RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 AVILO75366 819 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 RBMXL2O75526 392 aaKnown RBP3.22□□□□□ -1.89
VCL-203ENST00000461383 IFNA2P01563 188 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 AFPP02771 609 aaKnown RBP3.22□□□□□ -1.89
VCL-203ENST00000461383 CYP1A2P05177 515 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 TUBBP07437 444 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 SELLP14151 372 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 FBLP22087 321 aaKnown RBP3.22□□□□□ -1.89
VCL-203ENST00000461383 GPTP24298 496 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 EEF1DP29692 281 aaKnown RBP3.22□□□□□ -1.89
VCL-203ENST00000461383 HSD17B4P51659 736 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 P2RX3P56373 397 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 TAS2R40P59535 323 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 GRSF1Q12849 480 aaKnown RBP eCLIP3.22□□□□□ -1.89
VCL-203ENST00000461383 TNFAIP1Q13829 316 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 KRT33BQ14525 404 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 PTGR1Q14914 329 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 PCLAFQ15004 111 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 PLCB4Q15147 1175 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 PNLIPRP3Q17RR3 467 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 C2orf68Q2NKX9 166 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 WASHC2DQ5SRD0 308 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 LRIF1Q5T3J3 769 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 C10orf25Q5T742 122 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 DCAF12L2Q5VW00 463 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 ARMC3Q5W041 872 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 GGNBP1Q5YKI7 109 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 NUGGCQ68CJ6 796 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 HIST2H2BCQ6DN03 193 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 HIST2H2BDQ6DRA6 164 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 METTL2BQ6P1Q9 378 aaKnown RBP3.22□□□□□ -1.89
VCL-203ENST00000461383 PQLC2Q6ZP29 291 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 Q6ZTK2 550 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 SHFQ7M4L6 423 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 ARID3BQ8IVW6 561 aaPredicted RBP3.22□□□□□ -1.89
VCL-203ENST00000461383 FAM9BQ8IZU0 186 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 NANOGP1Q8N7R0 232 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 IL17RCQ8NAC3 791 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 POGLUT1Q8NBL1 392 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 MPLKIPQ8TAP9 179 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 ARRDC2Q8TBH0 407 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 GPT2Q8TD30 523 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 IGSF8Q969P0 613 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 ZNF653Q96CK0 615 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 METTL2AQ96IZ6 378 aaKnown RBP3.22□□□□□ -1.89
VCL-203ENST00000461383 SPATA17Q96L03 361 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 NLRP4Q96MN2 994 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 ZMAT2Q96NC0 199 aaKnown RBP3.22□□□□□ -1.89
VCL-203ENST00000461383 ABHD1Q96SE0 405 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 MRPL1Q9BYD6 325 aaKnown RBP3.22□□□□□ -1.89
VCL-203ENST00000461383 KRCC1Q9NPI7 259 aaPredicted RBP3.22□□□□□ -1.89
VCL-203ENST00000461383 HINT3Q9NQE9 182 aaKnown RBP3.22□□□□□ -1.89
VCL-203ENST00000461383 DDX4Q9NQI0 724 aaKnown RBP3.22□□□□□ -1.89
VCL-203ENST00000461383 TUBA8Q9NY65 449 aaPredicted RBP3.22□□□□□ -1.89
VCL-203ENST00000461383 PSD3Q9NYI0 1048 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 OR6C3Q9NZP0 311 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 BCCIPQ9P287 314 aaKnown RBP eCLIP3.22□□□□□ -1.89
VCL-203ENST00000461383 MARCH4Q9P2E8 410 aaPredicted RBP3.22□□□□□ -1.89
VCL-203ENST00000461383 FBXW11Q9UKB1 542 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 NFE2L3Q9Y4A8 694 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.22□□□□□ -1.89
VCL-203ENST00000461383 HS3ST3B1Q9Y662 390 aa3.22□□□□□ -1.89
VCL-203ENST00000461383 ZNF644Q9H582 1327 aaPredicted RBP3.21□□□□□ -1.89
VCL-203ENST00000461383 WIPF3A6NGB9 483 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 ZNF814B7Z6K7 855 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 H0YGN5 161 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 H7C0S8 307 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 ATP2A1O14983 1001 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 IPO8O15397 1037 aaKnown RBP3.21□□□□□ -1.9
VCL-203ENST00000461383 CNOT3O75175 753 aaKnown RBP3.21□□□□□ -1.9
VCL-203ENST00000461383 TBCAO75347 108 aaKnown RBP3.21□□□□□ -1.9
VCL-203ENST00000461383 DAB1O75553 588 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 GGPS1O95749 300 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 FGBP02675 491 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 G6PDP11413 515 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 GJA1P17302 382 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 PIGAP37287 484 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 KCNJ4P48050 445 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 ME1P48163 572 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 METAP2P50579 478 aaKnown RBP eCLIP3.21□□□□□ -1.9
VCL-203ENST00000461383 PLCD1P51178 756 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 PNLIPRP2P54317 469 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 TMF1P82094 1093 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 ST3GAL1Q11201 340 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 RBMS2Q15434 407 aaKnown RBP3.21□□□□□ -1.9
VCL-203ENST00000461383 DUSP6Q16828 381 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 PRTGQ2VWP7 1150 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 C9orf152Q5JTZ5 239 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 C1orf141Q5JVX7 400 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 PXDC1Q5TGL8 231 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 LRCH2Q5VUJ6 765 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 OTUD1Q5VV17 481 aaPredicted RBP3.21□□□□□ -1.9
VCL-203ENST00000461383 PMS2CLQ68D20 193 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 KRT80Q6KB66 452 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 RPUSD3Q6P087 351 aaKnown RBP3.21□□□□□ -1.9
VCL-203ENST00000461383 CFAP77Q6ZQR2 320 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 CLEC17AQ6ZS10 378 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 DPPA4Q7L190 304 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 CACNA2D4Q7Z3S7 1137 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 KRT77Q7Z794 578 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms