RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 C16orf72Q14CZ0 275 aa12.81□□□□□ -0.36
NUP58-206ENST00000463407 TMPRSS11BQ86T26 416 aa12.81□□□□□ -0.36
NUP58-206ENST00000463407 FAM129CQ86XR2 697 aa12.81□□□□□ -0.36
NUP58-206ENST00000463407 CD101Q93033 1021 aa12.81□□□□□ -0.36
NUP58-206ENST00000463407 REXO5Q96IC2 774 aaKnown RBP12.81□□□□□ -0.36
NUP58-206ENST00000463407 RIBC2Q9H4K1 309 aa12.81□□□□□ -0.36
NUP58-206ENST00000463407 CAB39LQ9H9S4 337 aa12.81□□□□□ -0.36
NUP58-206ENST00000463407 C15orf38-AP3S2A0A0A6YYH1 394 aa12.81□□□□□ -0.36
NUP58-206ENST00000463407 DNM1LO00429 736 aa12.81□□□□□ -0.36
NUP58-206ENST00000463407 ZCCHC18P0CG32 403 aa12.81□□□□□ -0.36
NUP58-206ENST00000463407 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.81□□□□□ -0.36
NUP58-206ENST00000463407 ARPINQ7Z6K5 226 aa12.81□□□□□ -0.36
NUP58-206ENST00000463407 PCDH20Q8N6Y1 951 aaKnown RBP12.81□□□□□ -0.36
NUP58-206ENST00000463407 ACMSDQ8TDX5 336 aa12.81□□□□□ -0.36
NUP58-206ENST00000463407 SLC38A3Q99624 504 aa12.81□□□□□ -0.36
NUP58-206ENST00000463407 GBA3Q9H227 469 aa12.81□□□□□ -0.36
NUP58-206ENST00000463407 RPRD1BQ9NQG5 326 aaKnown RBP12.81□□□□□ -0.36
NUP58-206ENST00000463407 AP3M1Q9Y2T2 418 aa12.81□□□□□ -0.36
NUP58-206ENST00000463407 YIPF1Q9Y548 306 aa12.81□□□□□ -0.36
NUP58-206ENST00000463407 KRT75O95678 551 aa12.81□□□□□ -0.36
NUP58-206ENST00000463407 PROCP04070 461 aa12.81□□□□□ -0.36
NUP58-206ENST00000463407 ZNF24P17028 368 aa12.81□□□□□ -0.36
NUP58-206ENST00000463407 R3HCC1LQ7Z5L2 792 aaKnown RBP12.81□□□□□ -0.36
NUP58-206ENST00000463407 ADGRG2Q8IZP9 1017 aa12.81□□□□□ -0.36
NUP58-206ENST00000463407 PIWIL2Q8TC59 973 aaKnown RBP12.81□□□□□ -0.36
NUP58-206ENST00000463407 ZNF384Q8TF68 577 aa12.81□□□□□ -0.36
NUP58-206ENST00000463407 METTL21AQ8WXB1 218 aa12.81□□□□□ -0.36
NUP58-206ENST00000463407 SHDQ96IW2 340 aa12.81□□□□□ -0.36
NUP58-206ENST00000463407 CIDEBQ9UHD4 219 aa12.81□□□□□ -0.36
NUP58-206ENST00000463407 ANGPT4Q9Y264 503 aa12.81□□□□□ -0.36
NUP58-206ENST00000463407 ZNF711Q9Y462 761 aa12.81□□□□□ -0.36
NUP58-206ENST00000463407 FAM208AQ9UK61 1670 aaKnown RBP12.81□□□□□ -0.36
NUP58-206ENST00000463407 XRN1Q8IZH2 1706 aaKnown RBP12.81□□□□□ -0.36
NUP58-206ENST00000463407 INPPL1O15357 1258 aa12.81□□□□□ -0.36
NUP58-206ENST00000463407 PEX1O43933 1283 aa12.81□□□□□ -0.36
NUP58-206ENST00000463407 SSR2P43308 183 aa12.81□□□□□ -0.36
NUP58-206ENST00000463407 PKNOX1P55347 436 aa12.81□□□□□ -0.36
NUP58-206ENST00000463407 LIPMQ5VYY2 423 aa12.81□□□□□ -0.36
NUP58-206ENST00000463407 OR4A15Q8NGL6 344 aa12.81□□□□□ -0.36
NUP58-206ENST00000463407 STYXQ8WUJ0 223 aa12.81□□□□□ -0.36
NUP58-206ENST00000463407 SPATA5L1Q9BVQ7 753 aa12.81□□□□□ -0.36
NUP58-206ENST00000463407 REXO2Q9Y3B8 237 aaKnown RBP12.81□□□□□ -0.36
NUP58-206ENST00000463407 NR2E1Q9Y466 385 aa12.81□□□□□ -0.36
NUP58-206ENST00000463407 ACTL7BQ9Y614 415 aa12.81□□□□□ -0.36
NUP58-206ENST00000463407 TCRBV9S1A1TA0A576 114 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 LRIG2O94898 1065 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 CSKP41240 450 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 ASPAP45381 313 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 PACS1Q6VY07 963 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 ALG3Q92685 438 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 FUBP3Q96I24 572 aaKnown RBP eCLIP12.8□□□□□ -0.36
NUP58-206ENST00000463407 PRRG4Q9BZD6 226 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 ENOPH1Q9UHY7 261 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 PSMD13Q9UNM6 376 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 KCPQ6ZWJ8 1503 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 PIPSLA2A3N6 862 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 ATXN7L2Q5T6C5 722 aaPredicted RBP12.8□□□□□ -0.36
NUP58-206ENST00000463407 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.8□□□□□ -0.36
NUP58-206ENST00000463407 WFIKKN2Q8TEU8 576 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 MMADHCQ9H3L0 296 aaPredicted RBP12.8□□□□□ -0.36
NUP58-206ENST00000463407 SAR1AQ9NR31 198 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 PAPOLBQ9NRJ5 636 aaKnown RBP12.8□□□□□ -0.36
NUP58-206ENST00000463407 FBXW11Q9UKB1 542 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 FZD10Q9ULW2 581 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 COG5Q9UP83 839 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 ZNF142P52746 1687 aaPredicted RBP12.8□□□□□ -0.36
NUP58-206ENST00000463407 DLG5Q8TDM6 1919 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 RNF225M0QZC1 329 aaPredicted RBP12.8□□□□□ -0.36
NUP58-206ENST00000463407 PRMT5O14744 637 aaPredicted RBP12.8□□□□□ -0.36
NUP58-206ENST00000463407 GJA1P17302 382 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 ADRM1Q16186 407 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 XKR4Q5GH76 650 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 CHST15Q7LFX5 561 aaPredicted RBP12.8□□□□□ -0.36
NUP58-206ENST00000463407 C10orf107Q8IVU9 208 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 TMEM192Q8IY95 271 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 RTL3Q8N8U3 475 aaKnown RBP12.8□□□□□ -0.36
NUP58-206ENST00000463407 SEMA6AQ9H2E6 1030 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 XPR1Q9UBH6 696 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 PRAMEF1O95521 474 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 ANXA6P08133 673 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 ADH5P11766 374 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 CMPK1P30085 196 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 L1CAMP32004 1257 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 DRG2P55039 364 aaKnown RBP12.8□□□□□ -0.36
NUP58-206ENST00000463407 MAPKAPK3Q16644 382 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 LSM12Q3MHD2 195 aaKnown RBP12.8□□□□□ -0.36
NUP58-206ENST00000463407 BHLHE22Q8NFJ8 381 aaPredicted RBP12.8□□□□□ -0.36
NUP58-206ENST00000463407 FBXO30Q8TB52 745 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 TFAP2BQ92481 460 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 CORO2BQ9UQ03 480 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 PIK3R1P27986 724 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 HECTD2Q5U5R9 776 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 IRGCQ6NXR0 463 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 ZNF549Q6P9A3 640 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 ACSS3Q9H6R3 686 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 APOBEC3GQ9HC16 384 aaKnown RBP12.8□□□□□ -0.36
NUP58-206ENST00000463407 ERVK-5Q9HDB9 667 aa12.8□□□□□ -0.36
NUP58-206ENST00000463407 SUCOQ9UBS9 1254 aaKnown RBP12.8□□□□□ -0.36
NUP58-206ENST00000463407 MATN3O15232 486 aa12.79□□□□□ -0.36
NUP58-206ENST00000463407 TM7SF2O76062 418 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms