□□ 1.72
U2AF1-206ENST00000464750 TECPR1Q7Z6L1 1165 aa25.82■■□□□ 1.72
U2AF1-206ENST00000464750 VSIG1Q86XK7 387 aa25.82■■□□□ 1.72
U2AF1-206ENST00000464750 LSMEM2Q8N112 164 aa25.82■■□□□ 1.72
U2AF1-206ENST00000464750 FAM46DQ8NEK8 389 aa25.82■■□□□ 1.72
U2AF1-206ENST00000464750 GPR156Q8NFN8 814 aa25.82■■□□□ 1.72
U2AF1-206ENST00000464750 CCL4L1Q8NHW4 92 aa25.82■■□□□ 1.72
U2AF1-206ENST00000464750 GRAMD1AQ96CP6 724 aa25.82■■□□□ 1.72
U2AF1-206ENST00000464750 LGMNQ99538 433 aa25.82■■□□□ 1.72
U2AF1-206ENST00000464750 FRMD8Q9BZ67 464 aaPredicted RBP25.82■■□□□ 1.72
U2AF1-206ENST00000464750 SATB2Q9UPW6 733 aa25.82■■□□□ 1.72
U2AF1-206ENST00000464750 HEY1Q9Y5J3 304 aa25.82■■□□□ 1.72
U2AF1-206ENST00000464750 PTPRQQ9UMZ3 2332 aa25.81■■□□□ 1.72
U2AF1-206ENST00000464750 B4DGG1 531 aa25.81■■□□□ 1.72
U2AF1-206ENST00000464750 KCNK1O00180 336 aa25.81■■□□□ 1.72
U2AF1-206ENST00000464750 DXOO77932 396 aaKnown RBP25.81■■□□□ 1.72
U2AF1-206ENST00000464750 CEACAM5P06731 702 aa25.81■■□□□ 1.72
U2AF1-206ENST00000464750 ZNF30P17039 623 aa25.81■■□□□ 1.72
U2AF1-206ENST00000464750 PDX1P52945 283 aa25.81■■□□□ 1.72
U2AF1-206ENST00000464750 SLC9A4Q6AI14 798 aa25.81■■□□□ 1.72
U2AF1-206ENST00000464750 SARM1Q6SZW1 724 aa25.81■■□□□ 1.72
U2AF1-206ENST00000464750 LPCAT1Q8NF37 534 aa25.81■■□□□ 1.72
U2AF1-206ENST00000464750 OR6C4Q8NGE1 309 aa25.81■■□□□ 1.72
U2AF1-206ENST00000464750 ZNF578Q96N58 590 aaPredicted RBP25.81■■□□□ 1.72
U2AF1-206ENST00000464750 PCDH9Q9HC56 1237 aa25.81■■□□□ 1.72
U2AF1-206ENST00000464750 DNPEPQ9ULA0 475 aa25.81■■□□□ 1.72
U2AF1-206ENST00000464750 INTUQ9ULD6 942 aa25.81■■□□□ 1.72
U2AF1-206ENST00000464750 NTN3O00634 580 aaPredicted RBP25.8■■□□□ 1.72
U2AF1-206ENST00000464750 APOL1O14791 398 aa25.8■■□□□ 1.72
U2AF1-206ENST00000464750 NOBOXO60393 691 aa25.8■■□□□ 1.72
U2AF1-206ENST00000464750 PRLP01236 227 aa25.8■■□□□ 1.72
U2AF1-206ENST00000464750 JCHAINP01591 159 aa25.8■■□□□ 1.72
U2AF1-206ENST00000464750 GPR1P46091 355 aa25.8■■□□□ 1.72
U2AF1-206ENST00000464750 IFI35P80217 286 aaPredicted RBP25.8■■□□□ 1.72
U2AF1-206ENST00000464750 DPTQ07507 201 aa25.8■■□□□ 1.72
U2AF1-206ENST00000464750 ZBTB17Q13105 803 aa25.8■■□□□ 1.72
U2AF1-206ENST00000464750 LRRC38Q5VT99 294 aa25.8■■□□□ 1.72
U2AF1-206ENST00000464750 SFTPA2Q8IWL1 248 aa25.8■■□□□ 1.72
U2AF1-206ENST00000464750 AP2M1Q96CW1 435 aa25.8■■□□□ 1.72
U2AF1-206ENST00000464750 ANP32EQ9BTT0 268 aa25.8■■□□□ 1.72
U2AF1-206ENST00000464750 ABCG8Q9H221 673 aa25.8■■□□□ 1.72
U2AF1-206ENST00000464750 DPEP2Q9H4A9 486 aa25.8■■□□□ 1.72
U2AF1-206ENST00000464750 HYOU1Q9Y4L1 999 aa25.8■■□□□ 1.72
U2AF1-206ENST00000464750 UNC13CQ8NB66 2214 aa25.8■■□□□ 1.72
U2AF1-206ENST00000464750 A0A1W2PNU3 283 aaPredicted RBP25.79■■□□□ 1.72
U2AF1-206ENST00000464750 SOD1P00441 154 aa25.79■■□□□ 1.72
U2AF1-206ENST00000464750 RPLP0P05388 317 aaKnown RBP25.79■■□□□ 1.72
U2AF1-206ENST00000464750 TNNT1P13805 278 aa25.79■■□□□ 1.72
U2AF1-206ENST00000464750 CD86P42081 329 aa25.79■■□□□ 1.72
U2AF1-206ENST00000464750 SLC1A1P43005 524 aa25.79■■□□□ 1.72
U2AF1-206ENST00000464750 GNPDA1P46926 289 aa25.79■■□□□ 1.72
U2AF1-206ENST00000464750 STC1P52823 247 aa25.79■■□□□ 1.72
U2AF1-206ENST00000464750 PCBP4P57723 403 aaKnown RBP25.79■■□□□ 1.72
U2AF1-206ENST00000464750 RPL26P61254 145 aaKnown RBP25.79■■□□□ 1.72
U2AF1-206ENST00000464750 PTSQ03393 145 aa25.79■■□□□ 1.72
U2AF1-206ENST00000464750 CCDC173Q0VFZ6 552 aa25.79■■□□□ 1.72
U2AF1-206ENST00000464750 ODF2Q5BJF6 829 aa25.79■■□□□ 1.72
U2AF1-206ENST00000464750 OGFOD3Q6PK18 319 aa25.79■■□□□ 1.72
U2AF1-206ENST00000464750 RFX6Q8HWS3 928 aa25.79■■□□□ 1.72
U2AF1-206ENST00000464750 RHOT1Q8IXI2 618 aa25.79■■□□□ 1.72
U2AF1-206ENST00000464750 PTCD2Q8WV60 388 aaKnown RBP25.79■■□□□ 1.72
U2AF1-206ENST00000464750 RNF25Q96BH1 459 aaPredicted RBP25.79■■□□□ 1.72
U2AF1-206ENST00000464750 MAK16Q9BXY0 300 aaKnown RBP25.79■■□□□ 1.72
U2AF1-206ENST00000464750 TRIM5Q9C035 493 aa25.79■■□□□ 1.72
U2AF1-206ENST00000464750 ASCL3Q9NQ33 180 aa25.79■■□□□ 1.72
U2AF1-206ENST00000464750 SUFUQ9UMX1 484 aa25.79■■□□□ 1.72
U2AF1-206ENST00000464750 RPL26L1Q9UNX3 145 aaKnown RBP25.79■■□□□ 1.72
U2AF1-206ENST00000464750 ZFC3H1O60293 1989 aaKnown RBP25.78■■□□□ 1.72
U2AF1-206ENST00000464750 FUCA1P04066 466 aa25.78■■□□□ 1.72
U2AF1-206ENST00000464750 MMP2P08253 660 aa25.78■■□□□ 1.72
U2AF1-206ENST00000464750 CCL7P80098 99 aa25.78■■□□□ 1.72
U2AF1-206ENST00000464750 AP1B1Q10567 949 aa25.78■■□□□ 1.72
U2AF1-206ENST00000464750 ILF3Q12906 894 aaKnown RBP eCLIP25.78■■□□□ 1.72
U2AF1-206ENST00000464750 TCEAL1Q15170 157 aa25.78■■□□□ 1.72
U2AF1-206ENST00000464750 C14orf28Q4W4Y0 310 aa25.78■■□□□ 1.72
U2AF1-206ENST00000464750 CERCAMQ5T4B2 595 aa25.78■■□□□ 1.72
U2AF1-206ENST00000464750 DOK6Q6PKX4 331 aa25.78■■□□□ 1.72
U2AF1-206ENST00000464750 NPNTQ6UXI9 565 aa25.78■■□□□ 1.72
U2AF1-206ENST00000464750 ADAMTSL4Q6UY14 1074 aa25.78■■□□□ 1.72
U2AF1-206ENST00000464750 ZNF765Q7L2R6 523 aa25.78■■□□□ 1.72
U2AF1-206ENST00000464750 GPBAR1Q8TDU6 330 aa25.78■■□□□ 1.72
U2AF1-206ENST00000464750 SCAMP4Q969E2 229 aa25.78■■□□□ 1.72
U2AF1-206ENST00000464750 GFM1Q96RP9 751 aaKnown RBP25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms