RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 SPARCL1Q14515 664 aa14.08□□□□□ -0.16
SSBP3-208ENST00000444533 INPP5AQ14642 412 aa14.08□□□□□ -0.16
SSBP3-208ENST00000444533 TRIP13Q15645 432 aaPredicted RBP14.08□□□□□ -0.16
SSBP3-208ENST00000444533 KIF19Q2TAC6 998 aa14.08□□□□□ -0.16
SSBP3-208ENST00000444533 INAVAQ3KP66 663 aa14.08□□□□□ -0.16
SSBP3-208ENST00000444533 ESRP1Q6NXG1 681 aaKnown RBP14.08□□□□□ -0.16
SSBP3-208ENST00000444533 PNCKQ6P2M8 343 aa14.08□□□□□ -0.16
SSBP3-208ENST00000444533 GCNT7Q6ZNI0 430 aa14.08□□□□□ -0.16
SSBP3-208ENST00000444533 Q6ZVL8 140 aa14.08□□□□□ -0.16
SSBP3-208ENST00000444533 ZNF765Q7L2R6 523 aa14.08□□□□□ -0.16
SSBP3-208ENST00000444533 KLHL7Q8IXQ5 586 aa14.08□□□□□ -0.16
SSBP3-208ENST00000444533 MINDY1Q8N5J2 469 aa14.08□□□□□ -0.16
SSBP3-208ENST00000444533 TP53I13Q8NBR0 393 aaPredicted RBP14.08□□□□□ -0.16
SSBP3-208ENST00000444533 OR13H1Q8NG92 308 aa14.08□□□□□ -0.16
SSBP3-208ENST00000444533 KIF18AQ8NI77 898 aa14.08□□□□□ -0.16
SSBP3-208ENST00000444533 KLF6Q99612 283 aaPredicted RBP14.08□□□□□ -0.16
SSBP3-208ENST00000444533 FAM83DQ9H4H8 585 aa14.08□□□□□ -0.16
SSBP3-208ENST00000444533 GAREM1Q9H706 876 aa14.08□□□□□ -0.16
SSBP3-208ENST00000444533 ERVMER34-1Q9H9K5 563 aa14.08□□□□□ -0.16
SSBP3-208ENST00000444533 PARD6AQ9NPB6 346 aa14.08□□□□□ -0.16
SSBP3-208ENST00000444533 PHPT1Q9NRX4 125 aaPredicted RBP14.08□□□□□ -0.16
SSBP3-208ENST00000444533 ASIC3Q9UHC3 531 aa14.08□□□□□ -0.16
SSBP3-208ENST00000444533 CA5BQ9Y2D0 317 aa14.08□□□□□ -0.16
SSBP3-208ENST00000444533 SNX11Q9Y5W9 270 aa14.08□□□□□ -0.16
SSBP3-208ENST00000444533 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.08□□□□□ -0.16
SSBP3-208ENST00000444533 TNRC6BQ9UPQ9 1833 aaKnown RBP14.08□□□□□ -0.16
SSBP3-208ENST00000444533 ZFHX2Q9C0A1 2572 aaPredicted RBP14.08□□□□□ -0.16
SSBP3-208ENST00000444533 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.07□□□□□ -0.16
SSBP3-208ENST00000444533 POM121BA6NF01 834 aa14.07□□□□□ -0.16
SSBP3-208ENST00000444533 H0Y8X5 98 aa14.07□□□□□ -0.16
SSBP3-208ENST00000444533 NDC80O14777 642 aa14.07□□□□□ -0.16
SSBP3-208ENST00000444533 STX7O15400 261 aaKnown RBP14.07□□□□□ -0.16
SSBP3-208ENST00000444533 USP12O75317 370 aa14.07□□□□□ -0.16
SSBP3-208ENST00000444533 ZSCAN5DPP0CG00 497 aa14.07□□□□□ -0.16
SSBP3-208ENST00000444533 LPOP22079 712 aaPredicted RBP14.07□□□□□ -0.16
SSBP3-208ENST00000444533 ADRA1AP35348 466 aa14.07□□□□□ -0.16
SSBP3-208ENST00000444533 IGFALSP35858 605 aa14.07□□□□□ -0.16
SSBP3-208ENST00000444533 HMGCLP35914 325 aa14.07□□□□□ -0.16
SSBP3-208ENST00000444533 ADCY8P40145 1251 aa14.07□□□□□ -0.16
SSBP3-208ENST00000444533 SPINT3P49223 89 aa14.07□□□□□ -0.16
SSBP3-208ENST00000444533 CCT8P50990 548 aa14.07□□□□□ -0.16
SSBP3-208ENST00000444533 BLKP51451 505 aa14.07□□□□□ -0.16
SSBP3-208ENST00000444533 NXPH1P58417 271 aa14.07□□□□□ -0.16
SSBP3-208ENST00000444533 DR1Q01658 176 aa14.07□□□□□ -0.16
SSBP3-208ENST00000444533 DPTQ07507 201 aa14.07□□□□□ -0.16
SSBP3-208ENST00000444533 TAF1AQ15573 450 aaPredicted RBP14.07□□□□□ -0.16
SSBP3-208ENST00000444533 HLA-BQ31612 363 aa14.07□□□□□ -0.16
SSBP3-208ENST00000444533 KCTD11Q693B1 232 aa14.07□□□□□ -0.16
SSBP3-208ENST00000444533 TTC27Q6P3X3 843 aa14.07□□□□□ -0.16
SSBP3-208ENST00000444533 LAYNQ6UX15 382 aa14.07□□□□□ -0.16
SSBP3-208ENST00000444533 TMC3Q7Z5M5 1100 aa14.07□□□□□ -0.16
SSBP3-208ENST00000444533 PCGF5Q86SE9 256 aa14.07□□□□□ -0.16
SSBP3-208ENST00000444533 PARGQ86W56 976 aa14.07□□□□□ -0.16
SSBP3-208ENST00000444533 BRSK1Q8TDC3 778 aa14.07□□□□□ -0.16
SSBP3-208ENST00000444533 NETO1Q8TDF5 533 aa14.07□□□□□ -0.16
SSBP3-208ENST00000444533 BMFQ96LC9 184 aa14.07□□□□□ -0.16
SSBP3-208ENST00000444533 APOOQ9BUR5 198 aa14.07□□□□□ -0.16
SSBP3-208ENST00000444533 SPATA16Q9BXB7 569 aa14.07□□□□□ -0.16
SSBP3-208ENST00000444533 DDX47Q9H0S4 455 aaKnown RBP14.07□□□□□ -0.16
SSBP3-208ENST00000444533 ARNT2Q9HBZ2 717 aa14.07□□□□□ -0.16
SSBP3-208ENST00000444533 EIF2B3Q9NR50 452 aaKnown RBP14.07□□□□□ -0.16
SSBP3-208ENST00000444533 MBNL1Q9NR56 388 aaKnown RBP14.07□□□□□ -0.16
SSBP3-208ENST00000444533 PCYOX1Q9UHG3 505 aa14.07□□□□□ -0.16
SSBP3-208ENST00000444533 CD84Q9UIB8 345 aa14.07□□□□□ -0.16
SSBP3-208ENST00000444533 CDV3Q9UKY7 258 aaKnown RBP14.07□□□□□ -0.16
SSBP3-208ENST00000444533 GPR179Q6PRD1 2367 aa14.07□□□□□ -0.16
SSBP3-208ENST00000444533 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.06□□□□□ -0.16
SSBP3-208ENST00000444533 WNT1P04628 370 aa14.06□□□□□ -0.16
SSBP3-208ENST00000444533 C1SP09871 688 aa14.06□□□□□ -0.16
SSBP3-208ENST00000444533 HADHAP40939 763 aa14.06□□□□□ -0.16
SSBP3-208ENST00000444533 CTSKP43235 329 aa14.06□□□□□ -0.16
SSBP3-208ENST00000444533 DCDC1P59894 354 aa14.06□□□□□ -0.16
SSBP3-208ENST00000444533 PFN3P60673 137 aa14.06□□□□□ -0.16
SSBP3-208ENST00000444533 SEPT6Q14141 434 aa14.06□□□□□ -0.16
SSBP3-208ENST00000444533 DHX34Q14147 1143 aaKnown RBP14.06□□□□□ -0.16
SSBP3-208ENST00000444533 PTPRRQ15256 657 aa14.06□□□□□ -0.16
SSBP3-208ENST00000444533 UAP1L1Q3KQV9 507 aa14.06□□□□□ -0.16
SSBP3-208ENST00000444533 MAATS1Q7Z4T9 603 aa14.06□□□□□ -0.16
SSBP3-208ENST00000444533 TECPR1Q7Z6L1 1165 aa14.06□□□□□ -0.16
SSBP3-208ENST00000444533 NLRP8Q86W28 1048 aa14.06□□□□□ -0.16
SSBP3-208ENST00000444533 KLHDC8BQ8IXV7 354 aa14.06□□□□□ -0.16
SSBP3-208ENST00000444533 MNS1Q8NEH6 495 aa14.06□□□□□ -0.16
SSBP3-208ENST00000444533 BTN2A2Q8WVV5 523 aa14.06□□□□□ -0.16
SSBP3-208ENST00000444533 ELF4Q99607 663 aaPredicted RBP14.06□□□□□ -0.16
SSBP3-208ENST00000444533 GORASP1Q9BQQ3 440 aa14.06□□□□□ -0.16
SSBP3-208ENST00000444533 ZSCAN5AQ9BUG6 496 aa14.06□□□□□ -0.16
SSBP3-208ENST00000444533 ABCG8Q9H221 673 aa14.06□□□□□ -0.16
SSBP3-208ENST00000444533 FSCN3Q9NQT6 498 aa14.06□□□□□ -0.16
SSBP3-208ENST00000444533 DNAJC28Q9NX36 388 aa14.06□□□□□ -0.16
SSBP3-208ENST00000444533 OR1A2Q9Y585 309 aa14.06□□□□□ -0.16
SSBP3-208ENST00000444533 SLCO1B1Q9Y6L6 691 aa14.06□□□□□ -0.16
SSBP3-208ENST00000444533 OTOGLQ3ZCN5 2332 aa14.06□□□□□ -0.16
SSBP3-208ENST00000444533 SPTY2D1-AS1A0A0U1RR47 76 aa14.05□□□□□ -0.16
SSBP3-208ENST00000444533 SUN1O94901 812 aa14.05□□□□□ -0.16
SSBP3-208ENST00000444533 HOXC4P09017 264 aaPredicted RBP14.05□□□□□ -0.16
SSBP3-208ENST00000444533 TGM1P22735 817 aa14.05□□□□□ -0.16
SSBP3-208ENST00000444533 TEAD1P28347 426 aa14.05□□□□□ -0.16
SSBP3-208ENST00000444533 SPAM1P38567 509 aa14.05□□□□□ -0.16
SSBP3-208ENST00000444533 LIMK1P53667 647 aa14.05□□□□□ -0.16
SSBP3-208ENST00000444533 HNRNPKP61978 463 aaKnown RBP eCLIP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms