RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 AOPEPQ8N6M6 819 aa11.67□□□□□ -0.54
GARNL3-210ENST00000453030 ZSCAN1Q8NBB4 408 aa11.67□□□□□ -0.54
GARNL3-210ENST00000453030 GPBAR1Q8TDU6 330 aa11.67□□□□□ -0.54
GARNL3-210ENST00000453030 HTR3CQ8WXA8 447 aa11.67□□□□□ -0.54
GARNL3-210ENST00000453030 PMEPA1Q969W9 287 aa11.67□□□□□ -0.54
GARNL3-210ENST00000453030 ZNF653Q96CK0 615 aa11.67□□□□□ -0.54
GARNL3-210ENST00000453030 DTD2Q96FN9 168 aa11.67□□□□□ -0.54
GARNL3-210ENST00000453030 CCDC74BQ96LY2 380 aa11.67□□□□□ -0.54
GARNL3-210ENST00000453030 FRMD8Q9BZ67 464 aaPredicted RBP11.67□□□□□ -0.54
GARNL3-210ENST00000453030 HSD3B7Q9H2F3 369 aa11.67□□□□□ -0.54
GARNL3-210ENST00000453030 ZWILCHQ9H900 591 aa11.67□□□□□ -0.54
GARNL3-210ENST00000453030 ETNK2Q9NVF9 386 aa11.67□□□□□ -0.54
GARNL3-210ENST00000453030 AKAP7Q9P0M2 348 aaPredicted RBP11.67□□□□□ -0.54
GARNL3-210ENST00000453030 CNOT8Q9UFF9 292 aaKnown RBP11.67□□□□□ -0.54
GARNL3-210ENST00000453030 SPENQ96T58 3664 aaKnown RBP11.67□□□□□ -0.54
GARNL3-210ENST00000453030 A0A0U1RQS6 177 aa11.66□□□□□ -0.54
GARNL3-210ENST00000453030 A0A1W2PQC6 194 aa11.66□□□□□ -0.54
GARNL3-210ENST00000453030 TMEM191CA6NGB0 347 aa11.66□□□□□ -0.54
GARNL3-210ENST00000453030 NPIPB15A6NHN6 443 aaPredicted RBP11.66□□□□□ -0.54
GARNL3-210ENST00000453030 H3BRJ5 948 aa11.66□□□□□ -0.54
GARNL3-210ENST00000453030 HTRA2O43464 458 aaPredicted RBP11.66□□□□□ -0.54
GARNL3-210ENST00000453030 B4GAT1O43505 415 aa11.66□□□□□ -0.54
GARNL3-210ENST00000453030 FUCA1P04066 466 aa11.66□□□□□ -0.54
GARNL3-210ENST00000453030 FGF1P05230 155 aa11.66□□□□□ -0.54
GARNL3-210ENST00000453030 CEACAM5P06731 702 aa11.66□□□□□ -0.54
GARNL3-210ENST00000453030 TCF4P15884 667 aa11.66□□□□□ -0.54
GARNL3-210ENST00000453030 CTPS1P17812 591 aa11.66□□□□□ -0.54
GARNL3-210ENST00000453030 IL1R2P27930 398 aa11.66□□□□□ -0.54
GARNL3-210ENST00000453030 POLD2P49005 469 aa11.66□□□□□ -0.54
GARNL3-210ENST00000453030 PPM1FP49593 454 aaPredicted RBP11.66□□□□□ -0.54
GARNL3-210ENST00000453030 NCAPHQ15003 741 aa11.66□□□□□ -0.54
GARNL3-210ENST00000453030 TMEM164Q5U3C3 297 aa11.66□□□□□ -0.54
GARNL3-210ENST00000453030 NKAIN2Q5VXU1 208 aa11.66□□□□□ -0.54
GARNL3-210ENST00000453030 E4F1Q66K89 784 aaPredicted RBP11.66□□□□□ -0.54
GARNL3-210ENST00000453030 TMCO3Q6UWJ1 677 aa11.66□□□□□ -0.54
GARNL3-210ENST00000453030 ZNF438Q7Z4V0 828 aa11.66□□□□□ -0.54
GARNL3-210ENST00000453030 TRIM74Q86UV6 250 aa11.66□□□□□ -0.54
GARNL3-210ENST00000453030 DTX1Q86Y01 620 aa11.66□□□□□ -0.54
GARNL3-210ENST00000453030 PGBD5Q8N414 524 aa11.66□□□□□ -0.54
GARNL3-210ENST00000453030 ATPAF2Q8N5M1 289 aa11.66□□□□□ -0.54
GARNL3-210ENST00000453030 FNIP1Q8TF40 1166 aa11.66□□□□□ -0.54
GARNL3-210ENST00000453030 HSPH1Q92598 858 aa11.66□□□□□ -0.54
GARNL3-210ENST00000453030 ZNF599Q96NL3 588 aa11.66□□□□□ -0.54
GARNL3-210ENST00000453030 NUDCD1Q96RS6 583 aa11.66□□□□□ -0.54
GARNL3-210ENST00000453030 TEX101Q9BY14 249 aa11.66□□□□□ -0.54
GARNL3-210ENST00000453030 HAUS4Q9H6D7 363 aa11.66□□□□□ -0.54
GARNL3-210ENST00000453030 NOD2Q9HC29 1040 aa11.66□□□□□ -0.54
GARNL3-210ENST00000453030 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.66□□□□□ -0.54
GARNL3-210ENST00000453030 MYO1AQ9UBC5 1043 aa11.66□□□□□ -0.54
GARNL3-210ENST00000453030 CD84Q9UIB8 345 aa11.66□□□□□ -0.54
GARNL3-210ENST00000453030 ST14Q9Y5Y6 855 aa11.66□□□□□ -0.54
GARNL3-210ENST00000453030 RELNP78509 3460 aa11.65□□□□□ -0.54
GARNL3-210ENST00000453030 IGHV5-10-1A0A0J9YXX1 117 aa11.65□□□□□ -0.54
GARNL3-210ENST00000453030 CYSRT1A8MQ03 144 aa11.65□□□□□ -0.54
GARNL3-210ENST00000453030 STMND1H3BQB6 276 aa11.65□□□□□ -0.54
GARNL3-210ENST00000453030 PEX11BO96011 259 aa11.65□□□□□ -0.54
GARNL3-210ENST00000453030 FTLP02792 175 aaPredicted RBP11.65□□□□□ -0.54
GARNL3-210ENST00000453030 CYP2A6P11509 494 aaPredicted RBP11.65□□□□□ -0.54
GARNL3-210ENST00000453030 CR2P20023 1033 aa11.65□□□□□ -0.54
GARNL3-210ENST00000453030 AMPD1P23109 780 aa11.65□□□□□ -0.54
GARNL3-210ENST00000453030 MPSTP25325 297 aa11.65□□□□□ -0.54
GARNL3-210ENST00000453030 NFKBIAP25963 317 aa11.65□□□□□ -0.54
GARNL3-210ENST00000453030 CD82P27701 267 aa11.65□□□□□ -0.54
GARNL3-210ENST00000453030 CSF2RBP32927 897 aa11.65□□□□□ -0.54
GARNL3-210ENST00000453030 HSPA9P38646 679 aaKnown RBP11.65□□□□□ -0.54
GARNL3-210ENST00000453030 ARL4AP40617 200 aa11.65□□□□□ -0.54
GARNL3-210ENST00000453030 ACTR1BP42025 376 aa11.65□□□□□ -0.54
GARNL3-210ENST00000453030 GPR1P46091 355 aa11.65□□□□□ -0.54
GARNL3-210ENST00000453030 ACTR1AP61163 376 aa11.65□□□□□ -0.54
GARNL3-210ENST00000453030 CTBSQ01459 385 aa11.65□□□□□ -0.54
GARNL3-210ENST00000453030 NR1D2Q14995 579 aa11.65□□□□□ -0.54
GARNL3-210ENST00000453030 TBR1Q16650 682 aa11.65□□□□□ -0.54
GARNL3-210ENST00000453030 ZNF574Q6ZN55 896 aaPredicted RBP11.65□□□□□ -0.54
GARNL3-210ENST00000453030 RFLNAQ6ZTI6 216 aa11.65□□□□□ -0.54
GARNL3-210ENST00000453030 Q6ZVL8 140 aa11.65□□□□□ -0.54
GARNL3-210ENST00000453030 USP45Q70EL2 814 aa11.65□□□□□ -0.54
GARNL3-210ENST00000453030 MARK2Q7KZI7 788 aaKnown RBP11.65□□□□□ -0.54
GARNL3-210ENST00000453030 ZNF571Q7Z3V5 609 aaPredicted RBP11.65□□□□□ -0.54
GARNL3-210ENST00000453030 C17orf82Q86X59 251 aaPredicted RBP11.65□□□□□ -0.54
GARNL3-210ENST00000453030 ZNF761Q86XN6 746 aaPredicted RBP11.65□□□□□ -0.54
GARNL3-210ENST00000453030 PSTKQ8IV42 348 aaKnown RBP11.65□□□□□ -0.54
GARNL3-210ENST00000453030 NAGSQ8N159 534 aa11.65□□□□□ -0.54
GARNL3-210ENST00000453030 BBS5Q8N3I7 341 aa11.65□□□□□ -0.54
GARNL3-210ENST00000453030 LZTR1Q8N653 840 aa11.65□□□□□ -0.54
GARNL3-210ENST00000453030 SMIM14Q96QK8 99 aa11.65□□□□□ -0.54
GARNL3-210ENST00000453030 MGME1Q9BQP7 344 aa11.65□□□□□ -0.54
GARNL3-210ENST00000453030 CDH19Q9H159 772 aa11.65□□□□□ -0.54
GARNL3-210ENST00000453030 STARD5Q9NSY2 213 aa11.65□□□□□ -0.54
GARNL3-210ENST00000453030 TRNAU1APQ9NX07 287 aaKnown RBP11.65□□□□□ -0.54
GARNL3-210ENST00000453030 PHTF1Q9UMS5 762 aa11.65□□□□□ -0.54
GARNL3-210ENST00000453030 PLEKHM1Q9Y4G2 1056 aa11.65□□□□□ -0.54
GARNL3-210ENST00000453030 SCINQ9Y6U3 715 aa11.65□□□□□ -0.54
GARNL3-210ENST00000453030 A0A1W2PQ67 120 aa11.64□□□□□ -0.55
GARNL3-210ENST00000453030 LRRC10BA6NIK2 292 aa11.64□□□□□ -0.55
GARNL3-210ENST00000453030 PSMD11O00231 422 aa11.64□□□□□ -0.55
GARNL3-210ENST00000453030 DDX3XO00571 662 aaKnown RBP eCLIP11.64□□□□□ -0.55
GARNL3-210ENST00000453030 HGSO14964 777 aaPredicted RBP11.64□□□□□ -0.55
GARNL3-210ENST00000453030 MAFKO60675 156 aa11.64□□□□□ -0.55
GARNL3-210ENST00000453030 PGLSO95336 258 aa11.64□□□□□ -0.55
GARNL3-210ENST00000453030 FGF3P11487 239 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms