RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 AP1S1P61966 158 aa13.71□□□□□ -0.21
SCAMP4-206ENST00000460767 CCZ1BP86790 482 aa13.71□□□□□ -0.21
SCAMP4-206ENST00000460767 CCZ1P86791 482 aaPredicted RBP13.71□□□□□ -0.21
SCAMP4-206ENST00000460767 TLE1Q04724 770 aa13.71□□□□□ -0.21
SCAMP4-206ENST00000460767 PPIDQ08752 370 aaKnown RBP13.71□□□□□ -0.21
SCAMP4-206ENST00000460767 EIF2B5Q13144 721 aaKnown RBP13.71□□□□□ -0.21
SCAMP4-206ENST00000460767 PDE1CQ14123 709 aaPredicted RBP13.71□□□□□ -0.21
SCAMP4-206ENST00000460767 UBAP2LQ14157 1087 aaKnown RBP13.71□□□□□ -0.21
SCAMP4-206ENST00000460767 PPP2R5EQ16537 467 aa13.71□□□□□ -0.21
SCAMP4-206ENST00000460767 RALGPS1Q5JS13 557 aa13.71□□□□□ -0.21
SCAMP4-206ENST00000460767 RAB11FIP2Q7L804 512 aa13.71□□□□□ -0.21
SCAMP4-206ENST00000460767 SRLQ86TD4 932 aa13.71□□□□□ -0.21
SCAMP4-206ENST00000460767 ATPAF2Q8N5M1 289 aa13.71□□□□□ -0.21
SCAMP4-206ENST00000460767 EXD1Q8NHP7 514 aa13.71□□□□□ -0.21
SCAMP4-206ENST00000460767 TMEM159Q96B96 161 aa13.71□□□□□ -0.21
SCAMP4-206ENST00000460767 DESI2Q9BSY9 194 aa13.71□□□□□ -0.21
SCAMP4-206ENST00000460767 C1QTNF2Q9BXJ5 285 aa13.71□□□□□ -0.21
SCAMP4-206ENST00000460767 SUV39H2Q9H5I1 410 aa13.71□□□□□ -0.21
SCAMP4-206ENST00000460767 GRPEL1Q9HAV7 217 aa13.71□□□□□ -0.21
SCAMP4-206ENST00000460767 TRIM10Q9UDY6 481 aa13.71□□□□□ -0.21
SCAMP4-206ENST00000460767 APOBEC3BQ9UH17 382 aaKnown RBP13.71□□□□□ -0.21
SCAMP4-206ENST00000460767 AMACRQ9UHK6 382 aa13.71□□□□□ -0.21
SCAMP4-206ENST00000460767 PCDHGA4Q9Y5G9 962 aa13.71□□□□□ -0.21
SCAMP4-206ENST00000460767 PCDHA3Q9Y5H8 950 aa13.71□□□□□ -0.21
SCAMP4-206ENST00000460767 AHCTF1Q8WYP5 2266 aa13.7□□□□□ -0.22
SCAMP4-206ENST00000460767 hCG_1818297A0A087WSY0 165 aa13.7□□□□□ -0.22
SCAMP4-206ENST00000460767 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.7□□□□□ -0.22
SCAMP4-206ENST00000460767 D6RAR5 112 aa13.7□□□□□ -0.22
SCAMP4-206ENST00000460767 FPGTO14772 594 aa13.7□□□□□ -0.22
SCAMP4-206ENST00000460767 RAD51BO15315 384 aa13.7□□□□□ -0.22
SCAMP4-206ENST00000460767 SPOPO43791 374 aa13.7□□□□□ -0.22
SCAMP4-206ENST00000460767 IPO7O95373 1038 aaKnown RBP13.7□□□□□ -0.22
SCAMP4-206ENST00000460767 PIGNO95427 931 aa13.7□□□□□ -0.22
SCAMP4-206ENST00000460767 FAM87AP0C7U9 286 aa13.7□□□□□ -0.22
SCAMP4-206ENST00000460767 CTNNA2P26232 953 aa13.7□□□□□ -0.22
SCAMP4-206ENST00000460767 CD82P27701 267 aa13.7□□□□□ -0.22
SCAMP4-206ENST00000460767 NOP2P46087 812 aaKnown RBP13.7□□□□□ -0.22
SCAMP4-206ENST00000460767 NFKB2Q00653 900 aa13.7□□□□□ -0.22
SCAMP4-206ENST00000460767 PTK2BQ14289 1009 aa13.7□□□□□ -0.22
SCAMP4-206ENST00000460767 AGERQ15109 404 aa13.7□□□□□ -0.22
SCAMP4-206ENST00000460767 IFI16Q16666 785 aaKnown RBP13.7□□□□□ -0.22
SCAMP4-206ENST00000460767 CRTC1Q6UUV9 634 aa13.7□□□□□ -0.22
SCAMP4-206ENST00000460767 NT5DC3Q86UY8 548 aa13.7□□□□□ -0.22
SCAMP4-206ENST00000460767 ZNF354CQ86Y25 554 aa13.7□□□□□ -0.22
SCAMP4-206ENST00000460767 CAMK1DQ8IU85 385 aa13.7□□□□□ -0.22
SCAMP4-206ENST00000460767 LRRC8AQ8IWT6 810 aa13.7□□□□□ -0.22
SCAMP4-206ENST00000460767 SDR16C5Q8N3Y7 309 aa13.7□□□□□ -0.22
SCAMP4-206ENST00000460767 FBXO39Q8N4B4 442 aa13.7□□□□□ -0.22
SCAMP4-206ENST00000460767 LMX1AQ8TE12 382 aa13.7□□□□□ -0.22
SCAMP4-206ENST00000460767 FEM1CQ96JP0 617 aa13.7□□□□□ -0.22
SCAMP4-206ENST00000460767 TMEM74Q96NL1 305 aa13.7□□□□□ -0.22
SCAMP4-206ENST00000460767 NUDCD1Q96RS6 583 aa13.7□□□□□ -0.22
SCAMP4-206ENST00000460767 HERPUD2Q9BSE4 406 aa13.7□□□□□ -0.22
SCAMP4-206ENST00000460767 LRRC61Q9BV99 259 aa13.7□□□□□ -0.22
SCAMP4-206ENST00000460767 STRADBQ9C0K7 418 aa13.7□□□□□ -0.22
SCAMP4-206ENST00000460767 SEPT10Q9P0V9 454 aa13.7□□□□□ -0.22
SCAMP4-206ENST00000460767 GGT7Q9UJ14 662 aa13.7□□□□□ -0.22
SCAMP4-206ENST00000460767 EFR3BQ9Y2G0 817 aa13.7□□□□□ -0.22
SCAMP4-206ENST00000460767 TSPAN6O43657 245 aa13.69□□□□□ -0.22
SCAMP4-206ENST00000460767 FZD6O60353 706 aa13.69□□□□□ -0.22
SCAMP4-206ENST00000460767 SOCS5O75159 536 aa13.69□□□□□ -0.22
SCAMP4-206ENST00000460767 MAP3K6O95382 1288 aa13.69□□□□□ -0.22
SCAMP4-206ENST00000460767 PAK4O96013 591 aaPredicted RBP13.69□□□□□ -0.22
SCAMP4-206ENST00000460767 KRT1P04264 644 aa13.69□□□□□ -0.22
SCAMP4-206ENST00000460767 MX2P20592 715 aa13.69□□□□□ -0.22
SCAMP4-206ENST00000460767 RENBPP51606 427 aa13.69□□□□□ -0.22
SCAMP4-206ENST00000460767 IFI35P80217 286 aaPredicted RBP13.69□□□□□ -0.22
SCAMP4-206ENST00000460767 RAD51Q06609 339 aa13.69□□□□□ -0.22
SCAMP4-206ENST00000460767 TBR1Q16650 682 aa13.69□□□□□ -0.22
SCAMP4-206ENST00000460767 UGP2Q16851 508 aa13.69□□□□□ -0.22
SCAMP4-206ENST00000460767 TPRG1LQ5T0D9 272 aa13.69□□□□□ -0.22
SCAMP4-206ENST00000460767 ESRP1Q6NXG1 681 aaKnown RBP13.69□□□□□ -0.22
SCAMP4-206ENST00000460767 FOXR1Q6PIV2 292 aa13.69□□□□□ -0.22
SCAMP4-206ENST00000460767 BRAT1Q6PJG6 821 aa13.69□□□□□ -0.22
SCAMP4-206ENST00000460767 LVRNQ6Q4G3 990 aa13.69□□□□□ -0.22
SCAMP4-206ENST00000460767 SPOCD1Q6ZMY3 1216 aa13.69□□□□□ -0.22
SCAMP4-206ENST00000460767 DAAM2Q86T65 1068 aa13.69□□□□□ -0.22
SCAMP4-206ENST00000460767 DTX1Q86Y01 620 aa13.69□□□□□ -0.22
SCAMP4-206ENST00000460767 CBARPQ8N350 705 aaPredicted RBP13.69□□□□□ -0.22
SCAMP4-206ENST00000460767 CNTD1Q8N815 330 aa13.69□□□□□ -0.22
SCAMP4-206ENST00000460767 ARL10Q8N8L6 244 aa13.69□□□□□ -0.22
SCAMP4-206ENST00000460767 CCDC112Q8NEF3 446 aa13.69□□□□□ -0.22
SCAMP4-206ENST00000460767 ARRDC2Q8TBH0 407 aa13.69□□□□□ -0.22
SCAMP4-206ENST00000460767 ALG3Q92685 438 aa13.69□□□□□ -0.22
SCAMP4-206ENST00000460767 TADA1Q96BN2 335 aa13.69□□□□□ -0.22
SCAMP4-206ENST00000460767 CINPQ9BW66 212 aaPredicted RBP13.69□□□□□ -0.22
SCAMP4-206ENST00000460767 NOD2Q9HC29 1040 aa13.69□□□□□ -0.22
SCAMP4-206ENST00000460767 TUBD1Q9UJT1 453 aa13.69□□□□□ -0.22
SCAMP4-206ENST00000460767 PADI4Q9UM07 663 aa13.69□□□□□ -0.22
SCAMP4-206ENST00000460767 ATP8A1Q9Y2Q0 1164 aa13.69□□□□□ -0.22
SCAMP4-206ENST00000460767 PPIL1Q9Y3C6 166 aa13.69□□□□□ -0.22
SCAMP4-206ENST00000460767 GCATO75600 419 aa13.68□□□□□ -0.22
SCAMP4-206ENST00000460767 ZRANB2O95218 330 aaKnown RBP eCLIP13.68□□□□□ -0.22
SCAMP4-206ENST00000460767 ANXA6P08133 673 aa13.68□□□□□ -0.22
SCAMP4-206ENST00000460767 PECAM1P16284 738 aaPredicted RBP13.68□□□□□ -0.22
SCAMP4-206ENST00000460767 ZFXP17010 805 aaPredicted RBP13.68□□□□□ -0.22
SCAMP4-206ENST00000460767 GM2AP17900 193 aa13.68□□□□□ -0.22
SCAMP4-206ENST00000460767 MMP12P39900 470 aa13.68□□□□□ -0.22
SCAMP4-206ENST00000460767 MMP13P45452 471 aa13.68□□□□□ -0.22
SCAMP4-206ENST00000460767 NR2C2P49116 596 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms