RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 LRP4O75096 1905 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 hCG_1818297A0A087WSY0 165 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 IGHV1OR15-9A0A0B4J2B8 117 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 CCDC66A2RUB6 948 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 TTC34A8MYJ7 566 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 GOLGA6L6A8MZA4 724 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 MIF4GDA9UHW6 222 aaKnown RBP5.82□□□□□ -1.48
VPS36-202ENST00000462289 K7ERQ8 282 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 RNF103O00237 685 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 MFSD11O43934 449 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 IPO7O95373 1038 aaKnown RBP5.82□□□□□ -1.48
VPS36-202ENST00000462289 MOCS3O95396 460 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 GSRP00390 522 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 CTSLP07711 333 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 CCDC175P0C221 793 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 BMP7P18075 431 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 TGM1P22735 817 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 DRD3P35462 400 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 ARL4AP40617 200 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 GARSP41250 739 aaKnown RBP5.82□□□□□ -1.48
VPS36-202ENST00000462289 STK19P49842 368 aaPredicted RBP5.82□□□□□ -1.48
VPS36-202ENST00000462289 CDH6P55285 790 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 GEMIN4P57678 1058 aaKnown RBP5.82□□□□□ -1.48
VPS36-202ENST00000462289 RPS14P62263 151 aaKnown RBP5.82□□□□□ -1.48
VPS36-202ENST00000462289 IL10RBQ08334 325 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 ADCY2Q08462 1091 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 PPIDQ08752 370 aaKnown RBP5.82□□□□□ -1.48
VPS36-202ENST00000462289 NSUN2Q08J23 767 aaKnown RBP eCLIP5.82□□□□□ -1.48
VPS36-202ENST00000462289 KIF5AQ12840 1032 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 IHHQ14623 411 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 POLD3Q15054 466 aaPredicted RBP5.82□□□□□ -1.48
VPS36-202ENST00000462289 PRKD1Q15139 912 aaPredicted RBP5.82□□□□□ -1.48
VPS36-202ENST00000462289 DLG2Q15700 870 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 TFDP3Q5H9I0 405 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 TMCO4Q5TGY1 634 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 RETSATQ6NUM9 610 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 C22orf39Q6P5X5 142 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 MFSD7Q6UXD7 560 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 SERPINA13PQ6UXR4 307 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 BBS12Q6ZW61 710 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 MAP7D3Q8IWC1 876 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 CHPFQ8IZ52 775 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 CCDC33Q8N5R6 958 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 TMIEQ8NEW7 156 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 KIAA1524Q8TCG1 905 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 HCAR2Q8TDS4 363 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 ECHDC3Q96DC8 303 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 LRIG1Q96JA1 1093 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 LOXL4Q96JB6 756 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 IL12RB2Q99665 862 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 MGME1Q9BQP7 344 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 ORAI3Q9BRQ5 295 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 TLR10Q9BXR5 811 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 CPEB1Q9BZB8 566 aaKnown RBP5.82□□□□□ -1.48
VPS36-202ENST00000462289 TSGA10Q9BZW7 698 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 SLC39A8Q9C0K1 460 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 ZCCHC4Q9H5U6 513 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 TNFRSF12AQ9NP84 129 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 ZDHHC4Q9NPG8 344 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 DDX56Q9NY93 547 aaKnown RBP5.82□□□□□ -1.48
VPS36-202ENST00000462289 KLHL14Q9P2G3 628 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 DKK3Q9UBP4 350 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 SUN2Q9UH99 717 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 DNAI1Q9UI46 699 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 VPS28Q9UK41 221 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 ACSL6Q9UKU0 697 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 FZD4Q9ULV1 537 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 PLA2G4CQ9UP65 541 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 PPP2R2CQ9Y2T4 447 aa5.82□□□□□ -1.48
VPS36-202ENST00000462289 GPR55Q9Y2T6 319 aaPredicted RBP5.82□□□□□ -1.48
VPS36-202ENST00000462289 TMEM131Q92545 1883 aa5.81□□□□□ -1.48
VPS36-202ENST00000462289 TCRBV21S2A2A0A5A6 115 aa5.81□□□□□ -1.48
VPS36-202ENST00000462289 ARHGAP42A6NI28 874 aa5.81□□□□□ -1.48
VPS36-202ENST00000462289 J3KR12 359 aa5.81□□□□□ -1.48
VPS36-202ENST00000462289 TRAFD1O14545 582 aaPredicted RBP5.81□□□□□ -1.48
VPS36-202ENST00000462289 MUSKO15146 869 aa5.81□□□□□ -1.48
VPS36-202ENST00000462289 SHOXO15266 292 aa5.81□□□□□ -1.48
VPS36-202ENST00000462289 SLC7A4O43246 635 aa5.81□□□□□ -1.48
VPS36-202ENST00000462289 HTRA2O43464 458 aaPredicted RBP5.81□□□□□ -1.48
VPS36-202ENST00000462289 LATO43561 262 aa5.81□□□□□ -1.48
VPS36-202ENST00000462289 KRT86O43790 486 aa5.81□□□□□ -1.48
VPS36-202ENST00000462289 CREB3O43889 395 aa5.81□□□□□ -1.48
VPS36-202ENST00000462289 ZNF217O75362 1048 aa5.81□□□□□ -1.48
VPS36-202ENST00000462289 TMCC1O94876 653 aa5.81□□□□□ -1.48
VPS36-202ENST00000462289 HLA-EP13747 358 aa5.81□□□□□ -1.48
VPS36-202ENST00000462289 VAV1P15498 845 aa5.81□□□□□ -1.48
VPS36-202ENST00000462289 CCNCP24863 283 aa5.81□□□□□ -1.48
VPS36-202ENST00000462289 SERPINB6P35237 376 aa5.81□□□□□ -1.48
VPS36-202ENST00000462289 HOXD12P35452 270 aa5.81□□□□□ -1.48
VPS36-202ENST00000462289 HSPA9P38646 679 aaKnown RBP5.81□□□□□ -1.48
VPS36-202ENST00000462289 NR2C2P49116 596 aa5.81□□□□□ -1.48
VPS36-202ENST00000462289 FNTBP49356 437 aa5.81□□□□□ -1.48
VPS36-202ENST00000462289 PAPOLAP51003 745 aaKnown RBP5.81□□□□□ -1.48
VPS36-202ENST00000462289 TAS2R38P59533 333 aa5.81□□□□□ -1.48
VPS36-202ENST00000462289 IFI35P80217 286 aaPredicted RBP5.81□□□□□ -1.48
VPS36-202ENST00000462289 GBE1Q04446 702 aa5.81□□□□□ -1.48
VPS36-202ENST00000462289 CSTF1Q05048 431 aaKnown RBP5.81□□□□□ -1.48
VPS36-202ENST00000462289 LAPTM5Q13571 262 aa5.81□□□□□ -1.48
VPS36-202ENST00000462289 HNRNPDQ14103 355 aaKnown RBP5.81□□□□□ -1.48
VPS36-202ENST00000462289 KIR3DS1Q14943 382 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms