RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 ESRP1Q6NXG1 681 aaKnown RBP8.78□□□□□ -1
USP6NL-203ENST00000443016 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.78□□□□□ -1
USP6NL-203ENST00000443016 KIF18AQ8NI77 898 aa8.78□□□□□ -1
USP6NL-203ENST00000443016 HNRNPLLQ8WVV9 542 aaKnown RBP8.78□□□□□ -1
USP6NL-203ENST00000443016 TSACCQ96A04 125 aaPredicted RBP8.78□□□□□ -1
USP6NL-203ENST00000443016 LRRC61Q9BV99 259 aa8.78□□□□□ -1
USP6NL-203ENST00000443016 NRSN2Q9GZP1 204 aa8.78□□□□□ -1
USP6NL-203ENST00000443016 MOSPD1Q9UJG1 213 aa8.78□□□□□ -1
USP6NL-203ENST00000443016 BPTFQ12830 3046 aa8.78□□□□□ -1
USP6NL-203ENST00000443016 A0A1W2PQ67 120 aa8.78□□□□□ -1
USP6NL-203ENST00000443016 DYTNA2CJ06 578 aa8.78□□□□□ -1
USP6NL-203ENST00000443016 CCDC66A2RUB6 948 aa8.78□□□□□ -1
USP6NL-203ENST00000443016 CACNB4O00305 520 aaPredicted RBP8.78□□□□□ -1
USP6NL-203ENST00000443016 PSTPIP1O43586 416 aa8.78□□□□□ -1
USP6NL-203ENST00000443016 OPA1O60313 960 aa8.78□□□□□ -1
USP6NL-203ENST00000443016 MAFKO60675 156 aa8.78□□□□□ -1
USP6NL-203ENST00000443016 FTCDO95954 541 aa8.78□□□□□ -1
USP6NL-203ENST00000443016 KRT7P08729 469 aa8.78□□□□□ -1
USP6NL-203ENST00000443016 CD48P09326 243 aa8.78□□□□□ -1
USP6NL-203ENST00000443016 COMTP21964 271 aa8.78□□□□□ -1
USP6NL-203ENST00000443016 MMRN1Q13201 1228 aa8.78□□□□□ -1
USP6NL-203ENST00000443016 NFATC4Q14934 902 aa8.78□□□□□ -1
USP6NL-203ENST00000443016 RPS6KA1Q15418 735 aa8.78□□□□□ -1
USP6NL-203ENST00000443016 NR0B2Q15466 257 aa8.78□□□□□ -1
USP6NL-203ENST00000443016 SYT10Q6XYQ8 523 aa8.78□□□□□ -1
USP6NL-203ENST00000443016 RHOT1Q8IXI2 618 aa8.78□□□□□ -1
USP6NL-203ENST00000443016 DCBLD1Q8N8Z6 715 aa8.78□□□□□ -1
USP6NL-203ENST00000443016 ECHDC3Q96DC8 303 aa8.78□□□□□ -1
USP6NL-203ENST00000443016 APOOQ9BUR5 198 aa8.78□□□□□ -1
USP6NL-203ENST00000443016 SYNDIG1Q9H7V2 258 aa8.78□□□□□ -1
USP6NL-203ENST00000443016 NOD2Q9HC29 1040 aa8.78□□□□□ -1
USP6NL-203ENST00000443016 HAUS2Q9NVX0 235 aa8.78□□□□□ -1
USP6NL-203ENST00000443016 RCOR3Q9P2K3 495 aaPredicted RBP8.78□□□□□ -1
USP6NL-203ENST00000443016 GULP1Q9UBP9 304 aa8.78□□□□□ -1
USP6NL-203ENST00000443016 KLQ9UEF7 1012 aa8.78□□□□□ -1
USP6NL-203ENST00000443016 VTI1BQ9UEU0 232 aa8.78□□□□□ -1
USP6NL-203ENST00000443016 GPSM3Q9Y4H4 160 aa8.78□□□□□ -1
USP6NL-203ENST00000443016 ALG6Q9Y672 507 aa8.78□□□□□ -1
USP6NL-203ENST00000443016 GOLGA6CA6NDK9 693 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 GOLGA6BA6NDN3 693 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 TRAFD1O14545 582 aaPredicted RBP8.77□□□□□ -1.01
USP6NL-203ENST00000443016 YY2O15391 372 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 SOCS5O75159 536 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 RASGRP1O95267 797 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 MAP3K6O95382 1288 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 ALPIP09923 528 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 GOLGA6DP0CG33 693 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 KRT10P13645 584 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 MTM1Q13496 603 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 ATP13A4Q4VNC1 1196 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 ICE2Q659A1 982 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 GUSBP11Q6P575 273 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 CRTC1Q6UUV9 634 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 LIPIQ6XZB0 460 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 EFL1Q7Z2Z2 1120 aaKnown RBP8.77□□□□□ -1.01
USP6NL-203ENST00000443016 NT5DC3Q86UY8 548 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 LRRC49Q8IUZ0 686 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 FSTL5Q8N475 847 aaPredicted RBP8.77□□□□□ -1.01
USP6NL-203ENST00000443016 WDR92Q96MX6 357 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 DEPDC7Q96QD5 511 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 NUDCD1Q96RS6 583 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 NT5MQ9NPB1 228 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 ENAMQ9NRM1 1142 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 GOLGA6AQ9NYA3 693 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 B4GALT6Q9UBX8 382 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 PNMA8BQ9ULN7 279 aaPredicted RBP8.77□□□□□ -1.01
USP6NL-203ENST00000443016 HYOU1Q9Y4L1 999 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 FASNP49327 2511 aaKnown RBP8.77□□□□□ -1.01
USP6NL-203ENST00000443016 IFRD1O00458 451 aaPredicted RBP8.77□□□□□ -1.01
USP6NL-203ENST00000443016 RRP8O43159 456 aaKnown RBP8.77□□□□□ -1.01
USP6NL-203ENST00000443016 CPP00450 1065 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 KELP23276 732 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 CETN2P41208 172 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 SRP54P61011 504 aaKnown RBP8.77□□□□□ -1.01
USP6NL-203ENST00000443016 ARHGEF7Q14155 803 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 AGERQ15109 404 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 ALG11Q2TAA5 492 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 COL28A1Q2UY09 1125 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 C6orf132Q5T0Z8 1188 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 ARMC12Q5T9G4 340 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 MEI1Q5TIA1 1274 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 LRRC69Q6ZNQ3 347 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 DPPA4Q7L190 304 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 NDUFAF2Q8N183 169 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 PLA2G15Q8NCC3 412 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 NAT6Q93015 286 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 MGME1Q9BQP7 344 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 POLR1EQ9GZS1 481 aaKnown RBP8.77□□□□□ -1.01
USP6NL-203ENST00000443016 WDR26Q9H7D7 661 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 PPCSQ9HAB8 311 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 SIRPGQ9P1W8 387 aa8.77□□□□□ -1.01
USP6NL-203ENST00000443016 EME2A4GXA9 379 aaPredicted RBP8.76□□□□□ -1.01
USP6NL-203ENST00000443016 PDE2AO00408 941 aaPredicted RBP8.76□□□□□ -1.01
USP6NL-203ENST00000443016 MFSD11O43934 449 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 USP12O75317 370 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 BPNT1O95861 308 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 PEX11BO96011 259 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 TNFP01375 233 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 CYP2A6P11509 494 aaPredicted RBP8.76□□□□□ -1.01
USP6NL-203ENST00000443016 TCP1P17987 556 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms