RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 RAB44Q7Z6P3 723 aaPredicted RBP12.91□□□□□ -0.34
SHC1-210ENST00000448116 CLYBLQ8N0X4 340 aa12.91□□□□□ -0.34
SHC1-210ENST00000448116 OR2T34Q8NGX1 318 aa12.91□□□□□ -0.34
SHC1-210ENST00000448116 OR2T3Q8NH03 318 aa12.91□□□□□ -0.34
SHC1-210ENST00000448116 FAM81AQ8TBF8 368 aa12.91□□□□□ -0.34
SHC1-210ENST00000448116 PTPN18Q99952 460 aa12.91□□□□□ -0.34
SHC1-210ENST00000448116 KATNAL1Q9BW62 490 aa12.91□□□□□ -0.34
SHC1-210ENST00000448116 SLC2A11Q9BYW1 496 aa12.91□□□□□ -0.34
SHC1-210ENST00000448116 MRM3Q9HC36 420 aaKnown RBP12.91□□□□□ -0.34
SHC1-210ENST00000448116 THEGQ9P2T0 379 aa12.91□□□□□ -0.34
SHC1-210ENST00000448116 TRPV2Q9Y5S1 764 aa12.91□□□□□ -0.34
SHC1-210ENST00000448116 ARL5AQ9Y689 179 aa12.91□□□□□ -0.34
SHC1-210ENST00000448116 RALGAPA2Q2PPJ7 1873 aa12.91□□□□□ -0.34
SHC1-210ENST00000448116 PFDN1O60925 122 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 PRSS56P0CW18 603 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 CES1P23141 567 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 RPL9P32969 192 aaKnown RBP12.9□□□□□ -0.34
SHC1-210ENST00000448116 CLCN2P51788 898 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 TRAP1Q12931 704 aaKnown RBP12.9□□□□□ -0.34
SHC1-210ENST00000448116 FAM110CQ1W6H9 321 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 SLC39A12Q504Y0 691 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 SIRPB2Q5JXA9 342 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 PIK3R6Q5UE93 754 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 CYHR1Q6ZMK1 362 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 LARP4Q71RC2 724 aaKnown RBP eCLIP12.9□□□□□ -0.34
SHC1-210ENST00000448116 DNAJB14Q8TBM8 379 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 ABTB1Q969K4 478 aaPredicted RBP12.9□□□□□ -0.34
SHC1-210ENST00000448116 UBXN10Q96LJ8 280 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 RANBP9Q96S59 729 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 NOL6Q9H6R4 1146 aaKnown RBP12.9□□□□□ -0.34
SHC1-210ENST00000448116 SEMA4BQ9NPR2 832 aaPredicted RBP12.9□□□□□ -0.34
SHC1-210ENST00000448116 TMEM181Q9P2C4 612 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 CD300AQ9UGN4 299 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 FAM50BQ9Y247 325 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 TIMM22Q9Y584 194 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 DNAJC15Q9Y5T4 150 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 NME4O00746 187 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 CLIC3O95833 236 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 MT-ND1P03886 318 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 SLC2A3P11169 496 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 HGFP14210 728 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 CDH2P19022 906 aaPredicted RBP12.9□□□□□ -0.34
SHC1-210ENST00000448116 GPR15P49685 360 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 MAP2K5Q13163 448 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 GALNT3Q14435 633 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 IHHQ14623 411 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 TAF2Q6P1X5 1199 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 TWIST2Q8WVJ9 160 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 CYGBQ8WWM9 190 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 IMP4Q96G21 291 aaKnown RBP12.9□□□□□ -0.34
SHC1-210ENST00000448116 TRIM62Q9BVG3 475 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 OSER1Q9NX31 292 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 CEPT1Q9Y6K0 416 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 DOCK3Q8IZD9 2030 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 TCRBV3S1A0A5B6 114 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 SUPT3HB4E1H0 165 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 SUPT3HO75486 399 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 CDK14O94921 469 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 IGLV3-25P01717 112 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 GNAO1P09471 354 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 NDST2P52849 883 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 YBX1P67809 324 aaKnown RBP12.9□□□□□ -0.34
SHC1-210ENST00000448116 TMCO5AQ8N6Q1 288 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 OR13C4Q8NGS5 318 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 PPP1R2P1Q96PQ5 205 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 SMOC2Q9H3U7 446 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 OLAHQ9NV23 265 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 RHBDL2Q9NX52 303 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 GALNT8Q9NY28 637 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 RSL24D1Q9UHA3 163 aaKnown RBP12.9□□□□□ -0.34
SHC1-210ENST00000448116 GIT1Q9Y2X7 761 aa12.9□□□□□ -0.34
SHC1-210ENST00000448116 GLP2RO95838 553 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 CHRNA1P02708 482 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 GPX3P22352 226 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 TMED1Q13445 227 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 MANEALQ5VSG8 457 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 RAP1GAP2Q684P5 730 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 TTC33Q6PID6 262 aaPredicted RBP12.89□□□□□ -0.35
SHC1-210ENST00000448116 ZC3H15Q8WU90 426 aaKnown RBP12.89□□□□□ -0.35
SHC1-210ENST00000448116 SEMA3CQ99985 751 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 PNPLA3Q9NST1 481 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 HSFX1Q9UBD0 423 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 TSR3Q9UJK0 312 aaKnown RBP12.89□□□□□ -0.35
SHC1-210ENST00000448116 NDUFAF1Q9Y375 327 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 TSC2P49815 1807 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 DHRS12A0PJE2 317 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 H3BMM5 538 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 AZIN1O14977 448 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 INPP4BO15327 924 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 SLC7A4O43246 635 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 GOT2P00505 430 aaKnown RBP12.89□□□□□ -0.35
SHC1-210ENST00000448116 MTHFD1P11586 935 aaKnown RBP12.89□□□□□ -0.35
SHC1-210ENST00000448116 CAPN3P20807 821 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 IL10P22301 178 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 THPOP40225 353 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 ARPP19P56211 112 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 TBX4P57082 545 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 HERVK_113P63132 956 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 PURAQ00577 322 aaKnown RBP12.89□□□□□ -0.35
SHC1-210ENST00000448116 ADRM1Q16186 407 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms