RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 LINGO2Q7L985 606 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 AMIGO2Q86SJ2 522 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 GPSM1Q86YR5 675 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 NUP93Q8N1F7 819 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 LRRC57Q8N9N7 239 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 PNLDC1Q8NA58 520 aaKnown RBP4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 OR10S1Q8NGN2 331 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 FIBINQ8TAL6 211 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 CAGE1Q8TC20 777 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 MGARPQ8TDB4 240 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 TAS1R2Q8TE23 839 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 LPGAT1Q92604 370 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 EME1Q96AY2 570 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 CDHR1Q96JP9 859 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 GBP5Q96PP8 586 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 SLC25A23Q9BV35 468 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 TUBB2BQ9BVA1 445 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 COPS7BQ9H9Q2 264 aaPredicted RBP4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 MKKSQ9NPJ1 570 aaPredicted RBP4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 MBNL1Q9NR56 388 aaKnown RBP4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 CWC25Q9NXE8 425 aaPredicted RBP4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 ANKRD10Q9NXR5 420 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 COQ3Q9NZJ6 369 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 CNOT11Q9UKZ1 510 aaKnown RBP4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 SLC8A2Q9UPR5 921 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 ZNF148Q9UQR1 794 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 A0A0U1RQK1 487 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 ZNF320A2RRD8 509 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 C17orf102A2RUQ5 167 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 OR6C76A6NM76 312 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 MAGEB17A8MXT2 336 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 UBE2Q2LH0YL09 131 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 VCYO14598 125 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 SYNCRIPO60506 623 aaKnown RBP4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 DAB1O75553 588 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 RSL1D1O76021 490 aaKnown RBP4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 RGS11O94810 467 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 ZWINTO95229 277 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 PENKP01210 267 aaPredicted RBP4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 HIST1H2ABP04908 130 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 HSP90AB1P08238 724 aaKnown RBP4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 CYC1P08574 325 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 ACTN1P12814 892 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 FDPSP14324 419 aaKnown RBP4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 HIST1H2ADP20671 130 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 AVPR1BP47901 424 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 CLK1P49759 484 aaKnown RBP4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 BPIFB3P59826 476 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 FAM27E3Q08E93 113 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 PPIGQ13427 754 aaKnown RBP eCLIP4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 ARHGEF6Q15052 776 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 ZNF674Q2M3X9 581 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 LSM12Q3MHD2 195 aaKnown RBP4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 CBWD6Q4V339 395 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 CBWD3Q5JTY5 395 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 C6orf163Q5TEZ5 329 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 LRIG3Q6UXM1 1119 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 ERN2Q76MJ5 926 aaKnown RBP4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 HIST3H2AQ7L7L0 130 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 UBE2Q1Q7Z7E8 422 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 LDB1Q86U70 411 aaPredicted RBP4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 IGFN1Q86VF2 1251 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 CEP57Q86XR8 500 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 DENND6AQ8IWF6 608 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 DDIASQ8IXT1 998 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 ZNF595Q8IYB9 648 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 HACE1Q8IYU2 909 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 RBFAQ8N0V3 343 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 SLC25A41Q8N5S1 370 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 BEST2Q8NFU1 509 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 OR8H1Q8NGG4 311 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 MOSPD2Q8NHP6 518 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 GPT2Q8TD30 523 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 BCAS4Q8TDM0 211 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 NSMCE1Q8WV22 266 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 KCNE4Q8WWG9 221 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 FAM162AQ96A26 154 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 ARSGQ96EG1 525 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 ZNF419Q96HQ0 510 aaPredicted RBP4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 CDK5RAP1Q96SZ6 601 aaKnown RBP4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 ABHD6Q9BV23 337 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 NUP85Q9BW27 656 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 NPFFR1Q9GZQ6 430 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 LHPPQ9H008 270 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 PCED1AQ9H1Q7 454 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 SLCO5A1Q9H2Y9 848 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 MMP27Q9H306 513 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 PIGMQ9H3S5 423 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 AAMDCQ9H7C9 122 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 CYP4F11Q9HBI6 524 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 PNRC2Q9NPJ4 139 aaKnown RBP4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 CWC15Q9P013 229 aaKnown RBP4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 COPG2Q9UBF2 871 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 IPO11Q9UI26 975 aaKnown RBP4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 MAFFQ9ULX9 164 aa4.24□□□□□ -1.73
HMGN3P1-201ENST00000453847 TMEM202A6NGA9 273 aa4.23□□□□□ -1.73
HMGN3P1-201ENST00000453847 C19orf81C9J6K1 198 aa4.23□□□□□ -1.73
HMGN3P1-201ENST00000453847 NARSO43776 548 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms