RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 SLC4A1P02730 911 aa16.1■□□□□ 0.17
AP000253.1-201ENST00000449339 ACAP2Q15057 778 aa16.1■□□□□ 0.17
AP000253.1-201ENST00000449339 SLC5A9Q2M3M2 681 aa16.1■□□□□ 0.17
AP000253.1-201ENST00000449339 FAM45BPQ6NSW5 357 aa16.1■□□□□ 0.17
AP000253.1-201ENST00000449339 PIWIL4Q7Z3Z4 852 aaKnown RBP16.1■□□□□ 0.17
AP000253.1-201ENST00000449339 LPCAT1Q8NF37 534 aa16.1■□□□□ 0.17
AP000253.1-201ENST00000449339 OR4L1Q8NH43 312 aa16.1■□□□□ 0.17
AP000253.1-201ENST00000449339 PHOSPHO2Q8TCD6 241 aa16.1■□□□□ 0.17
AP000253.1-201ENST00000449339 FAM45AQ8TCE6 357 aa16.1■□□□□ 0.17
AP000253.1-201ENST00000449339 SH3RF2Q8TEC5 729 aa16.1■□□□□ 0.17
AP000253.1-201ENST00000449339 OR52B2Q96RD2 323 aa16.1■□□□□ 0.17
AP000253.1-201ENST00000449339 PLA2G4CQ9UP65 541 aa16.1■□□□□ 0.17
AP000253.1-201ENST00000449339 SMAD6O43541 496 aaKnown RBP16.1■□□□□ 0.17
AP000253.1-201ENST00000449339 RBP1P09455 135 aa16.1■□□□□ 0.17
AP000253.1-201ENST00000449339 CHRM1P11229 460 aaPredicted RBP16.1■□□□□ 0.17
AP000253.1-201ENST00000449339 BMP1P13497 986 aa16.1■□□□□ 0.17
AP000253.1-201ENST00000449339 CES1P23141 567 aa16.1■□□□□ 0.17
AP000253.1-201ENST00000449339 COPAP53621 1224 aa16.1■□□□□ 0.17
AP000253.1-201ENST00000449339 DNAJB13P59910 316 aa16.1■□□□□ 0.17
AP000253.1-201ENST00000449339 TRAF2Q12933 501 aa16.1■□□□□ 0.17
AP000253.1-201ENST00000449339 KPNB1Q14974 876 aaKnown RBP16.1■□□□□ 0.17
AP000253.1-201ENST00000449339 KHDC1Q4VXA5 237 aaKnown RBP16.1■□□□□ 0.17
AP000253.1-201ENST00000449339 TRIM67Q6ZTA4 783 aa16.1■□□□□ 0.17
AP000253.1-201ENST00000449339 PHTF2Q8N3S3 785 aa16.1■□□□□ 0.17
AP000253.1-201ENST00000449339 POU5F2Q8N7G0 328 aa16.1■□□□□ 0.17
AP000253.1-201ENST00000449339 WDR55Q9H6Y2 383 aaPredicted RBP16.1■□□□□ 0.17
AP000253.1-201ENST00000449339 CATSPERZQ9NTU4 200 aa16.1■□□□□ 0.17
AP000253.1-201ENST00000449339 PRRC2BQ5JSZ5 2229 aaKnown RBP16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 RANBP2P49792 3224 aaKnown RBP16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 GOLGA8QA0A0J9YX86 632 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 GOLGA8OA6NCC3 632 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 GOLGA8NF8WBI6 632 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 SLCO1B7G3V0H7 640 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 NPHS1O60500 1241 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 WISP3O95389 354 aaPredicted RBP16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 PRSS56P0CW18 603 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 EPHA3P29320 983 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 CD70P32970 193 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 CPOXP36551 454 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 SLC26A3P40879 764 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 RAP1GDS1P52306 607 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 RHOAP61586 193 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 PFKPQ01813 784 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 NSUN2Q08J23 767 aaKnown RBP eCLIP16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 LMAN2Q12907 356 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 SEMA3AQ14563 771 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 ACCSLQ4AC99 568 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 TMEM207Q6UWW9 146 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 GLT6D1Q7Z4J2 308 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 PIM3Q86V86 326 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 ENDOVQ8N8Q3 282 aaKnown RBP16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 MDGA1Q8NFP4 955 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 OR6K2Q8NGY2 324 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 CMTM5Q96DZ9 223 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 CCDC126Q96EE4 140 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 CDKN2AIPNLQ96HQ2 116 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 PPP1R36Q96LQ0 422 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 NUF2Q9BZD4 464 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 TM6SF2Q9BZW4 377 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 VTI1BQ9UEU0 232 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 MEI4A8MW99 385 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 H0Y3Z8 333 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 GRID2O43424 1007 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 ZBTB14O43829 449 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 TM7SF2O76062 418 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 IPO13O94829 963 aaKnown RBP16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 RHOP08100 348 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 TPBGLP0DKB5 382 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 KCNA5P22460 613 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 PMLP29590 882 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 ZNF140P52738 457 aaPredicted RBP16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 ILF2Q12905 390 aaKnown RBP16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 ZNF549Q6P9A3 640 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 NCEH1Q6PIU2 408 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 SDCCAG8Q86SQ7 713 aaPredicted RBP16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 CMTM8Q8IZV2 173 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 CPXM2Q8N436 756 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 WDR60Q8WVS4 1066 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 FAM161BQ96MY7 647 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 THTPAQ9BU02 230 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 DCLRE1BQ9H816 532 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 CYP4F12Q9HCS2 524 aa16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 NLE1Q9NVX2 485 aaPredicted RBP16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 MTF2Q9Y483 593 aaPredicted RBP16.09■□□□□ 0.17
AP000253.1-201ENST00000449339 A8MT66 165 aa16.08■□□□□ 0.16
AP000253.1-201ENST00000449339 NEMP1O14524 444 aa16.08■□□□□ 0.16
AP000253.1-201ENST00000449339 CLASP2O75122 1294 aaKnown RBP16.08■□□□□ 0.16
AP000253.1-201ENST00000449339 LMNAP02545 664 aaKnown RBP16.08■□□□□ 0.16
AP000253.1-201ENST00000449339 OGNP20774 298 aaKnown RBP16.08■□□□□ 0.16
AP000253.1-201ENST00000449339 FDXRP22570 491 aa16.08■□□□□ 0.16
AP000253.1-201ENST00000449339 SERPINB5P36952 375 aa16.08■□□□□ 0.16
AP000253.1-201ENST00000449339 STC1P52823 247 aa16.08■□□□□ 0.16
AP000253.1-201ENST00000449339 MPPE1Q53F39 396 aa16.08■□□□□ 0.16
AP000253.1-201ENST00000449339 ACSBG2Q5FVE4 666 aa16.08■□□□□ 0.16
AP000253.1-201ENST00000449339 SCUBE1Q8IWY4 988 aa16.08■□□□□ 0.16
AP000253.1-201ENST00000449339 ULK2Q8IYT8 1036 aa16.08■□□□□ 0.16
AP000253.1-201ENST00000449339 DCAF4L2Q8NA75 395 aa16.08■□□□□ 0.16
AP000253.1-201ENST00000449339 CNDP1Q96KN2 507 aa16.08■□□□□ 0.16
AP000253.1-201ENST00000449339 GEMIN8Q9NWZ8 242 aaKnown RBP16.08■□□□□ 0.16
AP000253.1-201ENST00000449339 CORO1CQ9ULV4 474 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms