RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 CDH19Q9H159 772 aa11.77□□□□□ -0.53
TTC28-203ENST00000442232 CBX8Q9HC52 389 aa11.77□□□□□ -0.53
TTC28-203ENST00000442232 LCMT1Q9UIC8 334 aa11.77□□□□□ -0.53
TTC28-203ENST00000442232 LOXL2Q9Y4K0 774 aa11.77□□□□□ -0.53
TTC28-203ENST00000442232 PCDHGA7Q9Y5G6 932 aa11.77□□□□□ -0.53
TTC28-203ENST00000442232 RNF215Q9Y6U7 377 aa11.77□□□□□ -0.53
TTC28-203ENST00000442232 SCN8AQ9UQD0 1980 aa11.77□□□□□ -0.53
TTC28-203ENST00000442232 ZFC3H1O60293 1989 aaKnown RBP11.76□□□□□ -0.53
TTC28-203ENST00000442232 A0A1W2PQM1 296 aa11.76□□□□□ -0.53
TTC28-203ENST00000442232 PMS2P1A4D2B8 440 aa11.76□□□□□ -0.53
TTC28-203ENST00000442232 NPIPB15A6NHN6 443 aaPredicted RBP11.76□□□□□ -0.53
TTC28-203ENST00000442232 NOBOXO60393 691 aa11.76□□□□□ -0.53
TTC28-203ENST00000442232 CYP1A2P05177 515 aa11.76□□□□□ -0.53
TTC28-203ENST00000442232 ZNF30P17039 623 aa11.76□□□□□ -0.53
TTC28-203ENST00000442232 CTPS1P17812 591 aa11.76□□□□□ -0.53
TTC28-203ENST00000442232 GM2AP17900 193 aa11.76□□□□□ -0.53
TTC28-203ENST00000442232 CES1P23141 567 aa11.76□□□□□ -0.53
TTC28-203ENST00000442232 TEAD1P28347 426 aa11.76□□□□□ -0.53
TTC28-203ENST00000442232 PPM1FP49593 454 aaPredicted RBP11.76□□□□□ -0.53
TTC28-203ENST00000442232 HLTFQ14527 1009 aaKnown RBP eCLIP11.76□□□□□ -0.53
TTC28-203ENST00000442232 KCTD16Q68DU8 428 aa11.76□□□□□ -0.53
TTC28-203ENST00000442232 ALKBH5Q6P6C2 394 aaKnown RBP11.76□□□□□ -0.53
TTC28-203ENST00000442232 OGFOD3Q6PK18 319 aa11.76□□□□□ -0.53
TTC28-203ENST00000442232 DOK6Q6PKX4 331 aa11.76□□□□□ -0.53
TTC28-203ENST00000442232 NYAP1Q6ZVC0 841 aa11.76□□□□□ -0.53
TTC28-203ENST00000442232 LUZP1Q86V48 1076 aa11.76□□□□□ -0.53
TTC28-203ENST00000442232 PGBD5Q8N414 524 aa11.76□□□□□ -0.53
TTC28-203ENST00000442232 KCTD6Q8NC69 237 aa11.76□□□□□ -0.53
TTC28-203ENST00000442232 ZNF564Q8TBZ8 553 aaPredicted RBP11.76□□□□□ -0.53
TTC28-203ENST00000442232 ZDHHC1Q8WTX9 485 aa11.76□□□□□ -0.53
TTC28-203ENST00000442232 CTNNBL1Q8WYA6 563 aaPredicted RBP11.76□□□□□ -0.53
TTC28-203ENST00000442232 WBP1Q96G27 269 aa11.76□□□□□ -0.53
TTC28-203ENST00000442232 MCCC1Q96RQ3 725 aaPredicted RBP11.76□□□□□ -0.53
TTC28-203ENST00000442232 CCNL2Q96S94 520 aaPredicted RBP11.76□□□□□ -0.53
TTC28-203ENST00000442232 SEMA3CQ99985 751 aa11.76□□□□□ -0.53
TTC28-203ENST00000442232 TEX101Q9BY14 249 aa11.76□□□□□ -0.53
TTC28-203ENST00000442232 TRNAU1APQ9NX07 287 aaKnown RBP11.76□□□□□ -0.53
TTC28-203ENST00000442232 SEPT10Q9P0V9 454 aa11.76□□□□□ -0.53
TTC28-203ENST00000442232 CTTNBP2NLQ9P2B4 639 aa11.76□□□□□ -0.53
TTC28-203ENST00000442232 ATXN7L1Q9ULK2 861 aaPredicted RBP11.76□□□□□ -0.53
TTC28-203ENST00000442232 CAPN11Q9UMQ6 739 aa11.76□□□□□ -0.53
TTC28-203ENST00000442232 A0A087X0T9 212 aa11.75□□□□□ -0.53
TTC28-203ENST00000442232 K7ENP7 123 aa11.75□□□□□ -0.53
TTC28-203ENST00000442232 CASC3O15234 703 aaKnown RBP11.75□□□□□ -0.53
TTC28-203ENST00000442232 MFSD11O43934 449 aa11.75□□□□□ -0.53
TTC28-203ENST00000442232 PEX11BO96011 259 aa11.75□□□□□ -0.53
TTC28-203ENST00000442232 KRT7P08729 469 aa11.75□□□□□ -0.53
TTC28-203ENST00000442232 FAM228BP0C875 321 aa11.75□□□□□ -0.53
TTC28-203ENST00000442232 HGFP14210 728 aa11.75□□□□□ -0.53
TTC28-203ENST00000442232 MX2P20592 715 aa11.75□□□□□ -0.53
TTC28-203ENST00000442232 LHCGRP22888 699 aa11.75□□□□□ -0.53
TTC28-203ENST00000442232 SLC5A2P31639 672 aa11.75□□□□□ -0.53
TTC28-203ENST00000442232 GARSP41250 739 aaKnown RBP11.75□□□□□ -0.53
TTC28-203ENST00000442232 MAPK10P53779 464 aa11.75□□□□□ -0.53
TTC28-203ENST00000442232 MAZP56270 477 aaKnown RBP11.75□□□□□ -0.53
TTC28-203ENST00000442232 SKOR1P84550 965 aa11.75□□□□□ -0.53
TTC28-203ENST00000442232 CDK3Q00526 305 aa11.75□□□□□ -0.53
TTC28-203ENST00000442232 MMRN1Q13201 1228 aa11.75□□□□□ -0.53
TTC28-203ENST00000442232 CLN3Q13286 438 aa11.75□□□□□ -0.53
TTC28-203ENST00000442232 PDK2Q15119 407 aa11.75□□□□□ -0.53
TTC28-203ENST00000442232 IFI16Q16666 785 aaKnown RBP11.75□□□□□ -0.53
TTC28-203ENST00000442232 AMZ1Q400G9 498 aa11.75□□□□□ -0.53
TTC28-203ENST00000442232 TMEM164Q5U3C3 297 aa11.75□□□□□ -0.53
TTC28-203ENST00000442232 TXNRD3NBQ6F5E7 133 aa11.75□□□□□ -0.53
TTC28-203ENST00000442232 INO80CQ6PI98 192 aaPredicted RBP11.75□□□□□ -0.53
TTC28-203ENST00000442232 SLC30A9Q6PML9 568 aa11.75□□□□□ -0.53
TTC28-203ENST00000442232 Q6ZVL8 140 aa11.75□□□□□ -0.53
TTC28-203ENST00000442232 HSD11B1LQ7Z5J1 315 aa11.75□□□□□ -0.53
TTC28-203ENST00000442232 ZNF605Q86T29 641 aa11.75□□□□□ -0.53
TTC28-203ENST00000442232 PIM3Q86V86 326 aa11.75□□□□□ -0.53
TTC28-203ENST00000442232 PELI3Q8N2H9 469 aa11.75□□□□□ -0.53
TTC28-203ENST00000442232 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.75□□□□□ -0.53
TTC28-203ENST00000442232 CCL4L1Q8NHW4 92 aa11.75□□□□□ -0.53
TTC28-203ENST00000442232 GPBAR1Q8TDU6 330 aa11.75□□□□□ -0.53
TTC28-203ENST00000442232 AP2M1Q96CW1 435 aa11.75□□□□□ -0.53
TTC28-203ENST00000442232 NSMCE3Q96MG7 304 aa11.75□□□□□ -0.53
TTC28-203ENST00000442232 OR2M4Q96R27 311 aa11.75□□□□□ -0.53
TTC28-203ENST00000442232 ZNF670Q9BS34 389 aa11.75□□□□□ -0.53
TTC28-203ENST00000442232 FRMD8Q9BZ67 464 aaPredicted RBP11.75□□□□□ -0.53
TTC28-203ENST00000442232 DEF6Q9H4E7 631 aa11.75□□□□□ -0.53
TTC28-203ENST00000442232 TAAR2Q9P1P5 351 aa11.75□□□□□ -0.53
TTC28-203ENST00000442232 UVRAGQ9P2Y5 699 aa11.75□□□□□ -0.53
TTC28-203ENST00000442232 AMACRQ9UHK6 382 aa11.75□□□□□ -0.53
TTC28-203ENST00000442232 SUFUQ9UMX1 484 aa11.75□□□□□ -0.53
TTC28-203ENST00000442232 PCDHB11Q9Y5F2 797 aa11.75□□□□□ -0.53
TTC28-203ENST00000442232 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.75□□□□□ -0.53
TTC28-203ENST00000442232 AGRPO00253 132 aa11.74□□□□□ -0.53
TTC28-203ENST00000442232 MATN3O15232 486 aa11.74□□□□□ -0.53
TTC28-203ENST00000442232 NVLO15381 856 aaKnown RBP11.74□□□□□ -0.53
TTC28-203ENST00000442232 CPNE6O95741 557 aa11.74□□□□□ -0.53
TTC28-203ENST00000442232 CEACAM5P06731 702 aa11.74□□□□□ -0.53
TTC28-203ENST00000442232 IVLP07476 585 aa11.74□□□□□ -0.53
TTC28-203ENST00000442232 TPM1P09493 284 aa11.74□□□□□ -0.53
TTC28-203ENST00000442232 H2AFZP0C0S5 128 aa11.74□□□□□ -0.53
TTC28-203ENST00000442232 LIPCP11150 499 aa11.74□□□□□ -0.53
TTC28-203ENST00000442232 PTMSP20962 102 aa11.74□□□□□ -0.53
TTC28-203ENST00000442232 ALDH4A1P30038 563 aa11.74□□□□□ -0.53
TTC28-203ENST00000442232 PBX1P40424 430 aa11.74□□□□□ -0.53
TTC28-203ENST00000442232 ACTR1BP42025 376 aa11.74□□□□□ -0.53
TTC28-203ENST00000442232 ACTR1AP61163 376 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms