RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 ANKRD46Q86W74 232 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 OR13C4Q8NGS5 318 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 ZNF483Q8TF39 744 aaPredicted RBP9.08□□□□□ -0.96
HPS4-208ENST00000464362 EZH1Q92800 747 aaPredicted RBP9.08□□□□□ -0.96
HPS4-208ENST00000464362 UTP4Q969X6 686 aaKnown RBP9.08□□□□□ -0.96
HPS4-208ENST00000464362 HMCESQ96FZ2 354 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 SH3GL1Q99961 368 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 FETUBQ9UGM5 382 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 PADI3Q9ULW8 664 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 SATB2Q9UPW6 733 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 TDRKHQ9Y2W6 561 aaKnown RBP9.08□□□□□ -0.96
HPS4-208ENST00000464362 PTCH2Q9Y6C5 1203 aa9.08□□□□□ -0.96
HPS4-208ENST00000464362 E7ENX8 843 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 SLC22A3O75751 556 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 CCR3P51677 355 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 ALDH6A1Q02252 535 aaKnown RBP9.07□□□□□ -0.96
HPS4-208ENST00000464362 IRF8Q02556 426 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 MAP3K10Q02779 954 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 TARBP2Q15633 366 aaKnown RBP9.07□□□□□ -0.96
HPS4-208ENST00000464362 NADK2Q4G0N4 442 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 TIGD5Q53EQ6 642 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 GLYATQ6IB77 296 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 SYT12Q8IV01 421 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 GALNT15Q8N3T1 639 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 SFRP1Q8N474 314 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 RDH11Q8TC12 318 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 PLEKHA8Q96JA3 519 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 CDK15Q96Q40 435 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 PKP2Q99959 881 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 BCO2Q9BYV7 579 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 PCDH12Q9NPG4 1184 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 KCTD3Q9Y597 815 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 COPG1Q9Y678 874 aaKnown RBP9.07□□□□□ -0.96
HPS4-208ENST00000464362 MYH1P12882 1939 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 MYH4Q9Y623 1939 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 LINGO3P0C6S8 592 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 SPATA31D3P0C874 917 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 GM2AP17900 193 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 TYMPP19971 482 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 HOXD10P28358 340 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 HNF4AP41235 474 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 FCGRTP55899 365 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 ECT2LQ008S8 904 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 ARHGAP1Q07960 439 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 ACSM2AQ08AH3 577 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 NR1D2Q14995 579 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 ACSM2BQ68CK6 577 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 SPATA31D4Q6ZUB0 917 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 OSTM1Q86WC4 334 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 FAM81AQ8TBF8 368 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 UGT2B28Q9BY64 529 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 OSGEPL1Q9H4B0 414 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 ABCB10Q9NRK6 738 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 RCOR3Q9P2K3 495 aaPredicted RBP9.07□□□□□ -0.96
HPS4-208ENST00000464362 TRPC4Q9UBN4 977 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 PRKAG2Q9UGJ0 569 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 ASCC3Q8N3C0 2202 aaKnown RBP9.07□□□□□ -0.96
HPS4-208ENST00000464362 OR4F21O95013 312 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 LRG1P02750 347 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 DBTP11182 482 aaKnown RBP9.07□□□□□ -0.96
HPS4-208ENST00000464362 PRKCHP24723 683 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 TKTP29401 623 aaKnown RBP9.07□□□□□ -0.96
HPS4-208ENST00000464362 CYP2C18P33260 490 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 SLC18A1P54219 525 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 LIPEQ05469 1076 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 SLC10A7Q0GE19 358 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 MBLAC2Q68D91 279 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 MTMR14Q8NCE2 650 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 TEPSINQ96N21 525 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 SPATA16Q9BXB7 569 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 FAM126AQ9BYI3 521 aaPredicted RBP9.07□□□□□ -0.96
HPS4-208ENST00000464362 FBXW11Q9UKB1 542 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 KCNH4Q9UQ05 1017 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 CNTN6Q9UQ52 1028 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 STYXL1Q9Y6J8 313 aa9.07□□□□□ -0.96
HPS4-208ENST00000464362 EP400Q96L91 3159 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 H3BN98 237 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 ABLIM1O14639 778 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 TOR1BO14657 336 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 TP73O15350 636 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 LZTS3O60299 673 aaPredicted RBP9.06□□□□□ -0.96
HPS4-208ENST00000464362 LPOP22079 712 aaPredicted RBP9.06□□□□□ -0.96
HPS4-208ENST00000464362 PFKPQ01813 784 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 ADGRE1Q14246 886 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 FGD3Q5JSP0 725 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 CCDC80Q76M96 950 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 TRMT11Q7Z4G4 463 aaKnown RBP9.06□□□□□ -0.96
HPS4-208ENST00000464362 NANOGNBQ7Z5D8 188 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 MON1AQ86VX9 555 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 RASAL3Q86YV0 1011 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 CPNE9Q8IYJ1 553 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 NKAPQ8N5F7 415 aaKnown RBP9.06□□□□□ -0.96
HPS4-208ENST00000464362 CPSF7Q8N684 471 aaKnown RBP9.06□□□□□ -0.96
HPS4-208ENST00000464362 OR2T34Q8NGX1 318 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 OR2T3Q8NH03 318 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 ZFYVE19Q96K21 471 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 OR52E6Q96RD3 313 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 REXO4Q9GZR2 422 aaKnown RBP9.06□□□□□ -0.96
HPS4-208ENST00000464362 UNC93B1Q9H1C4 597 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 SIRPGQ9P1W8 387 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms