RNA–Protein interactions for RNA: ENST00000452067.1

NUCKS1P1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1 pseudogene 1, humanhuman

BASIC

Gene NUCKS1P1, Length 703 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1P1-201ENST00000452067 KRT10P13645 584 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 TCF4P15884 667 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 BRCC3P46736 316 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 OR1G1P47890 313 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 KCNJ1P48048 391 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 NR2C2P49116 596 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 SULT1E1P49888 294 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 PMS2P54278 862 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 PLTPP55058 493 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 HDAC4P56524 1084 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 XRCC4Q13426 336 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 DPYSL3Q14195 570 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 MORF4L2Q15014 288 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 NOMO1Q15155 1222 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 CSRP2Q16527 193 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 ARL13BQ3SXY8 428 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 RABL3Q5HYI8 236 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 KCNT1Q5JUK3 1230 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 PRAMEF14Q5SWL7 426 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 DENND2CQ68D51 928 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 PM20D1Q6GTS8 502 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 ZNF280DQ6N043 979 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 TRNP1Q6NT89 227 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 SCYL2Q6P3W7 929 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 VSTM1Q6UX27 236 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 CD300LGQ6UXG3 332 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 SLC39A5Q6ZMH5 540 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 Q6ZVL8 140 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 USP51Q70EK9 711 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 HOOK3Q86VS8 718 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 IQCKQ8N0W5 287 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 DEFB106AQ8N104 65 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 LRRC43Q8N309 656 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 ARHGAP18Q8N392 663 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 CNTD1Q8N815 330 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 DBF4BQ8NFT6 615 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 FBXO25Q8TCJ0 367 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 C2orf15Q8WU43 125 aaKnown RBP7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 UBLCP1Q8WVY7 318 aaPredicted RBP7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 ATG4AQ8WYN0 398 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 HOXB13Q92826 284 aaPredicted RBP7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 NTAN1Q96AB6 310 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 PIWIL1Q96J94 861 aaKnown RBP7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 CEP295NLQ96MC4 621 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 ZIM3Q96PE6 472 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 NPY6RQ99463 290 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 PKMYT1Q99640 499 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 SMOQ99835 787 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 SH3GL2Q99962 352 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 PAAF1Q9BRP4 392 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 MENTQ9BUN1 341 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 ULBP1Q9BZM6 244 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 PABPC3Q9H361 631 aaKnown RBP7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 KLHL11Q9NVR0 708 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 ANAPC5Q9UJX4 755 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 ADAM28Q9UKQ2 775 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 DNPEPQ9ULA0 475 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 SHOC2Q9UQ13 582 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 R3HDM2Q9Y2K5 976 aaKnown RBP7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 RAD54BQ9Y620 910 aa7.54□□□□□ -1.2
NUCKS1P1-201ENST00000452067 PCNTO95613 3336 aa7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 GREB1Q4ZG55 1949 aa7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 HACD1B0YJ81 288 aa7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 HMGB1P1B2RPK0 211 aaPredicted RBP7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 SGK1O00141 431 aa7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 DNALI1O14645 258 aaPredicted RBP7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 HCRTO43612 131 aa7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 DDHD2O94830 711 aa7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 SLPIP03973 132 aa7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 NUDT17P0C025 328 aa7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 IBSPP21815 317 aaPredicted RBP7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 BDNFP23560 247 aa7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 KLRC2P26717 231 aa7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 CYP2C18P33260 490 aa7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 HTR7P34969 479 aa7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 HSD17B3P37058 310 aa7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 MAGEA11P43364 429 aa7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 SLC5A3P53794 718 aa7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 EIF3EP60228 445 aaKnown RBP7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 CBX1P83916 185 aa7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 OTUD4Q01804 1114 aaKnown RBP7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 ROR1Q01973 937 aa7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 DEUP1Q05D60 604 aa7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 SCAPQ12770 1279 aa7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 FAM153CQ494X1 144 aa7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 DCAF6Q58WW2 860 aa7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 ANKRD20A8PQ5CZ79 823 aa7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 MBNL2Q5VZF2 373 aaKnown RBP7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 ANKS6Q68DC2 871 aa7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 SLC9A4Q6AI14 798 aa7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 TXNRD3NBQ6F5E7 133 aa7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 FBXO46Q6PJ61 603 aaPredicted RBP7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 RHBDF2Q6PJF5 856 aa7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 ZDHHC24Q6UX98 284 aa7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 PPP1R21Q6ZMI0 780 aa7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 CYP4V2Q6ZWL3 525 aaPredicted RBP7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 PDZD4Q76G19 769 aaPredicted RBP7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 BNIPLQ7Z465 357 aa7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 CTU1Q7Z7A3 348 aaKnown RBP7.53□□□□□ -1.2
NUCKS1P1-201ENST00000452067 CDKL3Q8IVW4 592 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms