RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 LPOP22079 712 aaPredicted RBP10.98□□□□□ -0.65
SCN9A-205ENST00000454569 PSMA3P25788 255 aa10.98□□□□□ -0.65
SCN9A-205ENST00000454569 MMP12P39900 470 aa10.98□□□□□ -0.65
SCN9A-205ENST00000454569 XIAPP98170 497 aa10.98□□□□□ -0.65
SCN9A-205ENST00000454569 ACVR1Q04771 509 aa10.98□□□□□ -0.65
SCN9A-205ENST00000454569 PEX6Q13608 980 aa10.98□□□□□ -0.65
SCN9A-205ENST00000454569 SEMA3AQ14563 771 aa10.98□□□□□ -0.65
SCN9A-205ENST00000454569 STARD3Q14849 445 aa10.98□□□□□ -0.65
SCN9A-205ENST00000454569 LONRF1Q17RB8 773 aa10.98□□□□□ -0.65
SCN9A-205ENST00000454569 HSP90AA5PQ58FG0 334 aa10.98□□□□□ -0.65
SCN9A-205ENST00000454569 SPANXN3Q5MJ09 141 aa10.98□□□□□ -0.65
SCN9A-205ENST00000454569 EOGTQ5NDL2 527 aa10.98□□□□□ -0.65
SCN9A-205ENST00000454569 CFAP58Q5T655 872 aa10.98□□□□□ -0.65
SCN9A-205ENST00000454569 ZNF776Q68DI1 518 aaPredicted RBP10.98□□□□□ -0.65
SCN9A-205ENST00000454569 CWF19L1Q69YN2 538 aaKnown RBP10.98□□□□□ -0.65
SCN9A-205ENST00000454569 FBXL19Q6PCT2 694 aa10.98□□□□□ -0.65
SCN9A-205ENST00000454569 LDB1Q86U70 411 aaPredicted RBP10.98□□□□□ -0.65
SCN9A-205ENST00000454569 PELI3Q8N2H9 469 aa10.98□□□□□ -0.65
SCN9A-205ENST00000454569 HDDC3Q8N4P3 179 aa10.98□□□□□ -0.65
SCN9A-205ENST00000454569 FRMD1Q8N878 549 aa10.98□□□□□ -0.65
SCN9A-205ENST00000454569 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.98□□□□□ -0.65
SCN9A-205ENST00000454569 GPR26Q8NDV2 337 aa10.98□□□□□ -0.65
SCN9A-205ENST00000454569 PJA1Q8NG27 643 aa10.98□□□□□ -0.65
SCN9A-205ENST00000454569 GSDMBQ8TAX9 411 aa10.98□□□□□ -0.65
SCN9A-205ENST00000454569 HCAR2Q8TDS4 363 aa10.98□□□□□ -0.65
SCN9A-205ENST00000454569 EPS8L3Q8TE67 593 aaKnown RBP10.98□□□□□ -0.65
SCN9A-205ENST00000454569 CLDN23Q96B33 292 aa10.98□□□□□ -0.65
SCN9A-205ENST00000454569 CCDC97Q96F63 343 aaPredicted RBP10.98□□□□□ -0.65
SCN9A-205ENST00000454569 CDKN2AIPNLQ96HQ2 116 aa10.98□□□□□ -0.65
SCN9A-205ENST00000454569 GPR63Q9BZJ6 419 aa10.98□□□□□ -0.65
SCN9A-205ENST00000454569 FAM96AQ9H5X1 160 aa10.98□□□□□ -0.65
SCN9A-205ENST00000454569 VIPAS39Q9H9C1 493 aa10.98□□□□□ -0.65
SCN9A-205ENST00000454569 ZFYVE1Q9HBF4 777 aa10.98□□□□□ -0.65
SCN9A-205ENST00000454569 NLE1Q9NVX2 485 aaPredicted RBP10.98□□□□□ -0.65
SCN9A-205ENST00000454569 MARCH4Q9P2E8 410 aaPredicted RBP10.98□□□□□ -0.65
SCN9A-205ENST00000454569 CTNNAL1Q9UBT7 734 aa10.98□□□□□ -0.65
SCN9A-205ENST00000454569 CD84Q9UIB8 345 aa10.98□□□□□ -0.65
SCN9A-205ENST00000454569 FNDC3AQ9Y2H6 1198 aaKnown RBP10.98□□□□□ -0.65
SCN9A-205ENST00000454569 SDK1Q7Z5N4 2213 aa10.97□□□□□ -0.65
SCN9A-205ENST00000454569 FAM159BA6NKW6 160 aa10.97□□□□□ -0.65
SCN9A-205ENST00000454569 C1QTNF3-AMACRE9PGA6 284 aa10.97□□□□□ -0.65
SCN9A-205ENST00000454569 AP3B1O00203 1094 aa10.97□□□□□ -0.65
SCN9A-205ENST00000454569 CRTAMO95727 393 aa10.97□□□□□ -0.65
SCN9A-205ENST00000454569 GOT2P00505 430 aaKnown RBP10.97□□□□□ -0.65
SCN9A-205ENST00000454569 NUDT17P0C025 328 aa10.97□□□□□ -0.65
SCN9A-205ENST00000454569 BPIP17213 487 aa10.97□□□□□ -0.65
SCN9A-205ENST00000454569 VIPR1P32241 457 aa10.97□□□□□ -0.65
SCN9A-205ENST00000454569 HMGCLP35914 325 aa10.97□□□□□ -0.65
SCN9A-205ENST00000454569 ABCG1P45844 678 aa10.97□□□□□ -0.65
SCN9A-205ENST00000454569 SLCO1A2P46721 670 aa10.97□□□□□ -0.65
SCN9A-205ENST00000454569 PXNP49023 591 aaPredicted RBP10.97□□□□□ -0.65
SCN9A-205ENST00000454569 POLR2LP62875 67 aaKnown RBP10.97□□□□□ -0.65
SCN9A-205ENST00000454569 ZNF844Q08AG5 666 aa10.97□□□□□ -0.65
SCN9A-205ENST00000454569 MTAPQ13126 283 aa10.97□□□□□ -0.65
SCN9A-205ENST00000454569 ZNF789Q5FWF6 425 aa10.97□□□□□ -0.65
SCN9A-205ENST00000454569 TJAP1Q5JTD0 557 aa10.97□□□□□ -0.65
SCN9A-205ENST00000454569 LIPIQ6XZB0 460 aa10.97□□□□□ -0.65
SCN9A-205ENST00000454569 KDM7AQ6ZMT4 941 aa10.97□□□□□ -0.65
SCN9A-205ENST00000454569 Q6ZVL8 140 aa10.97□□□□□ -0.65
SCN9A-205ENST00000454569 DPPA4Q7L190 304 aa10.97□□□□□ -0.65
SCN9A-205ENST00000454569 SYT13Q7L8C5 426 aa10.97□□□□□ -0.65
SCN9A-205ENST00000454569 TRMT11Q7Z4G4 463 aaKnown RBP10.97□□□□□ -0.65
SCN9A-205ENST00000454569 PTAR1Q7Z6K3 402 aaPredicted RBP10.97□□□□□ -0.65
SCN9A-205ENST00000454569 DSG4Q86SJ6 1040 aa10.97□□□□□ -0.65
SCN9A-205ENST00000454569 FAM124AQ86V42 546 aa10.97□□□□□ -0.65
SCN9A-205ENST00000454569 DENND6AQ8IWF6 608 aa10.97□□□□□ -0.65
SCN9A-205ENST00000454569 CYP4X1Q8N118 509 aa10.97□□□□□ -0.65
SCN9A-205ENST00000454569 HMGB4Q8WW32 186 aa10.97□□□□□ -0.65
SCN9A-205ENST00000454569 FAM131CQ96AQ9 280 aa10.97□□□□□ -0.65
SCN9A-205ENST00000454569 CERS2Q96G23 380 aa10.97□□□□□ -0.65
SCN9A-205ENST00000454569 SHDQ96IW2 340 aa10.97□□□□□ -0.65
SCN9A-205ENST00000454569 TTC25Q96NG3 672 aa10.97□□□□□ -0.65
SCN9A-205ENST00000454569 HHIPQ96QV1 700 aa10.97□□□□□ -0.65
SCN9A-205ENST00000454569 HDAC8Q9BY41 377 aa10.97□□□□□ -0.65
SCN9A-205ENST00000454569 ACSS3Q9H6R3 686 aa10.97□□□□□ -0.65
SCN9A-205ENST00000454569 IARS2Q9NSE4 1012 aaKnown RBP10.97□□□□□ -0.65
SCN9A-205ENST00000454569 C20orf96Q9NUD7 363 aaPredicted RBP10.97□□□□□ -0.65
SCN9A-205ENST00000454569 FBXL12Q9NXK8 326 aa10.97□□□□□ -0.65
SCN9A-205ENST00000454569 DLGAP2Q9P1A6 1054 aa10.97□□□□□ -0.65
SCN9A-205ENST00000454569 FADS3Q9Y5Q0 445 aa10.97□□□□□ -0.65
SCN9A-205ENST00000454569 A0A087WUV0 522 aaPredicted RBP10.96□□□□□ -0.65
SCN9A-205ENST00000454569 SMIM23A6NLE4 172 aa10.96□□□□□ -0.65
SCN9A-205ENST00000454569 C2orf81A6NN90 581 aa10.96□□□□□ -0.65
SCN9A-205ENST00000454569 POM121CA8CG34 1229 aa10.96□□□□□ -0.65
SCN9A-205ENST00000454569 POC1B-GALNT4F8VUJ3 575 aa10.96□□□□□ -0.65
SCN9A-205ENST00000454569 MMP20O60882 483 aa10.96□□□□□ -0.65
SCN9A-205ENST00000454569 RNASEH1O60930 286 aaKnown RBP10.96□□□□□ -0.65
SCN9A-205ENST00000454569 RNASEH2AO75792 299 aaKnown RBP10.96□□□□□ -0.65
SCN9A-205ENST00000454569 PAPSS2O95340 614 aaPredicted RBP10.96□□□□□ -0.65
SCN9A-205ENST00000454569 ABHD2P08910 425 aa10.96□□□□□ -0.65
SCN9A-205ENST00000454569 C5AR1P21730 350 aa10.96□□□□□ -0.65
SCN9A-205ENST00000454569 GABRB3P28472 473 aa10.96□□□□□ -0.65
SCN9A-205ENST00000454569 ETV3P41162 512 aa10.96□□□□□ -0.65
SCN9A-205ENST00000454569 LIG3P49916 1009 aa10.96□□□□□ -0.65
SCN9A-205ENST00000454569 NEK3P51956 506 aa10.96□□□□□ -0.65
SCN9A-205ENST00000454569 STC1P52823 247 aa10.96□□□□□ -0.65
SCN9A-205ENST00000454569 GPS2Q13227 327 aa10.96□□□□□ -0.65
SCN9A-205ENST00000454569 CTBP1Q13363 440 aa10.96□□□□□ -0.65
SCN9A-205ENST00000454569 LRRC32Q14392 662 aa10.96□□□□□ -0.65
SCN9A-205ENST00000454569 SPDYCQ5MJ68 293 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms