RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 FAM187AA6NFU0 413 aa11.77□□□□□ -0.53
CPNE1-221ENST00000462352 DNALI1O14645 258 aaPredicted RBP11.77□□□□□ -0.53
CPNE1-221ENST00000462352 BUD23O43709 281 aaKnown RBP11.77□□□□□ -0.53
CPNE1-221ENST00000462352 TMEM63AO94886 807 aa11.77□□□□□ -0.53
CPNE1-221ENST00000462352 WNT1P04628 370 aa11.77□□□□□ -0.53
CPNE1-221ENST00000462352 CFIP05156 583 aa11.77□□□□□ -0.53
CPNE1-221ENST00000462352 PCCBP05166 539 aa11.77□□□□□ -0.53
CPNE1-221ENST00000462352 IVDP26440 423 aa11.77□□□□□ -0.53
CPNE1-221ENST00000462352 SPINT3P49223 89 aa11.77□□□□□ -0.53
CPNE1-221ENST00000462352 CSNK1EP49674 416 aaKnown RBP11.77□□□□□ -0.53
CPNE1-221ENST00000462352 DPTQ07507 201 aa11.77□□□□□ -0.53
CPNE1-221ENST00000462352 SPEM2Q0P670 501 aa11.77□□□□□ -0.53
CPNE1-221ENST00000462352 POU6F1Q14863 301 aa11.77□□□□□ -0.53
CPNE1-221ENST00000462352 TAF1AQ15573 450 aaPredicted RBP11.77□□□□□ -0.53
CPNE1-221ENST00000462352 TRIM61Q5EBN2 209 aa11.77□□□□□ -0.53
CPNE1-221ENST00000462352 CERCAMQ5T4B2 595 aa11.77□□□□□ -0.53
CPNE1-221ENST00000462352 IZUMO3Q5VZ72 239 aa11.77□□□□□ -0.53
CPNE1-221ENST00000462352 ESRP1Q6NXG1 681 aaKnown RBP11.77□□□□□ -0.53
CPNE1-221ENST00000462352 SLC23A3Q6PIS1 610 aa11.77□□□□□ -0.53
CPNE1-221ENST00000462352 KDM7AQ6ZMT4 941 aa11.77□□□□□ -0.53
CPNE1-221ENST00000462352 ZNF534Q76KX8 674 aa11.77□□□□□ -0.53
CPNE1-221ENST00000462352 ZNF765Q7L2R6 523 aa11.77□□□□□ -0.53
CPNE1-221ENST00000462352 ABI3BPQ7Z7G0 1075 aa11.77□□□□□ -0.53
CPNE1-221ENST00000462352 NRSN1Q8IZ57 195 aa11.77□□□□□ -0.53
CPNE1-221ENST00000462352 DCLK2Q8N568 766 aa11.77□□□□□ -0.53
CPNE1-221ENST00000462352 NAT8LQ8N9F0 302 aa11.77□□□□□ -0.53
CPNE1-221ENST00000462352 MFSD2AQ8NA29 543 aa11.77□□□□□ -0.53
CPNE1-221ENST00000462352 PLA2G15Q8NCC3 412 aa11.77□□□□□ -0.53
CPNE1-221ENST00000462352 MNS1Q8NEH6 495 aa11.77□□□□□ -0.53
CPNE1-221ENST00000462352 BRSK1Q8TDC3 778 aa11.77□□□□□ -0.53
CPNE1-221ENST00000462352 SCAMP4Q969E2 229 aa11.77□□□□□ -0.53
CPNE1-221ENST00000462352 ABCG8Q9H221 673 aa11.77□□□□□ -0.53
CPNE1-221ENST00000462352 CAPN10Q9HC96 672 aa11.77□□□□□ -0.53
CPNE1-221ENST00000462352 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.77□□□□□ -0.532e-16■■■□□ 16.4
CPNE1-221ENST00000462352 IL17CQ9P0M4 197 aa11.77□□□□□ -0.53
CPNE1-221ENST00000462352 ARL5AQ9Y689 179 aa11.77□□□□□ -0.53
CPNE1-221ENST00000462352 A0A1B0GVT2 93 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 CTAGE15A4D2H0 777 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 RGSL1A5PLK6 1076 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 C2orf81A6NN90 581 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 A6NNZ2 444 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 EFCAB8A8MWE9 144 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 K7ESM1 405 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 KHNYNO15037 678 aaKnown RBP11.76□□□□□ -0.53
CPNE1-221ENST00000462352 VILLO15195 856 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 LRP3O75074 770 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 CRTAMO95727 393 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 ZNF806P0C7X5 589 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 CTAGE8P0CG41 777 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 THEGLP0DJG4 465 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 BPIP17213 487 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 LPOP22079 712 aaPredicted RBP11.76□□□□□ -0.53
CPNE1-221ENST00000462352 PFN3P60673 137 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 SARNPP82979 210 aaKnown RBP11.76□□□□□ -0.53
CPNE1-221ENST00000462352 MTM1Q13496 603 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 INPP5AQ14642 412 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 TEAD4Q15561 434 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 DNTTIP2Q5QJE6 756 aaKnown RBP11.76□□□□□ -0.53
CPNE1-221ENST00000462352 RNASEH2BQ5TBB1 312 aaKnown RBP11.76□□□□□ -0.53
CPNE1-221ENST00000462352 TCEAL6Q6IPX3 200 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 LRRC8BQ6P9F7 803 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 KYAT3Q6YP21 454 aaKnown RBP11.76□□□□□ -0.53
CPNE1-221ENST00000462352 PCGF5Q86SE9 256 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 CTAGE6Q86UF2 777 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 IQCHQ86VS3 1027 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 NLRP8Q86W28 1048 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 CTAGE4Q8IX94 777 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 PPIL6Q8IXY8 311 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 PELI3Q8N2H9 469 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 CEP112Q8N8E3 955 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 GPR26Q8NDV2 337 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 OR13H1Q8NG92 308 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 FAM174AQ8TBP5 190 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 TCEAL3Q969E4 200 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 AP2M1Q96CW1 435 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 KLHDC7BQ96G42 594 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 HINFPQ9BQA5 517 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 RIOK2Q9BVS4 552 aaKnown RBP11.76□□□□□ -0.53
CPNE1-221ENST00000462352 TRIM31Q9BZY9 425 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 CDH19Q9H159 772 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 FAM83DQ9H4H8 585 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 BPIFA1Q9NP55 256 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 PARD6AQ9NPB6 346 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 RAD18Q9NS91 495 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 SEMA4GQ9NTN9 838 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 SLC6A14Q9UN76 642 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 KCTD3Q9Y597 815 aa11.76□□□□□ -0.53
CPNE1-221ENST00000462352 GOLGA8MH3BSY2 632 aa11.75□□□□□ -0.53
CPNE1-221ENST00000462352 AP3B1O00203 1094 aa11.75□□□□□ -0.53
CPNE1-221ENST00000462352 TLR4O00206 839 aa11.75□□□□□ -0.53
CPNE1-221ENST00000462352 TOR1BO14657 336 aa11.75□□□□□ -0.53
CPNE1-221ENST00000462352 STX7O15400 261 aaKnown RBP11.75□□□□□ -0.53
CPNE1-221ENST00000462352 LDB2O43679 373 aa11.75□□□□□ -0.53
CPNE1-221ENST00000462352 PPFIA2O75334 1257 aa11.75□□□□□ -0.53
CPNE1-221ENST00000462352 SEC31AO94979 1220 aaKnown RBP11.75□□□□□ -0.53
CPNE1-221ENST00000462352 MLNP12872 115 aa11.75□□□□□ -0.53
CPNE1-221ENST00000462352 TSHRP16473 764 aa11.75□□□□□ -0.53
CPNE1-221ENST00000462352 TRIM23P36406 574 aa11.75□□□□□ -0.53
CPNE1-221ENST00000462352 RABIFP47224 123 aa11.75□□□□□ -0.53
CPNE1-221ENST00000462352 NPY2RP49146 381 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms