RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 DFNA5O60443 496 aa12.31□□□□□ -0.44
USP1-203ENST00000442679 USP12O75317 370 aa12.31□□□□□ -0.44
USP1-203ENST00000442679 SLC4A1P02730 911 aa12.31□□□□□ -0.44
USP1-203ENST00000442679 COILP38432 576 aaPredicted RBP12.31□□□□□ -0.44
USP1-203ENST00000442679 SPINT3P49223 89 aa12.31□□□□□ -0.44
USP1-203ENST00000442679 LMAN1P49257 510 aa12.31□□□□□ -0.44
USP1-203ENST00000442679 THOP1P52888 689 aa12.31□□□□□ -0.44
USP1-203ENST00000442679 LIMK1P53667 647 aa12.31□□□□□ -0.44
USP1-203ENST00000442679 MTM1Q13496 603 aa12.31□□□□□ -0.44
USP1-203ENST00000442679 PDE1CQ14123 709 aaPredicted RBP12.31□□□□□ -0.44
USP1-203ENST00000442679 CYP1B1Q16678 543 aa12.31□□□□□ -0.44
USP1-203ENST00000442679 RSPO4Q2I0M5 234 aaPredicted RBP12.31□□□□□ -0.44
USP1-203ENST00000442679 KCTD11Q693B1 232 aa12.31□□□□□ -0.44
USP1-203ENST00000442679 ESRP1Q6NXG1 681 aaKnown RBP12.31□□□□□ -0.44
USP1-203ENST00000442679 C4orf22Q6V702 233 aa12.31□□□□□ -0.44
USP1-203ENST00000442679 SYT10Q6XYQ8 523 aa12.31□□□□□ -0.44
USP1-203ENST00000442679 TMC3Q7Z5M5 1100 aa12.31□□□□□ -0.44
USP1-203ENST00000442679 CREG2Q8IUH2 290 aa12.31□□□□□ -0.44
USP1-203ENST00000442679 RAVER1Q8IY67 606 aaKnown RBP12.31□□□□□ -0.44
USP1-203ENST00000442679 SLC22A18ASQ8N1D0 253 aa12.31□□□□□ -0.44
USP1-203ENST00000442679 PDCD7Q8N8D1 485 aaKnown RBP12.31□□□□□ -0.44
USP1-203ENST00000442679 BLOC1S5Q8TDH9 187 aa12.31□□□□□ -0.44
USP1-203ENST00000442679 AP2M1Q96CW1 435 aa12.31□□□□□ -0.44
USP1-203ENST00000442679 ELF4Q99607 663 aaPredicted RBP12.31□□□□□ -0.44
USP1-203ENST00000442679 APOOQ9BUR5 198 aa12.31□□□□□ -0.44
USP1-203ENST00000442679 TRABDQ9H4I3 376 aa12.31□□□□□ -0.44
USP1-203ENST00000442679 LRRC40Q9H9A6 602 aa12.31□□□□□ -0.44
USP1-203ENST00000442679 RAB6BQ9NRW1 208 aa12.31□□□□□ -0.44
USP1-203ENST00000442679 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.31□□□□□ -0.44
USP1-203ENST00000442679 PKD2L2Q9NZM6 624 aa12.31□□□□□ -0.44
USP1-203ENST00000442679 HACD3Q9P035 362 aa12.31□□□□□ -0.44
USP1-203ENST00000442679 CDV3Q9UKY7 258 aaKnown RBP12.31□□□□□ -0.44
USP1-203ENST00000442679 FNDC3AQ9Y2H6 1198 aaKnown RBP12.31□□□□□ -0.44
USP1-203ENST00000442679 OR1A2Q9Y585 309 aa12.31□□□□□ -0.44
USP1-203ENST00000442679 SPTY2D1-AS1A0A0U1RR47 76 aa12.3□□□□□ -0.44
USP1-203ENST00000442679 A0A1B0GTQ1 180 aa12.3□□□□□ -0.44
USP1-203ENST00000442679 E7EVH7 732 aa12.3□□□□□ -0.44
USP1-203ENST00000442679 K7ESM1 405 aa12.3□□□□□ -0.44
USP1-203ENST00000442679 AURKAO14965 403 aa12.3□□□□□ -0.44
USP1-203ENST00000442679 PHF2O75151 1096 aa12.3□□□□□ -0.44
USP1-203ENST00000442679 AP2A1O95782 977 aa12.3□□□□□ -0.44
USP1-203ENST00000442679 SDHBP21912 280 aa12.3□□□□□ -0.44
USP1-203ENST00000442679 TRIM23P36406 574 aa12.3□□□□□ -0.44
USP1-203ENST00000442679 PAFAH1B1P43034 410 aa12.3□□□□□ -0.44
USP1-203ENST00000442679 ARRB1P49407 418 aaPredicted RBP12.3□□□□□ -0.44
USP1-203ENST00000442679 DPTQ07507 201 aa12.3□□□□□ -0.44
USP1-203ENST00000442679 PTK2BQ14289 1009 aa12.3□□□□□ -0.44
USP1-203ENST00000442679 FZD2Q14332 565 aa12.3□□□□□ -0.44
USP1-203ENST00000442679 TRIP13Q15645 432 aaPredicted RBP12.3□□□□□ -0.44
USP1-203ENST00000442679 TPRG1LQ5T0D9 272 aa12.3□□□□□ -0.44
USP1-203ENST00000442679 RAET1GQ6H3X3 334 aa12.3□□□□□ -0.44
USP1-203ENST00000442679 DENND5AQ6IQ26 1287 aa12.3□□□□□ -0.44
USP1-203ENST00000442679 CCDC137Q6PK04 289 aaKnown RBP12.3□□□□□ -0.44
USP1-203ENST00000442679 ZNF765Q7L2R6 523 aa12.3□□□□□ -0.44
USP1-203ENST00000442679 NLRP8Q86W28 1048 aa12.3□□□□□ -0.44
USP1-203ENST00000442679 PELI3Q8N2H9 469 aa12.3□□□□□ -0.44
USP1-203ENST00000442679 OXR1Q8N573 874 aa12.3□□□□□ -0.44
USP1-203ENST00000442679 SCAMP4Q969E2 229 aa12.3□□□□□ -0.44
USP1-203ENST00000442679 EID2BQ96D98 161 aa12.3□□□□□ -0.44
USP1-203ENST00000442679 RIOK2Q9BVS4 552 aaKnown RBP12.3□□□□□ -0.44
USP1-203ENST00000442679 FAM83DQ9H4H8 585 aa12.3□□□□□ -0.44
USP1-203ENST00000442679 ARNT2Q9HBZ2 717 aa12.3□□□□□ -0.44
USP1-203ENST00000442679 GPR27Q9NS67 375 aa12.3□□□□□ -0.44
USP1-203ENST00000442679 TM7SF3Q9NS93 570 aa12.3□□□□□ -0.44
USP1-203ENST00000442679 FEZ2Q9UHY8 353 aaPredicted RBP12.3□□□□□ -0.44
USP1-203ENST00000442679 FAM186AA6NE01 2351 aa12.29□□□□□ -0.44
USP1-203ENST00000442679 PCDH15Q96QU1 1955 aa12.29□□□□□ -0.44
USP1-203ENST00000442679 TRPM6Q9BX84 2022 aa12.29□□□□□ -0.44
USP1-203ENST00000442679 ERI2A8K979 691 aaKnown RBP12.29□□□□□ -0.44
USP1-203ENST00000442679 CACNB4O00305 520 aaPredicted RBP12.29□□□□□ -0.44
USP1-203ENST00000442679 SLC30A4O14863 429 aa12.29□□□□□ -0.44
USP1-203ENST00000442679 KRT14P02533 472 aa12.29□□□□□ -0.44
USP1-203ENST00000442679 HOXC4P09017 264 aaPredicted RBP12.29□□□□□ -0.44
USP1-203ENST00000442679 ZNF883P0CG24 379 aa12.29□□□□□ -0.44
USP1-203ENST00000442679 TSHRP16473 764 aa12.29□□□□□ -0.44
USP1-203ENST00000442679 HTR1BP28222 390 aa12.29□□□□□ -0.44
USP1-203ENST00000442679 GPR1P46091 355 aa12.29□□□□□ -0.44
USP1-203ENST00000442679 RXRGP48443 463 aa12.29□□□□□ -0.44
USP1-203ENST00000442679 FNTAP49354 379 aa12.29□□□□□ -0.44
USP1-203ENST00000442679 IL9RQ01113 521 aa12.29□□□□□ -0.44
USP1-203ENST00000442679 SLC14A1Q13336 389 aa12.29□□□□□ -0.44
USP1-203ENST00000442679 SEMA5AQ13591 1074 aa12.29□□□□□ -0.44
USP1-203ENST00000442679 NFATC4Q14934 902 aa12.29□□□□□ -0.44
USP1-203ENST00000442679 SUZ12Q15022 739 aaKnown RBP12.29□□□□□ -0.44
USP1-203ENST00000442679 SHBQ15464 509 aa12.29□□□□□ -0.44
USP1-203ENST00000442679 KCTD19Q17RG1 926 aaPredicted RBP12.29□□□□□ -0.44
USP1-203ENST00000442679 ZNF542PQ5EBM4 170 aa12.29□□□□□ -0.44
USP1-203ENST00000442679 NYAP1Q6ZVC0 841 aa12.29□□□□□ -0.44
USP1-203ENST00000442679 GLT6D1Q7Z4J2 308 aa12.29□□□□□ -0.44
USP1-203ENST00000442679 LINC00523Q86TU6 105 aa12.29□□□□□ -0.44
USP1-203ENST00000442679 TTC30BQ8N4P2 665 aa12.29□□□□□ -0.44
USP1-203ENST00000442679 FUBP1Q96AE4 644 aaKnown RBP12.29□□□□□ -0.44
USP1-203ENST00000442679 WDR26Q9H7D7 661 aa12.29□□□□□ -0.44
USP1-203ENST00000442679 BPIFA1Q9NP55 256 aa12.29□□□□□ -0.44
USP1-203ENST00000442679 RAD18Q9NS91 495 aa12.29□□□□□ -0.44
USP1-203ENST00000442679 DNAJC28Q9NX36 388 aa12.29□□□□□ -0.44
USP1-203ENST00000442679 RNF14Q9UBS8 474 aa12.29□□□□□ -0.44
USP1-203ENST00000442679 RALGAPA1Q6GYQ0 2036 aa12.28□□□□□ -0.44
USP1-203ENST00000442679 PTPRZ1P23471 2315 aaPredicted RBP12.28□□□□□ -0.44
USP1-203ENST00000442679 C2orf81A6NN90 581 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms