RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 CD86P42081 329 aa10.16□□□□□ -0.78
SF3A3-204ENST00000462258 NOP2P46087 812 aaKnown RBP10.16□□□□□ -0.78
SF3A3-204ENST00000462258 HADHBP55084 474 aaKnown RBP10.16□□□□□ -0.78
SF3A3-204ENST00000462258 CDK3Q00526 305 aa10.16□□□□□ -0.78
SF3A3-204ENST00000462258 AP1B1Q10567 949 aa10.16□□□□□ -0.78
SF3A3-204ENST00000462258 IHHQ14623 411 aa10.16□□□□□ -0.78
SF3A3-204ENST00000462258 RTP5Q14D33 572 aa10.16□□□□□ -0.78
SF3A3-204ENST00000462258 PDK1Q15118 436 aa10.16□□□□□ -0.78
SF3A3-204ENST00000462258 SPA17Q15506 151 aa10.16□□□□□ -0.78
SF3A3-204ENST00000462258 C11orf63Q6NUN7 778 aa10.16□□□□□ -0.78
SF3A3-204ENST00000462258 LVRNQ6Q4G3 990 aa10.16□□□□□ -0.78
SF3A3-204ENST00000462258 MFSD7Q6UXD7 560 aa10.16□□□□□ -0.78
SF3A3-204ENST00000462258 NPNTQ6UXI9 565 aa10.16□□□□□ -0.78
SF3A3-204ENST00000462258 Q6ZVL8 140 aa10.16□□□□□ -0.78
SF3A3-204ENST00000462258 CCDC170Q8IYT3 715 aa10.16□□□□□ -0.78
SF3A3-204ENST00000462258 SDR16C5Q8N3Y7 309 aa10.16□□□□□ -0.78
SF3A3-204ENST00000462258 CCDC3Q9BQI4 270 aa10.16□□□□□ -0.78
SF3A3-204ENST00000462258 TEX101Q9BY14 249 aa10.16□□□□□ -0.78
SF3A3-204ENST00000462258 CEP41Q9BYV8 373 aa10.16□□□□□ -0.78
SF3A3-204ENST00000462258 RBSNQ9H1K0 784 aa10.16□□□□□ -0.78
SF3A3-204ENST00000462258 SUDS3Q9H7L9 328 aaPredicted RBP10.16□□□□□ -0.78
SF3A3-204ENST00000462258 SYNDIG1Q9H7V2 258 aa10.16□□□□□ -0.78
SF3A3-204ENST00000462258 CARS2Q9HA77 564 aaKnown RBP10.16□□□□□ -0.78
SF3A3-204ENST00000462258 PCDH9Q9HC56 1237 aa10.16□□□□□ -0.78
SF3A3-204ENST00000462258 CYP4F12Q9HCS2 524 aa10.16□□□□□ -0.78
SF3A3-204ENST00000462258 SEPT10Q9P0V9 454 aa10.16□□□□□ -0.78
SF3A3-204ENST00000462258 GULP1Q9UBP9 304 aa10.16□□□□□ -0.78
SF3A3-204ENST00000462258 CD84Q9UIB8 345 aa10.16□□□□□ -0.78
SF3A3-204ENST00000462258 GPR34Q9UPC5 381 aa10.16□□□□□ -0.78
SF3A3-204ENST00000462258 CHKBQ9Y259 395 aa10.16□□□□□ -0.78
SF3A3-204ENST00000462258 GPSM3Q9Y4H4 160 aa10.16□□□□□ -0.78
SF3A3-204ENST00000462258 A0A0A6YYK5 440 aaPredicted RBP10.15□□□□□ -0.78
SF3A3-204ENST00000462258 SOWAHDA6NJG2 315 aa10.15□□□□□ -0.78
SF3A3-204ENST00000462258 B4DGG1 531 aa10.15□□□□□ -0.78
SF3A3-204ENST00000462258 BRINP1O60477 761 aa10.15□□□□□ -0.78
SF3A3-204ENST00000462258 TCEA3O75764 348 aa10.15□□□□□ -0.78
SF3A3-204ENST00000462258 IPO7O95373 1038 aaKnown RBP10.15□□□□□ -0.78
SF3A3-204ENST00000462258 SOD1P00441 154 aa10.15□□□□□ -0.78
SF3A3-204ENST00000462258 MMP2P08253 660 aa10.15□□□□□ -0.78
SF3A3-204ENST00000462258 TEAD1P28347 426 aa10.15□□□□□ -0.78
SF3A3-204ENST00000462258 CDKN2BP42772 138 aa10.15□□□□□ -0.78
SF3A3-204ENST00000462258 GPR1P46091 355 aa10.15□□□□□ -0.78
SF3A3-204ENST00000462258 MARCKSL1P49006 195 aa10.15□□□□□ -0.78
SF3A3-204ENST00000462258 STC1P52823 247 aa10.15□□□□□ -0.78
SF3A3-204ENST00000462258 RPL26P61254 145 aaKnown RBP10.15□□□□□ -0.78
SF3A3-204ENST00000462258 SKOR1P84550 965 aa10.15□□□□□ -0.78
SF3A3-204ENST00000462258 DPTQ07507 201 aa10.15□□□□□ -0.78
SF3A3-204ENST00000462258 GALNT3Q14435 633 aa10.15□□□□□ -0.78
SF3A3-204ENST00000462258 SPOCD1Q6ZMY3 1216 aa10.15□□□□□ -0.78
SF3A3-204ENST00000462258 RBM44Q6ZP01 1051 aaKnown RBP10.15□□□□□ -0.78
SF3A3-204ENST00000462258 RFLNAQ6ZTI6 216 aa10.15□□□□□ -0.78
SF3A3-204ENST00000462258 ZNF765Q7L2R6 523 aa10.15□□□□□ -0.78
SF3A3-204ENST00000462258 TECPR1Q7Z6L1 1165 aa10.15□□□□□ -0.78
SF3A3-204ENST00000462258 TAF8Q7Z7C8 310 aa10.15□□□□□ -0.78
SF3A3-204ENST00000462258 WDR48Q8TAF3 677 aa10.15□□□□□ -0.78
SF3A3-204ENST00000462258 CCDC74AQ96AQ1 378 aa10.15□□□□□ -0.78
SF3A3-204ENST00000462258 AP2M1Q96CW1 435 aa10.15□□□□□ -0.78
SF3A3-204ENST00000462258 PANX2Q96RD6 677 aa10.15□□□□□ -0.78
SF3A3-204ENST00000462258 LYSMD1Q96S90 227 aa10.15□□□□□ -0.78
SF3A3-204ENST00000462258 FRMD8Q9BZ67 464 aaPredicted RBP10.15□□□□□ -0.78
SF3A3-204ENST00000462258 TMEM168Q9H0V1 697 aa10.15□□□□□ -0.78
SF3A3-204ENST00000462258 PADI4Q9UM07 663 aa10.15□□□□□ -0.78
SF3A3-204ENST00000462258 RPL26L1Q9UNX3 145 aaKnown RBP10.15□□□□□ -0.78
SF3A3-204ENST00000462258 TFR2Q9UP52 801 aa10.15□□□□□ -0.78
SF3A3-204ENST00000462258 PCDHA13Q9Y5I0 950 aa10.15□□□□□ -0.78
SF3A3-204ENST00000462258 ALG6Q9Y672 507 aa10.15□□□□□ -0.78
SF3A3-204ENST00000462258 ARHGEF17Q96PE2 2063 aaPredicted RBP10.14□□□□□ -0.79
SF3A3-204ENST00000462258 C1orf232A0A0U1RR37 186 aa10.14□□□□□ -0.79
SF3A3-204ENST00000462258 TLX3O43711 291 aaPredicted RBP10.14□□□□□ -0.79
SF3A3-204ENST00000462258 USP12O75317 370 aa10.14□□□□□ -0.79
SF3A3-204ENST00000462258 NDUFA10O95299 355 aa10.14□□□□□ -0.79
SF3A3-204ENST00000462258 PRLP01236 227 aa10.14□□□□□ -0.79
SF3A3-204ENST00000462258 CEACAM5P06731 702 aa10.14□□□□□ -0.79
SF3A3-204ENST00000462258 PYGLP06737 847 aa10.14□□□□□ -0.79
SF3A3-204ENST00000462258 PECAM1P16284 738 aaPredicted RBP10.14□□□□□ -0.79
SF3A3-204ENST00000462258 FECHP22830 423 aa10.14□□□□□ -0.79
SF3A3-204ENST00000462258 GNPDA1P46926 289 aa10.14□□□□□ -0.79
SF3A3-204ENST00000462258 PDX1P52945 283 aa10.14□□□□□ -0.79
SF3A3-204ENST00000462258 GABREP78334 506 aa10.14□□□□□ -0.79
SF3A3-204ENST00000462258 PTSQ03393 145 aa10.14□□□□□ -0.79
SF3A3-204ENST00000462258 ILF3Q12906 894 aaKnown RBP eCLIP10.14□□□□□ -0.79
SF3A3-204ENST00000462258 SPIDRQ14159 915 aa10.14□□□□□ -0.79
SF3A3-204ENST00000462258 TFDP2Q14188 446 aa10.14□□□□□ -0.79
SF3A3-204ENST00000462258 TAZQ16635 292 aa10.14□□□□□ -0.79
SF3A3-204ENST00000462258 QPCTQ16769 361 aa10.14□□□□□ -0.79
SF3A3-204ENST00000462258 KAZNQ674X7 775 aa10.14□□□□□ -0.79
SF3A3-204ENST00000462258 DOK6Q6PKX4 331 aa10.14□□□□□ -0.79
SF3A3-204ENST00000462258 ADAMTSL4Q6UY14 1074 aa10.14□□□□□ -0.79
SF3A3-204ENST00000462258 CCDC50Q8IVM0 306 aa10.14□□□□□ -0.79
SF3A3-204ENST00000462258 KATNAL2Q8IYT4 538 aa10.14□□□□□ -0.79
SF3A3-204ENST00000462258 CBARPQ8N350 705 aaPredicted RBP10.14□□□□□ -0.79
SF3A3-204ENST00000462258 CNTD1Q8N815 330 aa10.14□□□□□ -0.79
SF3A3-204ENST00000462258 GPR156Q8NFN8 814 aa10.14□□□□□ -0.79
SF3A3-204ENST00000462258 OR6C4Q8NGE1 309 aa10.14□□□□□ -0.79
SF3A3-204ENST00000462258 CCL4L1Q8NHW4 92 aa10.14□□□□□ -0.79
SF3A3-204ENST00000462258 SCAMP4Q969E2 229 aa10.14□□□□□ -0.79
SF3A3-204ENST00000462258 IMP4Q96G21 291 aaKnown RBP10.14□□□□□ -0.79
SF3A3-204ENST00000462258 AGAP3Q96P47 875 aa10.14□□□□□ -0.79
SF3A3-204ENST00000462258 DCBLD2Q96PD2 775 aa10.14□□□□□ -0.79
SF3A3-204ENST00000462258 ADGRE3Q9BY15 652 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms