RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 WDR87Q6ZQQ6 2873 aa4.98□□□□□ -1.61
ATPAF1-203ENST00000460928 DMXL1Q9Y485 3027 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 TRIOO75962 3097 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 RIF1Q5UIP0 2472 aaKnown RBP4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 TCRBV7S2A1N4TA0A589 114 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 MED19A0JLT2 244 aaPredicted RBP4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 ZNF233A6NK53 670 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 PODXLO00592 558 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 AREL1O15033 823 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 KIAA0391O15091 583 aaKnown RBP4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 INPPL1O15357 1258 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 SLC43A1O75387 559 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 VNN1O95497 513 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 ADCY5O95622 1261 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 TUBBP07437 444 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 KRT19P08727 400 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 OR4Q2P0C623 313 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 KCNE1P15382 129 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 ZFXP17010 805 aaPredicted RBP4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 TNNI1P19237 187 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 CCNE1P24864 410 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 TKTP29401 623 aaKnown RBP4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 LMAN1P49257 510 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 GZMKP49863 264 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 CLNS1AP54105 237 aaKnown RBP4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 MYL6P60660 151 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 IFFO1Q0D2I5 559 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 GALNT1Q10472 559 aaPredicted RBP4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 LRMPQ12912 555 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 DYNC1I2Q13409 638 aaKnown RBP4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 RAB32Q13637 225 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 ALCAMQ13740 583 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 SMC1AQ14683 1233 aaKnown RBP4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 TMEM132DQ14C87 1099 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 ZACNQ401N2 412 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 FAM171A1Q5VUB5 890 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 C9orf57Q5W0N0 161 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 SLC30A9Q6PML9 568 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 SEM1Q6ZVN7 128 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 RNF44Q7L0R7 432 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 YTHDF3Q7Z739 585 aaKnown RBP4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 CEP57Q86XR8 500 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 AOPEPQ8N6M6 819 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 TEX19Q8NA77 164 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 VN1R2Q8NFZ6 395 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 B4GALNT2Q8NHY0 566 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 ST8SIA2Q92186 375 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 SEMA4DQ92854 862 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 DHTKD1Q96HY7 919 aaPredicted RBP4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 IGSF21Q96ID5 467 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 ZNF558Q96NG5 402 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 ANKRD27Q96NW4 1050 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 TGS1Q96RS0 853 aaKnown RBP4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 HEPHQ9BQS7 1158 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 FUCA2Q9BTY2 467 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 MRI1Q9BV20 369 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 PACSIN1Q9BY11 444 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 ENKD1Q9H0I2 346 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 HSD3B7Q9H2F3 369 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 MMADHCQ9H3L0 296 aaPredicted RBP4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 RMND1Q9NWS8 449 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 DPP3Q9NY33 737 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 SLC39A10Q9ULF5 831 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 AGAP1Q9UPQ3 857 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 TRAF3IP3Q9Y228 551 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 UBE4BO95155 1302 aa4.97□□□□□ -1.61
ATPAF1-203ENST00000460928 PLXNA3P51805 1871 aa4.96□□□□□ -1.61
ATPAF1-203ENST00000460928 USP24Q9UPU5 2620 aa4.96□□□□□ -1.61
ATPAF1-203ENST00000460928 FAM186AA6NE01 2351 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 ENO4A6NNW6 628 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 CXorf49A8MYA2 514 aaPredicted RBP4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 H3BNC9 293 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 PYCARD-AS1I3L0S3 204 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 PSMA7O14818 248 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 CALUO43852 315 aaPredicted RBP4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 FAM20BO75063 409 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 TADA2AO75478 443 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 B3GAT3O94766 335 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 PENKP01210 267 aaPredicted RBP4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 MYL4P12829 197 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 ATP1A3P13637 1013 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 FBLP22087 321 aaKnown RBP4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 ACAT1P24752 427 aaKnown RBP4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 ARHGAP25P42331 645 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 MAPK9P45984 424 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 ALDH7A1P49419 539 aaKnown RBP4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 KLK7P49862 253 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 CDH8P55286 799 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 ARPP19P56211 112 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 MXRA7P84157 204 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 BFSP1Q12934 665 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 EIF2B5Q13144 721 aaKnown RBP4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 PSMD6Q15008 389 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 UPP1Q16831 310 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 CCDC40Q4G0X9 1142 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 CBWD6Q4V339 395 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 TCEAL5Q5H9L2 206 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 CBWD3Q5JTY5 395 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 CBWD5Q5RIA9 395 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 SPATA1Q5VX52 437 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms