RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 FUCA1P04066 466 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 CEACAM5P06731 702 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 PDHA1P08559 390 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 GLB1P16278 677 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 MX2P20592 715 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 KDELR1P24390 212 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 ETV3P41162 512 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 ARHGAP25P42331 645 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 SSR1P43307 286 aaKnown RBP9.15□□□□□ -0.94
BRCA1-207ENST00000461798 PDX1P52945 283 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 PCBP4P57723 403 aaKnown RBP9.15□□□□□ -0.94
BRCA1-207ENST00000461798 RPL26P61254 145 aaKnown RBP9.15□□□□□ -0.94
BRCA1-207ENST00000461798 TLE3Q04726 772 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 SPIDRQ14159 915 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 CERCAMQ5T4B2 595 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 Q6ZVL8 140 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 USP45Q70EL2 814 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 ZNF765Q7L2R6 523 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 TAF8Q7Z7C8 310 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 VSIG1Q86XK7 387 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 CPNE8Q86YQ8 564 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 VSTM4Q8IW00 320 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 SPACA3Q8IXA5 215 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 LSM14AQ8ND56 463 aaKnown RBP9.15□□□□□ -0.94
BRCA1-207ENST00000461798 WDR36Q8NI36 951 aaKnown RBP9.15□□□□□ -0.94
BRCA1-207ENST00000461798 ARRDC2Q8TBH0 407 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 GPBAR1Q8TDU6 330 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 PDCD6IPQ8WUM4 868 aaKnown RBP9.15□□□□□ -0.94
BRCA1-207ENST00000461798 NUS1Q96E22 293 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 LIN37Q96GY3 246 aaPredicted RBP9.15□□□□□ -0.94
BRCA1-207ENST00000461798 CRELD1Q96HD1 420 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 RNF157Q96PX1 679 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 LYSMD1Q96S90 227 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 PACSIN1Q9BY11 444 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 FRMD8Q9BZ67 464 aaPredicted RBP9.15□□□□□ -0.94
BRCA1-207ENST00000461798 DPH1Q9BZG8 443 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 TMEM168Q9H0V1 697 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 CYP4F12Q9HCS2 524 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 MRPL40Q9NQ50 206 aaKnown RBP9.15□□□□□ -0.94
BRCA1-207ENST00000461798 PHPT1Q9NRX4 125 aaPredicted RBP9.15□□□□□ -0.94
BRCA1-207ENST00000461798 THSD1Q9NS62 852 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 HAUS2Q9NVX0 235 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 RBM22Q9NW64 420 aaKnown RBP eCLIP9.15□□□□□ -0.94
BRCA1-207ENST00000461798 RABGEF1Q9UJ41 708 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 RPL26L1Q9UNX3 145 aaKnown RBP9.15□□□□□ -0.94
BRCA1-207ENST00000461798 SLC17A4Q9Y2C5 497 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 CELSR3Q9NYQ7 3312 aa9.14□□□□□ -0.95
BRCA1-207ENST00000461798 CCDC187A0A096LP49 1063 aa9.14□□□□□ -0.95
BRCA1-207ENST00000461798 PRSS38A1L453 326 aa9.14□□□□□ -0.95
BRCA1-207ENST00000461798 CDRT15L2A8MXV6 281 aa9.14□□□□□ -0.95
BRCA1-207ENST00000461798 CASC3O15234 703 aaKnown RBP9.14□□□□□ -0.95
BRCA1-207ENST00000461798 NUDT21O43809 227 aaKnown RBP9.14□□□□□ -0.95
BRCA1-207ENST00000461798 PYGLP06737 847 aa9.14□□□□□ -0.95
BRCA1-207ENST00000461798 CCNB1P14635 433 aa9.14□□□□□ -0.95
BRCA1-207ENST00000461798 ZNF30P17039 623 aa9.14□□□□□ -0.95
BRCA1-207ENST00000461798 RBMS1P29558 406 aaKnown RBP9.14□□□□□ -0.95
BRCA1-207ENST00000461798 CCKBRP32239 447 aa9.14□□□□□ -0.95
BRCA1-207ENST00000461798 CCL7P80098 99 aa9.14□□□□□ -0.95
BRCA1-207ENST00000461798 CDK3Q00526 305 aa9.14□□□□□ -0.95
BRCA1-207ENST00000461798 PTSQ03393 145 aa9.14□□□□□ -0.95
BRCA1-207ENST00000461798 GBE1Q04446 702 aa9.14□□□□□ -0.95
BRCA1-207ENST00000461798 NIPAL4Q0D2K0 466 aa9.14□□□□□ -0.95
BRCA1-207ENST00000461798 CCDC173Q0VFZ6 552 aa9.14□□□□□ -0.95
BRCA1-207ENST00000461798 SLC10A2Q12908 348 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-207ENST00000461798 EIF3IQ13347 325 aaKnown RBP9.14□□□□□ -0.95
BRCA1-207ENST00000461798 ARHGEF7Q14155 803 aa9.14□□□□□ -0.95
BRCA1-207ENST00000461798 HLTFQ14527 1009 aaKnown RBP eCLIP9.14□□□□□ -0.95
BRCA1-207ENST00000461798 CLPPQ16740 277 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-207ENST00000461798 C14orf28Q4W4Y0 310 aa9.14□□□□□ -0.95
BRCA1-207ENST00000461798 LRRC38Q5VT99 294 aa9.14□□□□□ -0.95
BRCA1-207ENST00000461798 CRTC1Q6UUV9 634 aa9.14□□□□□ -0.95
BRCA1-207ENST00000461798 ADAMTSL4Q6UY14 1074 aa9.14□□□□□ -0.95
BRCA1-207ENST00000461798 CLEC14AQ86T13 490 aa9.14□□□□□ -0.95
BRCA1-207ENST00000461798 TSPAN33Q86UF1 283 aa9.14□□□□□ -0.95
BRCA1-207ENST00000461798 HEATR4Q86WZ0 1026 aa9.14□□□□□ -0.95
BRCA1-207ENST00000461798 NRROSQ86YC3 692 aa9.14□□□□□ -0.95
BRCA1-207ENST00000461798 NRSN1Q8IZ57 195 aa9.14□□□□□ -0.95
BRCA1-207ENST00000461798 FAM46DQ8NEK8 389 aa9.14□□□□□ -0.95
BRCA1-207ENST00000461798 SLC35G2Q8TBE7 412 aa9.14□□□□□ -0.95
BRCA1-207ENST00000461798 SNRNP27Q8WVK2 155 aaKnown RBP9.14□□□□□ -0.95
BRCA1-207ENST00000461798 RAPGEF5Q92565 580 aa9.14□□□□□ -0.95
BRCA1-207ENST00000461798 CCDC74AQ96AQ1 378 aa9.14□□□□□ -0.95
BRCA1-207ENST00000461798 HDAC11Q96DB2 347 aa9.14□□□□□ -0.95
BRCA1-207ENST00000461798 BBC3Q96PG8 261 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-207ENST00000461798 GFM1Q96RP9 751 aaKnown RBP9.14□□□□□ -0.95
BRCA1-207ENST00000461798 UBL7Q96S82 380 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-207ENST00000461798 CHP1Q99653 195 aa9.14□□□□□ -0.95
BRCA1-207ENST00000461798 TDRD1Q9BXT4 1180 aaKnown RBP9.14□□□□□ -0.95
BRCA1-207ENST00000461798 ABCG8Q9H221 673 aa9.14□□□□□ -0.95
BRCA1-207ENST00000461798 LRRN3Q9H3W5 708 aa9.14□□□□□ -0.95
BRCA1-207ENST00000461798 ZNHIT6Q9NWK9 470 aaKnown RBP9.14□□□□□ -0.95
BRCA1-207ENST00000461798 DTLQ9NZJ0 730 aa9.14□□□□□ -0.95
BRCA1-207ENST00000461798 SIRPGQ9P1W8 387 aa9.14□□□□□ -0.95
BRCA1-207ENST00000461798 DNPEPQ9ULA0 475 aa9.14□□□□□ -0.95
BRCA1-207ENST00000461798 SATB2Q9UPW6 733 aa9.14□□□□□ -0.95
BRCA1-207ENST00000461798 RP1P56715 2156 aa9.14□□□□□ -0.95
BRCA1-207ENST00000461798 RGSL1A5PLK6 1076 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 C3orf70A6NLC5 250 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-207ENST00000461798 D6RAR5 112 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 AKR1B10O60218 316 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms