RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 SERPINA4P29622 427 aa10.57□□□□□ -0.72
VIPAS39-203ENST00000448935 WEE1P30291 646 aa10.57□□□□□ -0.72
VIPAS39-203ENST00000448935 CD70P32970 193 aa10.57□□□□□ -0.72
VIPAS39-203ENST00000448935 PPARGP37231 505 aaPredicted RBP10.57□□□□□ -0.72
VIPAS39-203ENST00000448935 TTPAP49638 278 aa10.57□□□□□ -0.72
VIPAS39-203ENST00000448935 LIG3P49916 1009 aa10.57□□□□□ -0.72
VIPAS39-203ENST00000448935 RASSF2P50749 326 aa10.57□□□□□ -0.72
VIPAS39-203ENST00000448935 MMP16P51512 607 aa10.57□□□□□ -0.72
VIPAS39-203ENST00000448935 ZBTB16Q05516 673 aa10.57□□□□□ -0.72
VIPAS39-203ENST00000448935 RAD51Q06609 339 aa10.57□□□□□ -0.72
VIPAS39-203ENST00000448935 ITGA9Q13797 1035 aa10.57□□□□□ -0.72
VIPAS39-203ENST00000448935 ZNF77Q15935 545 aa10.57□□□□□ -0.72
VIPAS39-203ENST00000448935 GRASPQ7Z6J2 395 aaPredicted RBP10.57□□□□□ -0.72
VIPAS39-203ENST00000448935 ARID3BQ8IVW6 561 aaPredicted RBP10.57□□□□□ -0.72
VIPAS39-203ENST00000448935 CEP97Q8IW35 865 aa10.57□□□□□ -0.72
VIPAS39-203ENST00000448935 CENPLQ8N0S6 344 aaPredicted RBP10.57□□□□□ -0.72
VIPAS39-203ENST00000448935 FSTL5Q8N475 847 aaPredicted RBP10.57□□□□□ -0.72
VIPAS39-203ENST00000448935 PCDH20Q8N6Y1 951 aaKnown RBP10.57□□□□□ -0.72
VIPAS39-203ENST00000448935 PAF1Q8N7H5 531 aa10.57□□□□□ -0.72
VIPAS39-203ENST00000448935 ACVR1CQ8NER5 493 aa10.57□□□□□ -0.72
VIPAS39-203ENST00000448935 MDGA1Q8NFP4 955 aa10.57□□□□□ -0.72
VIPAS39-203ENST00000448935 OR2AP1Q8NGE2 309 aa10.57□□□□□ -0.72
VIPAS39-203ENST00000448935 RFWD2Q8NHY2 731 aa10.57□□□□□ -0.72
VIPAS39-203ENST00000448935 KCTD4Q8WVF5 259 aa10.57□□□□□ -0.72
VIPAS39-203ENST00000448935 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.57□□□□□ -0.72
VIPAS39-203ENST00000448935 ERP27Q96DN0 273 aa10.57□□□□□ -0.72
VIPAS39-203ENST00000448935 BBS2Q9BXC9 721 aa10.57□□□□□ -0.72
VIPAS39-203ENST00000448935 SMG9Q9H0W8 520 aaKnown RBP10.57□□□□□ -0.72
VIPAS39-203ENST00000448935 SAR1AQ9NR31 198 aa10.57□□□□□ -0.72
VIPAS39-203ENST00000448935 ZFP69BQ9UJL9 534 aa10.57□□□□□ -0.72
VIPAS39-203ENST00000448935 HS3ST2Q9Y278 367 aa10.57□□□□□ -0.72
VIPAS39-203ENST00000448935 MRPS23Q9Y3D9 190 aaKnown RBP10.57□□□□□ -0.72
VIPAS39-203ENST00000448935 SPO11Q9Y5K1 396 aa10.57□□□□□ -0.72
VIPAS39-203ENST00000448935 HCFC2Q9Y5Z7 792 aa10.57□□□□□ -0.72
VIPAS39-203ENST00000448935 COMMD10Q9Y6G5 202 aa10.57□□□□□ -0.72
VIPAS39-203ENST00000448935 CAPN7Q9Y6W3 813 aa10.57□□□□□ -0.72
VIPAS39-203ENST00000448935 GBF1Q92538 1859 aa10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 GOLGA8CPA6NN73 597 aa10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 NEDD8-MDP1E9PL57 170 aa10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 HTRA2O43464 458 aaPredicted RBP10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 CCDC22O60826 627 aa10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 NDUFS3O75489 264 aa10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 MT-CO1P00395 513 aa10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 CA3P07451 260 aa10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 F7P08709 466 aaPredicted RBP10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 HMGCLP35914 325 aa10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 SERPINB5P36952 375 aa10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 ACAP2Q15057 778 aa10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 OCLNQ16625 522 aa10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 SLC5A9Q2M3M2 681 aa10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 RBM20Q5T481 1227 aaKnown RBP10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 ATXN7L2Q5T6C5 722 aaPredicted RBP10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 ZCCHC23Q6ZST2 131 aa10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 TMEM25Q86YD3 366 aa10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 MFSD6LQ8IWD5 586 aa10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 STK40Q8N2I9 435 aa10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 MICALL1Q8N3F8 863 aa10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 CELF5Q8N6W0 485 aaKnown RBP10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 EFHBQ8N7U6 833 aa10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 OR6Y1Q8NGX8 325 aa10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 NXNL1Q96CM4 212 aa10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 LMLNQ96KR4 655 aa10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 NSMCE3Q96MG7 304 aa10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 TTC1Q99614 292 aa10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 SPSB2Q99619 263 aa10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 GPR63Q9BZJ6 419 aa10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 TM6SF2Q9BZW4 377 aa10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 SUDS3Q9H7L9 328 aaPredicted RBP10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 KCNK13Q9HB14 408 aa10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 SYTL2Q9HCH5 934 aa10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 MARK1Q9P0L2 795 aa10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 MARCH4Q9P2E8 410 aaPredicted RBP10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 HEY2Q9UBP5 337 aa10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 EVLQ9UI08 416 aaPredicted RBP10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 TSR3Q9UJK0 312 aaKnown RBP10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 CCL26Q9Y258 94 aa10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 ZNF711Q9Y462 761 aa10.56□□□□□ -0.72
VIPAS39-203ENST00000448935 OR51F1A6NGY5 319 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 F8W8V4 182 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 SLCO1B7G3V0H7 640 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 CCL22O00626 93 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 TRAFD1O14545 582 aaPredicted RBP10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 AURKAO14965 403 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 BUD23O43709 281 aaKnown RBP10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 UNC5CO95185 931 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 HSPA4LO95757 839 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 PABPC1P11940 636 aaKnown RBP10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 SRCP12931 536 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 TYRP14679 529 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 MYOGP15173 224 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 FDXRP22570 491 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 HLA-FP30511 346 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 SLC8A1P32418 973 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 SUOXP51687 545 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 OXLD1Q5BKU9 147 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 ZNF789Q5FWF6 425 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 CERS6Q6ZMG9 384 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 C10orf67Q8IYJ2 551 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 KIRREL3Q8IZU9 778 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 AHI1Q8N157 1196 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms