RNA–Protein interactions for RNA: ENST00000460593.1

CPSF3-202, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 1 (best) BASIC

Gene CPSF3, Length 3,157 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-202ENST00000460593 ANK1P16157 1881 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 A0A1W2PQ67 120 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 MSI1O43347 362 aaKnown RBP11.71□□□□□ -0.53
CPSF3-202ENST00000460593 CAPN15O75808 1086 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 ARIH2O95376 493 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 S100BP04271 92 aaPredicted RBP11.71□□□□□ -0.53
CPSF3-202ENST00000460593 LINC00032P0C843 101 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 SLC12A2P55011 1212 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 ATP6V0D1P61421 351 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 FRG1Q14331 258 aaKnown RBP11.71□□□□□ -0.53
CPSF3-202ENST00000460593 CATSPEREQ5SY80 951 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 KCTD11Q693B1 232 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 LARP4Q71RC2 724 aaKnown RBP eCLIP11.71□□□□□ -0.532e-6■■■■□ 23.7
CPSF3-202ENST00000460593 SLC2A14Q8TDB8 520 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 PPP1R13LQ8WUF5 828 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 COPS5Q92905 334 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 FKBP10Q96AY3 582 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 C18orf25Q96B23 403 aaPredicted RBP11.71□□□□□ -0.53
CPSF3-202ENST00000460593 CHID1Q9BWS9 393 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 FZD8Q9H461 694 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 PALMDQ9NP74 551 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 SCHIP1Q9P0W5 487 aaPredicted RBP11.71□□□□□ -0.53
CPSF3-202ENST00000460593 SLCO3A1Q9UIG8 710 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 UTS2RQ9UKP6 389 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 GINS2Q9Y248 185 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 VWA7Q9Y334 891 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 PCDHGA8Q9Y5G5 932 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 AGRPO00253 132 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 PARNO95453 639 aaKnown RBP11.71□□□□□ -0.53
CPSF3-202ENST00000460593 LDLRP01130 860 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 VTNP04004 478 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 TGM1P22735 817 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 PIGAP37287 484 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 IFITM2Q01629 132 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 LIPEQ05469 1076 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 ZNF846Q147U1 533 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 CTU2Q2VPK5 515 aaKnown RBP11.71□□□□□ -0.53
CPSF3-202ENST00000460593 USP51Q70EK9 711 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 CATSPER4Q7RTX7 472 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 PIM3Q86V86 326 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 ANKRD13BQ86YJ7 626 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 TTC16Q8NEE8 873 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 LRRC58Q96CX6 371 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 C19orf60Q96EN9 201 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 CAMKK2Q96RR4 588 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 MRPL57Q9BQC6 102 aaKnown RBP11.71□□□□□ -0.53
CPSF3-202ENST00000460593 VTA1Q9NP79 307 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 TMEM9Q9P0T7 183 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 SEPT3Q9UH03 358 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 INVSQ9Y283 1065 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 ATP11BQ9Y2G3 1177 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 PCDHB3Q9Y5E6 796 aa11.71□□□□□ -0.53
CPSF3-202ENST00000460593 CITO14578 2027 aa11.71□□□□□ -0.54
CPSF3-202ENST00000460593 EVPLQ92817 2033 aa11.71□□□□□ -0.54
CPSF3-202ENST00000460593 AQP12BA6NM10 295 aa11.71□□□□□ -0.54
CPSF3-202ENST00000460593 PIP5K1BO14986 540 aa11.71□□□□□ -0.54
CPSF3-202ENST00000460593 IPO13O94829 963 aaKnown RBP11.71□□□□□ -0.54
CPSF3-202ENST00000460593 NADKO95544 446 aaPredicted RBP11.71□□□□□ -0.54
CPSF3-202ENST00000460593 ITGB6P18564 788 aa11.71□□□□□ -0.54
CPSF3-202ENST00000460593 HK2P52789 917 aa11.71□□□□□ -0.54
CPSF3-202ENST00000460593 DGCR6Q14129 220 aa11.71□□□□□ -0.54
CPSF3-202ENST00000460593 PAGE3Q5JUK9 113 aa11.71□□□□□ -0.54
CPSF3-202ENST00000460593 NEPROQ6NW34 567 aa11.71□□□□□ -0.54
CPSF3-202ENST00000460593 KRT27Q7Z3Y8 459 aa11.71□□□□□ -0.54
CPSF3-202ENST00000460593 AQP12AQ8IXF9 295 aa11.71□□□□□ -0.54
CPSF3-202ENST00000460593 ZCCHC7Q8N3Z6 543 aaKnown RBP11.71□□□□□ -0.54
CPSF3-202ENST00000460593 REPS2Q8NFH8 660 aa11.71□□□□□ -0.54
CPSF3-202ENST00000460593 PSMA8Q8TAA3 256 aa11.71□□□□□ -0.54
CPSF3-202ENST00000460593 ZUFSPQ96AP4 578 aa11.71□□□□□ -0.54
CPSF3-202ENST00000460593 KCTD14Q9BQ13 255 aaPredicted RBP11.71□□□□□ -0.54
CPSF3-202ENST00000460593 CD320Q9NPF0 282 aa11.71□□□□□ -0.54
CPSF3-202ENST00000460593 ABCB10Q9NRK6 738 aa11.71□□□□□ -0.54
CPSF3-202ENST00000460593 INTS7Q9NVH2 962 aaKnown RBP11.71□□□□□ -0.54
CPSF3-202ENST00000460593 ACTR3BQ9P1U1 418 aa11.71□□□□□ -0.54
CPSF3-202ENST00000460593 BAG5Q9UL15 447 aa11.71□□□□□ -0.54
CPSF3-202ENST00000460593 PCDHGA3Q9Y5H0 932 aa11.71□□□□□ -0.54
CPSF3-202ENST00000460593 IGKV6D-21A0A0A0MT36 114 aa11.7□□□□□ -0.54
CPSF3-202ENST00000460593 FAM47E-STBD1D6RA91 191 aa11.7□□□□□ -0.54
CPSF3-202ENST00000460593 WNT10BO00744 389 aa11.7□□□□□ -0.54
CPSF3-202ENST00000460593 XPNPEP2O43895 674 aa11.7□□□□□ -0.54
CPSF3-202ENST00000460593 BEST1O76090 585 aa11.7□□□□□ -0.54
CPSF3-202ENST00000460593 CRHBPP24387 322 aa11.7□□□□□ -0.54
CPSF3-202ENST00000460593 ARCN1P48444 511 aaKnown RBP11.7□□□□□ -0.54
CPSF3-202ENST00000460593 NFYCQ13952 458 aa11.7□□□□□ -0.54
CPSF3-202ENST00000460593 TECRLQ5HYJ1 363 aa11.7□□□□□ -0.54
CPSF3-202ENST00000460593 LCN8Q6JVE9 175 aa11.7□□□□□ -0.54
CPSF3-202ENST00000460593 TERB1Q8NA31 727 aa11.7□□□□□ -0.54
CPSF3-202ENST00000460593 GLMNQ92990 594 aa11.7□□□□□ -0.54
CPSF3-202ENST00000460593 EMID1Q96A84 441 aaPredicted RBP11.7□□□□□ -0.54
CPSF3-202ENST00000460593 BIRC7Q96CA5 298 aa11.7□□□□□ -0.54
CPSF3-202ENST00000460593 ZNF419Q96HQ0 510 aaPredicted RBP11.7□□□□□ -0.54
CPSF3-202ENST00000460593 HGH1Q9BTY7 390 aa11.7□□□□□ -0.54
CPSF3-202ENST00000460593 GSTO2Q9H4Y5 243 aa11.7□□□□□ -0.54
CPSF3-202ENST00000460593 ALG2Q9H553 416 aa11.7□□□□□ -0.54
CPSF3-202ENST00000460593 ACAD9Q9H845 621 aa11.7□□□□□ -0.54
CPSF3-202ENST00000460593 LRRC4Q9HBW1 653 aa11.7□□□□□ -0.54
CPSF3-202ENST00000460593 AKIP1Q9NQ31 210 aa11.7□□□□□ -0.54
CPSF3-202ENST00000460593 PGAP2Q9UHJ9 254 aa11.7□□□□□ -0.54
CPSF3-202ENST00000460593 ANAPC2Q9UJX6 822 aa11.7□□□□□ -0.54
CPSF3-202ENST00000460593 ERVK-11Q9UQG0 969 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms