RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 CAPN8A6NHC0 703 aa17.02■□□□□ 0.32
VPS52-215ENST00000464425 PSMD11O00231 422 aa17.02■□□□□ 0.32
VPS52-215ENST00000464425 TOR1BO14657 336 aa17.02■□□□□ 0.32
VPS52-215ENST00000464425 ZNF185O15231 689 aa17.02■□□□□ 0.32
VPS52-215ENST00000464425 FFAR2O15552 330 aa17.02■□□□□ 0.32
VPS52-215ENST00000464425 KCNN4O15554 427 aa17.02■□□□□ 0.32
VPS52-215ENST00000464425 LIASO43766 372 aa17.02■□□□□ 0.32
VPS52-215ENST00000464425 PIAS2O75928 621 aa17.02■□□□□ 0.32
VPS52-215ENST00000464425 C1SP09871 688 aa17.02■□□□□ 0.32
VPS52-215ENST00000464425 PIRTP0C851 137 aa17.02■□□□□ 0.32
VPS52-215ENST00000464425 GOLGA6DP0CG33 693 aa17.02■□□□□ 0.32
VPS52-215ENST00000464425 NME1P15531 152 aaKnown RBP17.02■□□□□ 0.32
VPS52-215ENST00000464425 HNRNPKP61978 463 aaKnown RBP eCLIP17.02■□□□□ 0.32
VPS52-215ENST00000464425 FOXK2Q01167 660 aa17.02■□□□□ 0.32
VPS52-215ENST00000464425 CDK18Q07002 472 aa17.02■□□□□ 0.32
VPS52-215ENST00000464425 NFATC4Q14934 902 aa17.02■□□□□ 0.32
VPS52-215ENST00000464425 FAXCQ5TGI0 409 aa17.02■□□□□ 0.32
VPS52-215ENST00000464425 PNCKQ6P2M8 343 aa17.02■□□□□ 0.32
VPS52-215ENST00000464425 ENPP7Q6UWV6 458 aa17.02■□□□□ 0.32
VPS52-215ENST00000464425 MACC1Q6ZN28 852 aa17.02■□□□□ 0.32
VPS52-215ENST00000464425 TECPR1Q7Z6L1 1165 aa17.02■□□□□ 0.32
VPS52-215ENST00000464425 CREG2Q8IUH2 290 aa17.02■□□□□ 0.32
VPS52-215ENST00000464425 TSACCQ96A04 125 aaPredicted RBP17.02■□□□□ 0.32
VPS52-215ENST00000464425 TCEAL2Q9H3H9 227 aaPredicted RBP17.02■□□□□ 0.32
VPS52-215ENST00000464425 USP29Q9HBJ7 922 aa17.02■□□□□ 0.32
VPS52-215ENST00000464425 GOLGA6AQ9NYA3 693 aa17.02■□□□□ 0.32
VPS52-215ENST00000464425 FTSJ1Q9UET6 329 aa17.02■□□□□ 0.32
VPS52-215ENST00000464425 FAM153AQ9UHL3 310 aa17.02■□□□□ 0.32
VPS52-215ENST00000464425 RSPH14Q9UHP6 348 aa17.02■□□□□ 0.32
VPS52-215ENST00000464425 TRHDEQ9UKU6 1024 aa17.02■□□□□ 0.32
VPS52-215ENST00000464425 DNPEPQ9ULA0 475 aa17.02■□□□□ 0.32
VPS52-215ENST00000464425 DRG1Q9Y295 367 aaKnown RBP17.02■□□□□ 0.32
VPS52-215ENST00000464425 C1orf232A0A0U1RR37 186 aa17.01■□□□□ 0.31
VPS52-215ENST00000464425 H3BM21 787 aa17.01■□□□□ 0.31
VPS52-215ENST00000464425 LDOC1O95751 146 aaPredicted RBP17.01■□□□□ 0.31
VPS52-215ENST00000464425 ATXN1LP0C7T5 689 aaKnown RBP17.01■□□□□ 0.31
VPS52-215ENST00000464425 ZNF30P17039 623 aa17.01■□□□□ 0.31
VPS52-215ENST00000464425 HTR1BP28222 390 aa17.01■□□□□ 0.31
VPS52-215ENST00000464425 STIP1P31948 543 aaKnown RBP17.01■□□□□ 0.31
VPS52-215ENST00000464425 STC1P52823 247 aa17.01■□□□□ 0.31
VPS52-215ENST00000464425 WNT3AP56704 352 aa17.01■□□□□ 0.31
VPS52-215ENST00000464425 FOXC1Q12948 553 aa17.01■□□□□ 0.31
VPS52-215ENST00000464425 OASLQ15646 514 aaKnown RBP17.01■□□□□ 0.31
VPS52-215ENST00000464425 CCDC157Q569K6 752 aa17.01■□□□□ 0.31
VPS52-215ENST00000464425 CCDC70Q6NSX1 233 aa17.01■□□□□ 0.31
VPS52-215ENST00000464425 ESRP1Q6NXG1 681 aaKnown RBP17.01■□□□□ 0.31
VPS52-215ENST00000464425 RD3Q7Z3Z2 195 aa17.01■□□□□ 0.31
VPS52-215ENST00000464425 SLCO6A1Q86UG4 719 aa17.01■□□□□ 0.31
VPS52-215ENST00000464425 PHACTR4Q8IZ21 702 aa17.01■□□□□ 0.31
VPS52-215ENST00000464425 RBFAQ8N0V3 343 aa17.01■□□□□ 0.31
VPS52-215ENST00000464425 PNPLA1Q8N8W4 532 aa17.01■□□□□ 0.31
VPS52-215ENST00000464425 LMX1AQ8TE12 382 aa17.01■□□□□ 0.31
VPS52-215ENST00000464425 C1orf54Q8WWF1 131 aa17.01■□□□□ 0.31
VPS52-215ENST00000464425 FUBP1Q96AE4 644 aaKnown RBP17.01■□□□□ 0.31
VPS52-215ENST00000464425 OXNAD1Q96HP4 312 aaPredicted RBP17.01■□□□□ 0.31
VPS52-215ENST00000464425 CNDP2Q96KP4 475 aaKnown RBP17.01■□□□□ 0.31
VPS52-215ENST00000464425 FCRL5Q96RD9 977 aa17.01■□□□□ 0.31
VPS52-215ENST00000464425 LGR4Q9BXB1 951 aa17.01■□□□□ 0.31
VPS52-215ENST00000464425 CACNB4O00305 520 aaPredicted RBP17■□□□□ 0.31
VPS52-215ENST00000464425 TRIM38O00635 465 aa17■□□□□ 0.31
VPS52-215ENST00000464425 SCAMP1O15126 338 aa17■□□□□ 0.31
VPS52-215ENST00000464425 TNFSF14O43557 240 aa17■□□□□ 0.31
VPS52-215ENST00000464425 STK10O94804 968 aaKnown RBP17■□□□□ 0.31
VPS52-215ENST00000464425 NDST3O95803 873 aa17■□□□□ 0.31
VPS52-215ENST00000464425 FTH1P19P0C7X4 201 aa17■□□□□ 0.31
VPS52-215ENST00000464425 DEKP35659 375 aaKnown RBP17■□□□□ 0.31
VPS52-215ENST00000464425 TRIM23P36406 574 aa17■□□□□ 0.31
VPS52-215ENST00000464425 PPARDQ03181 441 aa17■□□□□ 0.31
VPS52-215ENST00000464425 C1orf61Q13536 156 aa17■□□□□ 0.31
VPS52-215ENST00000464425 TCEA2Q15560 299 aa17■□□□□ 0.31
VPS52-215ENST00000464425 SLC14A2Q15849 920 aa17■□□□□ 0.31
VPS52-215ENST00000464425 CDKN3Q16667 212 aa17■□□□□ 0.31
VPS52-215ENST00000464425 CYP1B1Q16678 543 aa17■□□□□ 0.31
VPS52-215ENST00000464425 ALG11Q2TAA5 492 aa17■□□□□ 0.31
VPS52-215ENST00000464425 ANKRD20A2Q5SQ80 823 aa17■□□□□ 0.31
VPS52-215ENST00000464425 ANKRD20A1Q5TYW2 823 aa17■□□□□ 0.31
VPS52-215ENST00000464425 ANKRD20A3Q5VUR7 823 aa17■□□□□ 0.31
VPS52-215ENST00000464425 RAET1GQ6H3X3 334 aa17■□□□□ 0.31
VPS52-215ENST00000464425 KDELC1Q6UW63 502 aa17■□□□□ 0.31
VPS52-215ENST00000464425 GLRX5Q86SX6 157 aa17■□□□□ 0.31
VPS52-215ENST00000464425 HID1Q8IV36 788 aa17■□□□□ 0.31
VPS52-215ENST00000464425 SLC25A41Q8N5S1 370 aa17■□□□□ 0.31
VPS52-215ENST00000464425 PRELID2Q8N945 189 aa17■□□□□ 0.31
VPS52-215ENST00000464425 ZNF548Q8NEK5 533 aaPredicted RBP17■□□□□ 0.31
VPS52-215ENST00000464425 IPMKQ8NFU5 416 aa17■□□□□ 0.31
VPS52-215ENST00000464425 CCDC110Q8TBZ0 833 aa17■□□□□ 0.31
VPS52-215ENST00000464425 ATG4AQ8WYN0 398 aa17■□□□□ 0.31
VPS52-215ENST00000464425 SCAMP4Q969E2 229 aa17■□□□□ 0.31
VPS52-215ENST00000464425 AP2M1Q96CW1 435 aa17■□□□□ 0.31
VPS52-215ENST00000464425 WDR92Q96MX6 357 aa17■□□□□ 0.31
VPS52-215ENST00000464425 LYSMD1Q96S90 227 aa17■□□□□ 0.31
VPS52-215ENST00000464425 SLC13A1Q9BZW2 595 aa17■□□□□ 0.31
VPS52-215ENST00000464425 ABCG8Q9H221 673 aa17■□□□□ 0.31
VPS52-215ENST00000464425 WDR26Q9H7D7 661 aa17■□□□□ 0.31
VPS52-215ENST00000464425 KCTD5Q9NXV2 234 aa17■□□□□ 0.31
VPS52-215ENST00000464425 SHOC2Q9UQ13 582 aa17■□□□□ 0.31
VPS52-215ENST00000464425 ARID1BQ8NFD5 2236 aaPredicted RBP17■□□□□ 0.31
VPS52-215ENST00000464425 C5orf60A6NFR6 353 aa16.99■□□□□ 0.31
VPS52-215ENST00000464425 TMEM202A6NGA9 273 aa16.99■□□□□ 0.31
VPS52-215ENST00000464425 SIGLEC6O43699 453 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms