RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 TBC1D21Q8IYX1 336 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 UNC5BQ8IZJ1 945 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 BANPQ8N9N5 519 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 PCDH19Q8TAB3 1148 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 CLP1Q92989 425 aaKnown RBP6.4□□□□□ -1.39
CNOT1-202ENST00000441024 PCED1BQ96HM7 432 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 NUSAP1Q9BXS6 441 aaKnown RBP6.4□□□□□ -1.39
CNOT1-202ENST00000441024 RIBC2Q9H4K1 309 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 GOLGA2P5Q9HBQ8 144 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 PNPLA3Q9NST1 481 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 ARL8BQ9NVJ2 186 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 PSMD13Q9UNM6 376 aa6.4□□□□□ -1.39
CNOT1-202ENST00000441024 ZNF536O15090 1300 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 NRP2O60462 931 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 PLIN3O60664 434 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 KRT36O76013 467 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 LRIG2O94898 1065 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 GRIA3P42263 894 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 RPL5P46777 297 aaKnown RBP6.39□□□□□ -1.39
CNOT1-202ENST00000441024 ST13P50502 369 aaKnown RBP6.39□□□□□ -1.39
CNOT1-202ENST00000441024 CLCNKBP51801 687 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 SLC16A1P53985 500 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 GNA12Q03113 381 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 PDK3Q15120 406 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 SWT1Q5T5J6 900 aaKnown RBP6.39□□□□□ -1.39
CNOT1-202ENST00000441024 SDHAF4Q5VUM1 108 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 ANKRD22Q5VYY1 191 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 CES5AQ6NT32 575 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 ZDHHC24Q6UX98 284 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 B3GNT6Q6ZMB0 384 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 OTOP3Q7RTS5 596 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 PIGWQ7Z7B1 504 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 CMC1Q7Z7K0 106 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 TTC7BQ86TV6 843 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 RNF148Q8N7C7 305 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 CDYL2Q8N8U2 506 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 WDR60Q8WVS4 1066 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 DPF3Q92784 378 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 FAM84AQ96KN4 292 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 TEKT5Q96M29 485 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 FCRL5Q96RD9 977 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 EPB41L4BQ9H329 900 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 ZFYVE1Q9HBF4 777 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 MSRAQ9UJ68 235 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 SLC12A4Q9UP95 1085 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 RAI2Q9Y5P3 530 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 COPG1Q9Y678 874 aaKnown RBP6.39□□□□□ -1.39
CNOT1-202ENST00000441024 PARP14Q460N5 1801 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 DICER1Q9UPY3 1922 aaKnown RBP6.39□□□□□ -1.39
CNOT1-202ENST00000441024 MED26O95402 600 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 CXCL14O95715 111 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 KCNE1P15382 129 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 C4BPBP20851 252 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 EPHA3P29320 983 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 TALDO1P37837 337 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 SPAM1P38567 509 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 TMED10P49755 219 aaKnown RBP6.39□□□□□ -1.39
CNOT1-202ENST00000441024 RPL38P63173 70 aaKnown RBP6.39□□□□□ -1.39
CNOT1-202ENST00000441024 ELP6Q0PNE2 266 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 DUSP4Q13115 394 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 TARBP2Q15633 366 aaKnown RBP6.39□□□□□ -1.39
CNOT1-202ENST00000441024 XKR6Q5GH73 641 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 RAET1GQ6H3X3 334 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 FUT10Q6P4F1 479 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 TNS4Q8IZW8 715 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 ASZ1Q8WWH4 475 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 UPF1Q92900 1129 aaKnown RBP eCLIP6.39□□□□□ -1.397e-7■□□□□ 10.3
CNOT1-202ENST00000441024 KLHL5Q96PQ7 755 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 C1orf50Q9BV19 199 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 HIPK3Q9H422 1215 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 BRD9Q9H8M2 597 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 BPIFA1Q9NP55 256 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 INTS10Q9NVR2 710 aaKnown RBP6.39□□□□□ -1.39
CNOT1-202ENST00000441024 ZNF232Q9UNY5 417 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 GLYATL1P3A0A0U1RQE8 302 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 DHRS12A0PJE2 317 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 ADAMTS3O15072 1205 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 BUD23O43709 281 aaKnown RBP6.39□□□□□ -1.39
CNOT1-202ENST00000441024 DLGAP3O95886 979 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 UMPSP11172 480 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 UQCRBP14927 111 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 MYL12AP19105 171 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 GABRR2P28476 465 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 CORO1AP31146 461 aaKnown RBP6.39□□□□□ -1.39
CNOT1-202ENST00000441024 CCL23P55773 120 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 ZNF33AQ06730 810 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 PPIDQ08752 370 aaKnown RBP6.39□□□□□ -1.39
CNOT1-202ENST00000441024 SLC44A4Q53GD3 710 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 ARMC3Q5W041 872 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 CDC73Q6P1J9 531 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 TRIM40Q6P9F5 258 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 ECHDC2Q86YB7 292 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 CLVS1Q8IUQ0 354 aaPredicted RBP6.39□□□□□ -1.39
CNOT1-202ENST00000441024 PGAM4Q8N0Y7 254 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 SFRP1Q8N474 314 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 ZBTB2Q8N680 514 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 BEND7Q8N7W2 519 aaPredicted RBP6.39□□□□□ -1.39
CNOT1-202ENST00000441024 LEMD2Q8NC56 503 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 OR52K2Q8NGK3 314 aa6.39□□□□□ -1.39
CNOT1-202ENST00000441024 GRIN3AQ8TCU5 1115 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms