RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 DPH1Q9BZG8 443 aa10□□□□□ -0.81
HDLBP-228ENST00000459788 B3GNT4Q9C0J1 378 aa10□□□□□ -0.81
HDLBP-228ENST00000459788 FGF22Q9HCT0 170 aa10□□□□□ -0.81
HDLBP-228ENST00000459788 LUC7LQ9NQ29 371 aaKnown RBP10□□□□□ -0.81
HDLBP-228ENST00000459788 THSD1Q9NS62 852 aa10□□□□□ -0.81
HDLBP-228ENST00000459788 RAD18Q9NS91 495 aa10□□□□□ -0.81
HDLBP-228ENST00000459788 RBM22Q9NW64 420 aaKnown RBP eCLIP10□□□□□ -0.813e-6■■■■□ 24.5
HDLBP-228ENST00000459788 DTLQ9NZJ0 730 aa10□□□□□ -0.81
HDLBP-228ENST00000459788 SLC17A4Q9Y2C5 497 aa10□□□□□ -0.81
HDLBP-228ENST00000459788 CCDC187A0A096LP49 1063 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 NPIPB15A6NHN6 443 aaPredicted RBP9.99□□□□□ -0.81
HDLBP-228ENST00000459788 AKR1B15C9JRZ8 316 aaPredicted RBP9.99□□□□□ -0.81
HDLBP-228ENST00000459788 TK2O00142 265 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 PPP1R12AO14974 1030 aaPredicted RBP9.99□□□□□ -0.81
HDLBP-228ENST00000459788 TLX3O43711 291 aaPredicted RBP9.99□□□□□ -0.81
HDLBP-228ENST00000459788 LCA5LO95447 670 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 PRKCGP05129 697 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 CEACAM5P06731 702 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 LHCGRP22888 699 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 RBMS1P29558 406 aaKnown RBP9.99□□□□□ -0.81
HDLBP-228ENST00000459788 CCKBRP32239 447 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 EPHB1P54762 984 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 MAXP61244 160 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 GABREP78334 506 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 SKOR1P84550 965 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 CDK3Q00526 305 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 ITKQ08881 620 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 ILF3Q12906 894 aaKnown RBP eCLIP9.99□□□□□ -0.81
HDLBP-228ENST00000459788 LRP8Q14114 963 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 NR1D2Q14995 579 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 COL28A1Q2UY09 1125 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 ATP13A4Q4VNC1 1196 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 C14orf28Q4W4Y0 310 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 PERM1Q5SV97 790 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 CERCAMQ5T4B2 595 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 RD3Q7Z3Z2 195 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 TAF8Q7Z7C8 310 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 HEATR4Q86WZ0 1026 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 RHOT1Q8IXI2 618 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 CCDC170Q8IYT3 715 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 ARL14Q8N4G2 192 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 PLD5Q8N7P1 536 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 ARRDC2Q8TBH0 407 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.99□□□□□ -0.81
HDLBP-228ENST00000459788 SLC46A1Q96NT5 459 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 GFM1Q96RP9 751 aaKnown RBP9.99□□□□□ -0.81
HDLBP-228ENST00000459788 DPYSL5Q9BPU6 564 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 MAK16Q9BXY0 300 aaKnown RBP9.99□□□□□ -0.81
HDLBP-228ENST00000459788 PACSIN1Q9BY11 444 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 ADGRE3Q9BY15 652 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 STRADBQ9C0K7 418 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 PCDH9Q9HC56 1237 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 ASCL3Q9NQ33 180 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 VPS18Q9P253 973 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 NFKBIL1Q9UBC1 381 aaPredicted RBP9.99□□□□□ -0.81
HDLBP-228ENST00000459788 SSUH2Q9Y2M2 353 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 PCDHB1Q9Y5F3 818 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 ENTPD2Q9Y5L3 495 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 COL6A6A6NMZ7 2263 aa9.99□□□□□ -0.81
HDLBP-228ENST00000459788 A0A0A6YYK5 440 aaPredicted RBP9.98□□□□□ -0.81
HDLBP-228ENST00000459788 LRRD1A4D1F6 860 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 C3orf70A6NLC5 250 aaPredicted RBP9.98□□□□□ -0.81
HDLBP-228ENST00000459788 ANKRD66B4E2M5 251 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 GPR89AB7ZAQ6 455 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 D6RAR5 112 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 APOL1O14791 398 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 MTSS1O43312 755 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 PSTPIP1O43586 416 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 NOBOXO60393 691 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 ITGA2BP08514 1039 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 PDHA1P08559 390 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 GPR89BP0CG08 455 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 ETV3P41162 512 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 GPR3P46089 330 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 STC1P52823 247 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 CLDN6P56747 220 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 PTSQ03393 145 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 GBE1Q04446 702 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 SLC10A2Q12908 348 aaPredicted RBP9.98□□□□□ -0.81
HDLBP-228ENST00000459788 SQSTM1Q13501 440 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 TFDP2Q14188 446 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 HLTFQ14527 1009 aaKnown RBP eCLIP9.98□□□□□ -0.81
HDLBP-228ENST00000459788 MESDQ14696 234 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 TAZQ16635 292 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 ODF2Q5BJF6 829 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 ZFYVE27Q5T4F4 411 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 LRRC66Q68CR7 880 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 PDPK2PQ6A1A2 396 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 RAET1GQ6H3X3 334 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 CRTC1Q6UUV9 634 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 Q6ZVL8 140 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 ZNF438Q7Z4V0 828 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 HSD11B1LQ7Z5J1 315 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 CLEC14AQ86T13 490 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 KYQ8NBH2 561 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 CCNYQ8ND76 341 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 FAM46DQ8NEK8 389 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 EXD1Q8NHP7 514 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 CCHCR1Q8TD31 782 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 HNRNPLLQ8WVV9 542 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms