RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 CA4P22748 312 aa16.3■□□□□ 0.2
CTDSP1-204ENST00000443891 SLC5A2P31639 672 aa16.3■□□□□ 0.2
CTDSP1-204ENST00000443891 GPR3P46089 330 aa16.3■□□□□ 0.2
CTDSP1-204ENST00000443891 CDK3Q00526 305 aa16.3■□□□□ 0.2
CTDSP1-204ENST00000443891 FANCCQ00597 558 aa16.3■□□□□ 0.2
CTDSP1-204ENST00000443891 TRAF2Q12933 501 aa16.3■□□□□ 0.2
CTDSP1-204ENST00000443891 KRT81Q14533 505 aa16.3■□□□□ 0.2
CTDSP1-204ENST00000443891 CCDC122Q5T0U0 273 aa16.3■□□□□ 0.2
CTDSP1-204ENST00000443891 KCTD16Q68DU8 428 aa16.3■□□□□ 0.2
CTDSP1-204ENST00000443891 CAVIN1Q6NZI2 390 aaKnown RBP16.3■□□□□ 0.2
CTDSP1-204ENST00000443891 ZNF765Q7L2R6 523 aa16.3■□□□□ 0.2
CTDSP1-204ENST00000443891 TECPR1Q7Z6L1 1165 aa16.3■□□□□ 0.2
CTDSP1-204ENST00000443891 ZNF605Q86T29 641 aa16.3■□□□□ 0.2
CTDSP1-204ENST00000443891 MAP7D3Q8IWC1 876 aa16.3■□□□□ 0.2
CTDSP1-204ENST00000443891 PIH1D2Q8WWB5 315 aa16.3■□□□□ 0.2
CTDSP1-204ENST00000443891 TTC9Q92623 222 aa16.3■□□□□ 0.2
CTDSP1-204ENST00000443891 SCARF2Q96GP6 870 aaPredicted RBP16.3■□□□□ 0.2
CTDSP1-204ENST00000443891 NUP85Q9BW27 656 aa16.3■□□□□ 0.2
CTDSP1-204ENST00000443891 SEPT10Q9P0V9 454 aa16.3■□□□□ 0.2
CTDSP1-204ENST00000443891 LUC7L2Q9Y383 392 aaKnown RBP16.3■□□□□ 0.2
CTDSP1-204ENST00000443891 LOXL2Q9Y4K0 774 aa16.3■□□□□ 0.2
CTDSP1-204ENST00000443891 RNF215Q9Y6U7 377 aa16.3■□□□□ 0.2
CTDSP1-204ENST00000443891 A8MX80 341 aa16.29■□□□□ 0.2
CTDSP1-204ENST00000443891 B4DGG1 531 aa16.29■□□□□ 0.2
CTDSP1-204ENST00000443891 HGSO14964 777 aaPredicted RBP16.29■□□□□ 0.2
CTDSP1-204ENST00000443891 MATN3O15232 486 aa16.29■□□□□ 0.2
CTDSP1-204ENST00000443891 CPNE6O95741 557 aa16.29■□□□□ 0.2
CTDSP1-204ENST00000443891 PRB1P04280 392 aa16.29■□□□□ 0.2
CTDSP1-204ENST00000443891 LIPCP11150 499 aa16.29■□□□□ 0.2
CTDSP1-204ENST00000443891 TCF4P15884 667 aa16.29■□□□□ 0.2
CTDSP1-204ENST00000443891 LHCGRP22888 699 aa16.29■□□□□ 0.2
CTDSP1-204ENST00000443891 IL4RP24394 825 aa16.29■□□□□ 0.2
CTDSP1-204ENST00000443891 CCNCP24863 283 aa16.29■□□□□ 0.2
CTDSP1-204ENST00000443891 ETV3P41162 512 aa16.29■□□□□ 0.2
CTDSP1-204ENST00000443891 GARSP41250 739 aaKnown RBP16.29■□□□□ 0.2
CTDSP1-204ENST00000443891 UBASH3AP57075 661 aa16.29■□□□□ 0.2
CTDSP1-204ENST00000443891 RPL26P61254 145 aaKnown RBP16.29■□□□□ 0.2
CTDSP1-204ENST00000443891 B4GALNT1Q00973 533 aa16.29■□□□□ 0.2
CTDSP1-204ENST00000443891 SQSTM1Q13501 440 aa16.29■□□□□ 0.2
CTDSP1-204ENST00000443891 PAFAH1B3Q15102 231 aaKnown RBP16.29■□□□□ 0.2
CTDSP1-204ENST00000443891 PDK2Q15119 407 aa16.29■□□□□ 0.2
CTDSP1-204ENST00000443891 IFI16Q16666 785 aaKnown RBP16.29■□□□□ 0.2
CTDSP1-204ENST00000443891 RAET1GQ6H3X3 334 aa16.29■□□□□ 0.2
CTDSP1-204ENST00000443891 ALKBH5Q6P6C2 394 aaKnown RBP16.29■□□□□ 0.2
CTDSP1-204ENST00000443891 PIM3Q86V86 326 aa16.29■□□□□ 0.2
CTDSP1-204ENST00000443891 SLITRK4Q8IW52 837 aa16.29■□□□□ 0.2
CTDSP1-204ENST00000443891 ZDHHC1Q8WTX9 485 aa16.29■□□□□ 0.2
CTDSP1-204ENST00000443891 MAML1Q92585 1016 aa16.29■□□□□ 0.2
CTDSP1-204ENST00000443891 TSGA13Q96PP4 275 aa16.29■□□□□ 0.2
CTDSP1-204ENST00000443891 ZNF670Q9BS34 389 aa16.29■□□□□ 0.2
CTDSP1-204ENST00000443891 FOXP3Q9BZS1 431 aa16.29■□□□□ 0.2
CTDSP1-204ENST00000443891 CDH19Q9H159 772 aa16.29■□□□□ 0.2
CTDSP1-204ENST00000443891 RPL26L1Q9UNX3 145 aaKnown RBP16.29■□□□□ 0.2
CTDSP1-204ENST00000443891 NPIPB15A6NHN6 443 aaPredicted RBP16.28■□□□□ 0.2
CTDSP1-204ENST00000443891 RHPN2P1A8MT19 583 aa16.28■□□□□ 0.2
CTDSP1-204ENST00000443891 FGF1P05230 155 aa16.28■□□□□ 0.2
CTDSP1-204ENST00000443891 MX2P20592 715 aa16.28■□□□□ 0.2
CTDSP1-204ENST00000443891 MAXP61244 160 aa16.28■□□□□ 0.2
CTDSP1-204ENST00000443891 GALNT2Q10471 571 aa16.28■□□□□ 0.2
CTDSP1-204ENST00000443891 TRA2AQ13595 282 aaKnown RBP eCLIP16.28■□□□□ 0.2
CTDSP1-204ENST00000443891 LRP8Q14114 963 aa16.28■□□□□ 0.2
CTDSP1-204ENST00000443891 TCEA2Q15560 299 aa16.28■□□□□ 0.2
CTDSP1-204ENST00000443891 TMEM164Q5U3C3 297 aa16.28■□□□□ 0.2
CTDSP1-204ENST00000443891 ADAMTSL4Q6UY14 1074 aa16.28■□□□□ 0.2
CTDSP1-204ENST00000443891 NYAP1Q6ZVC0 841 aa16.28■□□□□ 0.2
CTDSP1-204ENST00000443891 Q6ZVL8 140 aa16.28■□□□□ 0.2
CTDSP1-204ENST00000443891 HSD11B1LQ7Z5J1 315 aa16.28■□□□□ 0.2
CTDSP1-204ENST00000443891 NRROSQ86YC3 692 aa16.28■□□□□ 0.2
CTDSP1-204ENST00000443891 NRSN1Q8IZ57 195 aa16.28■□□□□ 0.2
CTDSP1-204ENST00000443891 PELI3Q8N2H9 469 aa16.28■□□□□ 0.2
CTDSP1-204ENST00000443891 Q8N9G6 341 aaPredicted RBP16.28■□□□□ 0.2
CTDSP1-204ENST00000443891 SEMA3CQ99985 751 aa16.28■□□□□ 0.2
CTDSP1-204ENST00000443891 NT5MQ9NPB1 228 aa16.28■□□□□ 0.2
CTDSP1-204ENST00000443891 TAAR2Q9P1P5 351 aa16.28■□□□□ 0.2
CTDSP1-204ENST00000443891 UVRAGQ9P2Y5 699 aa16.28■□□□□ 0.2
CTDSP1-204ENST00000443891 SUFUQ9UMX1 484 aa16.28■□□□□ 0.2
CTDSP1-204ENST00000443891 A0A087X0T9 212 aa16.27■□□□□ 0.2
CTDSP1-204ENST00000443891 A0A0J9YYE9 177 aa16.27■□□□□ 0.2
CTDSP1-204ENST00000443891 TTC24A2A3L6 582 aaPredicted RBP16.27■□□□□ 0.2
CTDSP1-204ENST00000443891 PMS2P1A4D2B8 440 aa16.27■□□□□ 0.2
CTDSP1-204ENST00000443891 CASC3O15234 703 aaKnown RBP16.27■□□□□ 0.2
CTDSP1-204ENST00000443891 TRBC1P01850 177 aa16.27■□□□□ 0.2
CTDSP1-204ENST00000443891 KRT7P08729 469 aa16.27■□□□□ 0.2
CTDSP1-204ENST00000443891 FAM228BP0C875 321 aa16.27■□□□□ 0.2
CTDSP1-204ENST00000443891 GPR1P46091 355 aa16.27■□□□□ 0.2
CTDSP1-204ENST00000443891 ARSEP51690 589 aa16.27■□□□□ 0.2
CTDSP1-204ENST00000443891 EPHB1P54762 984 aa16.27■□□□□ 0.2
CTDSP1-204ENST00000443891 BIRC2Q13490 618 aa16.27■□□□□ 0.2
CTDSP1-204ENST00000443891 ZSCAN23Q3MJ62 389 aa16.27■□□□□ 0.2
CTDSP1-204ENST00000443891 DENND2CQ68D51 928 aa16.27■□□□□ 0.2
CTDSP1-204ENST00000443891 TXNRD3NBQ6F5E7 133 aa16.27■□□□□ 0.2
CTDSP1-204ENST00000443891 JAMLQ86YT9 394 aa16.27■□□□□ 0.2
CTDSP1-204ENST00000443891 CCL4L1Q8NHW4 92 aa16.27■□□□□ 0.2
CTDSP1-204ENST00000443891 ZNF564Q8TBZ8 553 aaPredicted RBP16.27■□□□□ 0.2
CTDSP1-204ENST00000443891 AP2M1Q96CW1 435 aa16.27■□□□□ 0.2
CTDSP1-204ENST00000443891 LYSMD1Q96S90 227 aa16.27■□□□□ 0.2
CTDSP1-204ENST00000443891 CBX8Q9HC52 389 aa16.27■□□□□ 0.2
CTDSP1-204ENST00000443891 SPATS2LQ9NUQ6 558 aaKnown RBP16.27■□□□□ 0.2
CTDSP1-204ENST00000443891 PISDQ9UG56 409 aa16.27■□□□□ 0.2
CTDSP1-204ENST00000443891 ANKRD36A6QL64 1941 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms